prot_H-paniculata_contig10660.429.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10660.429.1
Unique Nameprot_H-paniculata_contig10660.429.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
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BLAST of mRNA_H-paniculata_contig10660.429.1 vs. uniprot
Match: D8LRG0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRG0_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 5.810e-15
Identity = 48/88 (54.55%), Postives = 63/88 (71.59%), Query Frame = 0 
Query:    5 SALRMLTVGAAALSATPGSNASL--SAMDLLQSTQNPRRQQIVSKQDIYLEDRSAGRLQNTK-EHLAPSTV-DKWQGFYAAEVAAFSC 88
            SA++ +T    A +A P + AS   S +DLL +     + Q V+KQDI+LE+RSAGRLQNT+ EHLAPS   D+WQG+Y+AEVAAFSC
Sbjct:    4 SAIKCITAATLAFAA-PSAAASRNGSGLDLLHNVGG--KNQRVAKQDIWLEERSAGRLQNTRQEHLAPSIFFDQWQGYYSAEVAAFSC 88
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10660.429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRG0_ECTSI5.810e-1554.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10660contigH-paniculata_contig10660:3352..4359 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10660.429.1mRNA_H-paniculata_contig10660.429.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10660 3255..5754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10660.429.1 ID=prot_H-paniculata_contig10660.429.1|Name=mRNA_H-paniculata_contig10660.429.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
MTGNSALRMLTVGAAALSATPGSNASLSAMDLLQSTQNPRRQQIVSKQDI
YLEDRSAGRLQNTKEHLAPSTVDKWQGFYAAEVAAFSC*
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