prot_H-paniculata_contig10672.434.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig10672.434.1
Unique Name	prot_H-paniculata_contig10672.434.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	99

Homology

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: D8LGB6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB6_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.150e-50
Identity = 89/99 (89.90%), Postives = 92/99 (92.93%), Query Frame = 0

Query:    1 MLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            MLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQ     DQYANYVIQKTLQ APRDAALTLVESIREHL LMRNSSGGRRMLT+I+KRFP
Sbjct:   80 MLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ-----DQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP 173

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.320e-48
Identity = 90/99 (90.91%), Postives = 92/99 (92.93%), Query Frame = 0

Query:    1 MLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            MLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQ     DQYANYVIQKTLQ APRDAALTLVESIREHL LMRNSSGGRRMLT+I+KRFP
Sbjct:  398 MLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQ-----DQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP 491

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: A0A7S2XV53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV53_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.230e-23
Identity = 47/98 (47.96%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNV+EKC+++A++ ++   + E+++P+++  LL      DQ+ANYV+Q++L  AP   A  LV++I+ HLP +RN+SGGRR++ KI KRFP
Sbjct:  177 LSIQKFSSNVVEKCLEKANDRLLNLMISEISNPSSLAELL-----NDQFANYVVQRSLVVAPHAVATELVDNIKPHLPQLRNTSGGRRIIAKILKRFP 269

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: A0A4D9CTA7_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTA7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 7.540e-23
Identity = 51/98 (52.04%), Postives = 71/98 (72.45%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QK+SSNV+EKC+++ASE+I   Y+ E+  P  ++ L+Q     DQYANYV+Q+ L  A     L LVE++R HL  MRN++GGRR+L+KI KRFP
Sbjct: 1037 LSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQ-----DQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFP 1129

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: A0A8K1C9G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL)

HSP 1 Score: 93.6 bits (231), Expect = 3.750e-20
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNVIEKC+++A   ++ +Y+ E+     M+ +LQ     DQ+ANYV+Q+ L  A  D  L LV++IR HL  M+N+SGGRR+  +I KRFP
Sbjct:  807 LSIQKFSSNVIEKCLEKAPPVVLTQYIDEITTCPKMQKMLQ-----DQFANYVVQRALCVASEDQCLALVKAIRPHLVAMKNTSGGRRITARILKRFP 899

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: K3W6G7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6G7_GLOUD)

HSP 1 Score: 93.6 bits (231), Expect = 3.770e-20
Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNVIEKC+++A E +   Y+ EL +   M  +LQ     DQ+ANYV+Q+ L     +  L LV+SIR HL +M+N+SGGRR+  +I KRFP
Sbjct:  873 LSIQKFSSNVIEKCLEKAPERVRQNYIKELINCPKMNKMLQ-----DQFANYVVQRALCVCSEEQCLQLVKSIRPHLAMMKNTSGGRRITARILKRFP 965

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: A0A3M6VTZ0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTZ0_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.140e-20
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNVIEKC+++A E +  KY+ E+ + + M  +LQ     DQ+ANYV+Q+ L     +  L LV++IR HL  M+N+SGGRR+  +I KRFP
Sbjct:  870 LSVQKFSSNVIEKCLEKAPERVRQKYIAEITNCSKMNKMLQ-----DQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFP 962

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: M4BTR1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTR1_HYAAE)

HSP 1 Score: 93.2 bits (230), Expect = 5.150e-20
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQ     DQ+ANYV+Q+ L     +  L LV++IR HL  MRN+SGGRR+  +I KRFP
Sbjct:  908 LSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ-----DQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMRNTSGGRRITARILKRFP 1000

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: H3GN50_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GN50_PHYRM)

HSP 1 Score: 92.4 bits (228), Expect = 9.550e-20
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQ     DQ+ANYV+Q+ L     +  L LV++IR HL  M+N+SGGRR+  +I KRFP
Sbjct:  784 LSVQKFSSNVIEKCLEKAPERVRQKYISEITSCPKMNKMLQ-----DQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFP 876

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BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Match: V9FR80_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9FR80_PHYPR)

HSP 1 Score: 92.4 bits (228), Expect = 9.560e-20
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0

Query:    2 LSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQYANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP 99
            LS+QKFSSNVIEKC+++A E +  KY+ E+ +   M  +LQ     DQ+ANYV+Q+ L     +  L LV++IR HL  M+N+SGGRR+  +I KRFP
Sbjct:  809 LSVQKFSSNVIEKCLEKAPERVRQKYIAEITNCPKMNKMLQ-----DQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFP 901

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig10672.434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LGB6_ECTSI	1.150e-50	89.90	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K3P5_9PHAE	9.320e-48	90.91	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A7S2XV53_9STRA	4.230e-23	47.96	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A4D9CTA7_9STRA	7.540e-23	52.04	PUM-HD domain-containing protein n=2 Tax=Monodopsi...	[more]
A0A8K1C9G3_PYTOL	3.750e-20	48.98	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3W6G7_GLOUD	3.770e-20	50.00	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A3M6VTZ0_9STRA	5.140e-20	48.98	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
M4BTR1_HYAAE	5.150e-20	50.00	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
H3GN50_PHYRM	9.550e-20	48.98	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
V9FR80_PHYPR	9.560e-20	48.98	Uncharacterized protein n=12 Tax=Phytophthora TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..98 e-value: 8.6E-24 score: 86.1
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 2..91
None	No IPR available	PANTHER	PTHR12537:SF13	PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4	coord: 2..91
IPR033133	Pumilio homology domain	PROSITE	PS50303	PUM_HD	coord: 1..98 score: 19.566
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig10672	contig	H-paniculata_contig10672:367..1568 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig10672.434.1	mRNA_H-paniculata_contig10672.434.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig10672 361..1568 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig10672.434.1 ID=prot_H-paniculata_contig10672.434.1|Name=mRNA_H-paniculata_contig10672.434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
MLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQASKMTDQY
ANYVIQKTLQQAPRDAALTLVESIREHLPLMRNSSGGRRMLTKIAKRFP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR033133	PUM-HD
IPR016024	ARM-type_fold