prot_H-paniculata_contig10641.418.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10641.418.1
Unique Nameprot_H-paniculata_contig10641.418.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 2.360e-92
Identity = 143/176 (81.25%), Postives = 154/176 (87.50%), Query Frame = 0
Query:    1 MLARVSTYATRRSVAVGTGRLLSSSTTARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            M +RV+  A RR      GR++SSS  ARA A LPDL YDYGELEPAISGEIMKIHHTKHHQAYINNLNA+MEKLA AEA GDVTAI+QLQAAIKFNGGGHLNHSIFWKNLAP  KGGG+MVTGTLADMIEAQYHSM  LT+K+SAA+VGVQGSGW WLGYDK+NKRLAIATCANQ
Sbjct:    2 MFSRVACNAARR--VPSAGRMISSSAAARAPAVLPDLTYDYGELEPAISGEIMKIHHTKHHQAYINNLNAAMEKLADAEAKGDVTAILQLQAAIKFNGGGHLNHSIFWKNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQ 175          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A835YN63_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN63_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.050e-66
Identity = 108/158 (68.35%), Postives = 129/158 (81.65%), Query Frame = 0
Query:   20 RLLSSSTTARAA-ASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            +LLS+  TA A+ A+LP+LGY Y +LEP I G+IM+IHH+KHH  Y+ NLNA+M KLA AEA GDV AIVQLQ AIKFNGGGH+NHSIFWKNLAPTS GGGK+  G+L D I++Q+ S+ GL +KLSAAAVGVQGSGW WL YDK+  +LAIAT ANQ
Sbjct:   18 KLLSAGRTALASQATLPELGYGYKDLEPYIDGQIMEIHHSKHHNTYVTNLNAAMTKLADAEAKGDVGAIVQLQGAIKFNGGGHINHSIFWKNLAPTSAGGGKLECGSLKDAIDSQFGSLDGLKEKLSAAAVGVQGSGWGWLAYDKVACKLAIATTANQ 175          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S2D386_9STRA (Superoxide dismutase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D386_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.250e-63
Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 0
Query:    4 RVSTYATRRSVAVGTGRLLSSSTTARAAAS---LPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            RV++    RS+ + T +    S +  A+ S   LPDL Y YGELEP I+GEIM+IHH+KHH  Y+ NLN + EKLAAAEA GDVTA+VQLQ AIKFNGGGHLNHSIFW+NLAP SKGGG +  G LA +I+A++ S   + +K++AA V VQGSGW WLGYDK +  +A+A CANQ
Sbjct:    1 RVNSEEMMRSIVINTSKFRGISRSVSASRSIFTLPDLKYGYGELEPVITGEIMEIHHSKHHNTYVTNLNIASEKLAAAEAAGDVTAMVQLQGAIKFNGGGHLNHSIFWENLAPPSKGGGGVPEGELAALIDAKFGSFDAMKEKMTAATVAVQGSGWGWLGYDKTSGSVAVACCANQ 176          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S2SP93_9STRA (Superoxide dismutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP93_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.530e-60
Identity = 95/154 (61.69%), Postives = 117/154 (75.97%), Query Frame = 0
Query:   23 SSSTTARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            S++ ++R+  +LPDL Y YGELEP ISGEIM++HH+KHH  Y+ NLNA ME+LA AE  GDVT IVQLQ AIKFNGGGHLNHSIFW+NLAP SKGGG   TG LA +I+ ++ S   +  K++AA V VQGSGW WLGYDK +  +A+  C NQ
Sbjct:   19 STTASSRSVFTLPDLSYGYGELEPVISGEIMELHHSKHHNTYVTNLNAGMEQLAEAEHKGDVTKIVQLQQAIKFNGGGHLNHSIFWENLAPPSKGGGGEPTGELAALIDKKFGSFDAMKDKMTAATVAVQGSGWGWLGYDKASDSVAVTCCFNQ 172          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: F0YBC5_AURAN (Superoxide dismutase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC5_AURAN)

HSP 1 Score: 194 bits (492), Expect = 8.570e-59
Identity = 96/159 (60.38%), Postives = 116/159 (72.96%), Query Frame = 0
Query:   18 TGRLLSSSTTARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            T R ++  + AR   +LP L YDYG LEP ISG+IM+IHH+KHH  Y+ NLNA++E L  A A GDVTAIV  Q AIKFNGGGHLNHSIFW+NLAP S+GGG   TG LA  I+A++  +  +  KLSA  VGVQGSGW WLGY+K   +LA+ATC NQ
Sbjct:    9 TARAVALRSGARTKFTLPALSYDYGALEPVISGQIMEIHHSKHHNTYVTNLNAAVETLEQATAAGDVTAIVAAQGAIKFNGGGHLNHSIFWENLAPPSEGGGAPPTGALAAAIDAEFGGVDAMKTKLSAMTVGVQGSGWGWLGYNKATGKLALATCPNQ 167          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A022PYY3_ERYGU (Superoxide dismutase n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PYY3_ERYGU)

