prot_H-paniculata_contig1066.428.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1066.428.1
Unique Nameprot_H-paniculata_contig1066.428.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: D7FQ30_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ30_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.320e-50
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            MSDEMCQFALETSQEAFQLTI+KGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFT+VPGVYVLLWR
Sbjct:   13 MSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A6H5JF01_9PHAE (Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF01_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 4.350e-50
Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            MSDEMC FALETSQEAFQLTI+KGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFT+VPGVYVLLWR
Sbjct:   13 MSDEMCHFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A836CC04_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC04_9STRA)

HSP 1 Score: 143 bits (360), Expect = 6.320e-43
Identity = 64/80 (80.00%), Postives = 76/80 (95.00%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            M+D+MCQFAL+TS+EAF LTI+KGQVFT IAS IR+ FEK+YGRGWNVVVGR+FGAYVTHEIKTYMYFT++PGVYVL+W+
Sbjct:   13 MTDDMCQFALKTSEEAFHLTINKGQVFTAIASYIRRTFEKTYGRGWNVVVGRAFGAYVTHEIKTYMYFTVIPGVYVLIWK 92          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A482S6R4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6R4_9ARCH)

HSP 1 Score: 107 bits (266), Expect = 3.810e-28
Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            MS+E  + A++ +++AF LTI+ G V +TIA  IRK F++ + RGWN +VGRSFGAYVTHEIKTY+YFT+ PG YVLLW+
Sbjct:   49 MSEEWSKDAIKAARDAFALTIASGDVHSTIADFIRKKFDRDHERGWNCIVGRSFGAYVTHEIKTYIYFTVQPGTYVLLWK 128          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A485KYL8_9STRA (Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KYL8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.050e-26
Identity = 45/80 (56.25%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            M+D M +  + T+++AFQL ++ G+ F+TIA  +R+  EK YGRGWN +VG SFGAYVTHEIKTY+YF++  GV VL+WR
Sbjct:   18 MTDVMLEKVVATAKDAFQLQVASGKTFSTIAEFVRRNMEKEYGRGWNCIVGLSFGAYVTHEIKTYVYFSVASGVSVLVWR 97          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A7S4E7C9_9STRA (Dynein light chain n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7C9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.560e-26
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            MS+E   F LE + +AF     +G+V++ +A+ IR A EK YG+GWNVVVG+SFGA+VTHEIKTY Y ++VPGV VL+WR
Sbjct:   13 MSEEKVDFCLEIATDAFNQASFQGKVYSYVANFIRAALEKQYGKGWNVVVGKSFGAFVTHEIKTYFYGSVVPGVCVLIWR 92          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A0P1AY91_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY91_PLAHL)

HSP 1 Score: 99.4 bits (246), Expect = 1.790e-25
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            M+D M    L T+++AFQL ++  + F+TIA  +R+  EK YGRGWN VVG SFGAYVTHEIKTY+YF++  GV VL+W+
Sbjct:   19 MTDAMLDKVLSTAKDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAIGVSVLVWK 98          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A7S3H299_9STRA (Dynein light chain n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H299_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.220e-25
Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            MS+E  + A + +++AF +TIS G   +TIA  IRK F+  +  GWN +VGRSFGAYVTHEIKTY YF++ PG YVLLWR
Sbjct:   37 MSEEWARDAQKIARDAFAITISSGDAHSTIADFIRKKFDVGHMAGWNCIVGRSFGAYVTHEIKTYTYFSVQPGTYVLLWR 116          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: H3HCG0_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3HCG0_PHYRM)

HSP 1 Score: 96.3 bits (238), Expect = 2.640e-24
Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVL 77
            M+D M + AL T+++AFQL ++  + F+TIA  +R+  EK YGRGWN VVG SFGAYVTHEIKTY+YF++  GV VL
Sbjct:   19 MTDAMLEKALGTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVL 95          
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Match: A0A225VFG7_9STRA (Dynein light chain n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VFG7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.780e-24
Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = 0
Query:    1 MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTMVPGVYVLLWR 80
            M+D M + AL T+++AFQL ++  + F+TIA  +R+  EK YGRGWN VVG SFGAYVTHEIKTY+YF++  GV VL+W+
Sbjct:   19 MTDVMLEKALSTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVLVWK 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1066.428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ30_ECTSI2.320e-5097.50Dynein light chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JF01_9PHAE4.350e-5096.25Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A836CC04_9STRA6.320e-4380.00Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A482S6R4_9ARCH3.810e-2860.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A485KYL8_9STRA1.050e-2656.25Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4... [more]
A0A7S4E7C9_9STRA9.560e-2657.50Dynein light chain n=1 Tax=Pelagomonas calceolata ... [more]
A0A0P1AY91_PLAHL1.790e-2556.25Dynein light chain n=1 Tax=Plasmopara halstedii Ta... [more]
A0A7S3H299_9STRA4.220e-2557.50Dynein light chain n=1 Tax=Spumella elongata TaxID... [more]
H3HCG0_PHYRM2.640e-2458.44Dynein light chain n=21 Tax=Oomycota TaxID=4762 Re... [more]
A0A225VFG7_9STRA4.780e-2457.50Dynein light chain n=1 Tax=Phytophthora megakarya ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..80
e-value: 4.6E-16
score: 69.4
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 1..80
e-value: 1.3E-22
score: 79.9
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..80
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..80
e-value: 8.9E-23
score: 82.3
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 1..80
NoneNo IPR availablePANTHERPTHR11886:SF64coord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1066contigH-paniculata_contig1066:8681..9865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1066.428.1mRNA_H-paniculata_contig1066.428.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1066 8681..9880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1066.428.1 ID=prot_H-paniculata_contig1066.428.1|Name=mRNA_H-paniculata_contig1066.428.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MSDEMCQFALETSQEAFQLTISKGQVFTTIASCIRKAFEKSYGRGWNVVV
GRSFGAYVTHEIKTYMYFTMVPGVYVLLWR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf