prot_H-paniculata_contig10647.421.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10647.421.1
Unique Nameprot_H-paniculata_contig10647.421.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.030e-30
Identity = 81/179 (45.25%), Postives = 103/179 (57.54%), Query Frame = 0
Query:    1 MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLSASPRKTWKRTTEGKSPLGKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEV-FFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            ML+LF S V +KE D IP  E++FYIF  GLLWREVLEF +G+P          RT EG    G+ +  +  +  G       NR+ +A  RY+F+DTWN +DT TI  IF AF  R++                 ++F +E   F A+ F A  APLLFSRLL LSQID+TLGPMTQV
Sbjct:  894 MLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEG----GRVEPGISHLGAGSNF----NRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMI-----------------ARFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQV 1047          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.870e-30
Identity = 79/186 (42.47%), Postives = 108/186 (58.06%), Query Frame = 0
Query:    1 MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLSASPRKTWKRTTEGKSP------LGKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGV--GWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            ML LF SCV +++S  IP  E+ FY+F  G LWRE+LEF +G+P      +  K   EG          G + K    +  G    ++  RV++A+ RYLF+DTWN+LDTLT+  +F AF  R++G+    G T+  D             FF+A+ FLA  APLLF+RLL LSQID+TLGPM Q+
Sbjct: 1004 MLGLFCSCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLK--RVASAITRYLFYDTWNLLDTLTLSTVFLAFVFRLLGIREFGGPTDPGD------------YFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQI 1175          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 3.180e-29
Identity = 82/189 (43.39%), Postives = 104/189 (55.03%), Query Frame = 0
Query:    1 MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLSA-SPRKTWKRTTEGKSPLGKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQVSDGGRLSCHT 188
            ML+LF   V +KE D+IP  E+ FY+F  GLLWRE+LEF +G+P     P K      +G +  G  +   F  +       R NR+ +A  RY+F+DTWN LDT TI  I  AF  R++ L       DD+             F A+ F A  APLLFSRLL LSQID+TLGPMTQV    R+  HT
Sbjct: 1020 MLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIAL-------DDKF----------FLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVI--WRMMSHT 1189          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 4.820e-28
Identity = 79/181 (43.65%), Postives = 101/181 (55.80%), Query Frame = 0
Query:    1 MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLSASPRKTWKRTTEGKSPL--GKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEV-FFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            ML+LF S V +KE D IP  E++FYIF  GLLWREVLEF +G+P          R + G  P   G+ K  +  +  G       NR+ +A  RY+F+DTWN +D  TI  I  AF  R++                 ++F +E   F A+ F A  APLLFSRLL LSQID+TLGPMTQV
Sbjct:  262 MLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRH------RISRGLGPEVGGRVKPGISHLGAGSNF----NRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRMI-----------------ARFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQV 415          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.760e-27
Identity = 76/184 (41.30%), Postives = 105/184 (57.07%), Query Frame = 0
Query:    1 MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLSASPRKTWKRTTEGKSPLGK---AKKWVFTI---VLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            ML LF +CV +++S  IP  E+ FY+F  G LWRE+LEF +G+P  A  R+                 A +W  +     + +       RV++A+ RYLF+DTWN+LDTLT+  +F AF  R++G+             G      + FF+A+ FLAA APLLF+RLL LSQIDSTLGPM Q+
Sbjct: 1006 MLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVP--ARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIR----------EFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQI 1177          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 3.370e-25
Identity = 69/186 (37.10%), Postives = 103/186 (55.38%), Query Frame = 0
Query:    1 MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLS--------ASPRKTWKRTTEGKSPLGKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            ML L+ S V+++ SD IP  EI+FY+F  GLL+RE+LEF + LP S        +SP      + +G+         +          + + RV++ ++RY   D WNILDT +I  +  AF  RI+     + +    I    +    + FF+AR  LAAIAPLLF+R+L L+Q+D+T GPMTQ+
Sbjct: 1302 MLGLYWSSVAIQYSDIIPADEILFYLFAAGLLFREILEFRDALPPSVSSSSSPTSSPSDATMSSDDGEDHGSSEPDSLAARAREERSGLSQRRVTSGLRRYFSKDNWNILDTASIFCVMLAFIFRIIAYIADFAQAATTIL--GNTLIGQAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQI 1485          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.550e-14
Identity = 64/165 (38.79%), Postives = 78/165 (47.27%), Query Frame = 0
Query:   25 YIFGLGLLWREVLEFWEGLPLSA-SPRKTWKRTTEGKSPLGKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQVSDGGRLSCHT 188
            + F  GLLWRE+LEF  G+P     P K      E  +  G  +      +       R NR+ +     +F+DTW  LDT TI  I  AF  R+  L       DD+             F AR F A  AP LFSRLL LSQID+TLGPMTQV    R+  HT
Sbjct:  381 HTFYKGLLWREILEFRNGVPARRHKPPKRQVPKNEDNTRAGSEQSLSSPRISRPGTRNRFNRIVSTFTWNVFYDTWKFLDTPTIGCILVAFIFRVTTL-------DDKF----------FLFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQVI--WRMMSHT 526          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 6.610e-11
Identity = 43/86 (50.00%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   93 YLFHDTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            Y+F+DTWN LDT TI  +   F  R++ L       DD+             F A+ F AA APLLFSRLL LSQID+TLGPMTQV
Sbjct: 1178 YVFYDTWNFLDTSTIGCLLVTFVFRMIAL-------DDDF----------FLFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQV 1246          
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Match: A0A6H5JJ53_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJ53_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.320e-7
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   97 DTWNILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVFLAAIAPLLFSRLLFLSQIDSTLGPMTQV 178
            + WN+++ + + L+ AAFT R+V  G       D I E       E FFLA++F A  APL FSR+LFL+QID  LG M Q+
Sbjct:  933 ELWNVVEAVLLGLVCAAFTFRMVAFG------SDVIEE-------EAFFLAQLFFAMAAPLFFSRVLFLAQIDENLGLMVQI 1001          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10647.421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LH97_ECTSI1.030e-3045.25Ankyrin Repeat Transient Receptor Potential Channe... [more]
D7FX79_ECTSI4.870e-3042.47Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LH99_ECTSI3.180e-2943.39Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JTT3_9PHAE4.820e-2843.65Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB40_9PHAE1.760e-2741.30Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FMR2_ECTSI3.370e-2537.10Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K4M1_9PHAE1.550e-1438.79Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LHA0_ECTSI6.610e-1150.00Transient Receptor Potential Channel. Partial sequ... [more]
A0A6H5JJ53_9PHAE1.320e-743.90Ion_trans domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002153Transient receptor potential channel, canonicalPANTHERPTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELcoord: 7..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 99..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10647contigH-paniculata_contig10647:679..2614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10647.421.1mRNA_H-paniculata_contig10647.421.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10647 675..2614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10647.421.1 ID=prot_H-paniculata_contig10647.421.1|Name=mRNA_H-paniculata_contig10647.421.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MLMLFVSCVSVKESDTIPIQEIVFYIFGLGLLWREVLEFWEGLPLSASPR
KTWKRTTEGKSPLGKAKKWVFTIVLGHTHAVRENRVSTAMKRYLFHDTWN
ILDTLTIVLIFAAFTARIVGLGVGWTEKDDEIAEGASKFQTEVFFLARVF
LAAIAPLLFSRLLFLSQIDSTLGPMTQVSDGGRLSCHT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002153TRPC_channel