HSP 1 Score: 191 bits (485), Expect = 1.080e-57
Identity = 94/144 (65.28%), Postives = 111/144 (77.08%), Query Frame = 0
Query:   33 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            SLPDL Y YG+LEPAISGEIM+IHH KHHQAYI N N S+E+L AA + GD +A+V+LQAAIKFNGGGH+NHSIFWKNLAP S+GGG+    TLA  I+  + S+  L QK++A    +QGSGW WLG DK  KRL IAT ANQ
Sbjct:   26 SLPDLAYGYGDLEPAISGEIMQIHHQKHHQAYITNYNKSLEQLDAAISKGDASAVVKLQAAIKFNGGGHVNHSIFWKNLAPISEGGGEPPKSTLAMAIDNNFGSLEALIQKMNAEGAALQGSGWVWLGLDKEFKRLVIATTANQ 169          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S3DHC1_9EUKA (Superoxide dismutase n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DHC1_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 1.170e-57
Identity = 90/144 (62.50%), Postives = 109/144 (75.69%), Query Frame = 0
Query:   33 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            +LPDL YDYG LEP ISG IM++HH+KHH  Y+ NLNAS+EKL  A+ +GDV+AIVQLQ AIKFNGGGH+NHSIFWKNL    +GGG +  G L + I A + S+  L  KL+ A+ GVQGSGW WLG+D  +K L IATCANQ
Sbjct:   41 TLPDLDYDYGALEPFISGHIMELHHSKHHNTYVTNLNASLEKLEEAQKEGDVSAIVQLQQAIKFNGGGHINHSIFWKNLCSPKEGGGVLEDGALKNEINATFGSLENLQTKLNTASAGVQGSGWGWLGFDPTSKSLKIATCANQ 184          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S4M2S9_9EUKA (Superoxide dismutase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2S9_9EUKA)

HSP 1 Score: 189 bits (481), Expect = 5.360e-57
Identity = 86/144 (59.72%), Postives = 107/144 (74.31%), Query Frame = 0
Query:   33 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            +LPDL YDYG LEPA+SGEIM IHHTKHHQ Y+ NLNA+ EK+  A+A GD+ A++ LQ AIKFNGGGH+NHSIFW+NL P S+GGG +  G L+  I A++ S+     K +A    +QGSGW WLGYDK   ++ IATCANQ
Sbjct:   35 TLPDLTYDYGALEPAVSGEIMTIHHTKHHQTYVTNLNAAYEKMLDAQAKGDIDAVIALQGAIKFNGGGHVNHSIFWQNLCPISEGGGVLQDGPLSAAITAEFGSLEAFQAKFNATTAAIQGSGWGWLGYDKAADKIKIATCANQ 178          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: A0A7S3ZMS2_9STRA (Superoxide dismutase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMS2_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.900e-57
Identity = 92/149 (61.74%), Postives = 107/149 (71.81%), Query Frame = 0
Query:   28 ARAAASLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            AR  A+LP LGY+Y  LEP ISG IM++HH+KHH  Y+ N NA+ EKLA A AD DVT IV  QAAIKFNGGGHLNHSIFW+NLAP S+GGG   TG L+  I+A + S   +  KLS   V VQGSGW WLGY+K    L +ATCANQ
Sbjct:   15 ARTKATLPALGYEYSALEPVISGTIMELHHSKHHNTYVTNFNAATEKLATAVADDDVTGIVAAQAAIKFNGGGHLNHSIFWQNLAPPSEGGGAPPTGALSAAIDADFGSFDAMKTKLSQMTVAVQGSGWGWLGYNKATDALQLATCANQ 163          
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Match: F4QFT0_CAVFA (Superoxide dismutase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFT0_CAVFA)

HSP 1 Score: 189 bits (479), Expect = 1.850e-56
Identity = 89/144 (61.81%), Postives = 109/144 (75.69%), Query Frame = 0
Query:   33 SLPDLGYDYGELEPAISGEIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGGHLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVGVQGSGWAWLGYDKINKRLAIATCANQ 176
            +LPDL YDY  LEP I+GEIM+IHH KHHQAY+ NLNAS+EK AAAE+  DV A++ LQ+AIKFNGGGH+NHSIFW NLAP +  GG   +G LAD I  Q+ S+    +K +A  V +QGSGW WLGYDK N +L I++CANQ
Sbjct:   26 TLPDLPYDYKALEPVIAGEIMEIHHKKHHQAYVTNLNASLEKYAAAESAKDVAAMIGLQSAIKFNGGGHVNHSIFWTNLAPKNAQGGVSPSGPLADAINQQFGSLEKFIEKFNAQTVAIQGSGWGWLGYDKANSKLVISSCANQ 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10641.418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ23_ECTSI2.360e-9281.25Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YN63_9STRA1.050e-6668.35Superoxide dismutase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2D386_9STRA2.250e-6359.09Superoxide dismutase n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SP93_9STRA1.530e-6061.69Superoxide dismutase n=1 Tax=Rhizochromulina marin... [more]
F0YBC5_AURAN8.570e-5960.38Superoxide dismutase n=1 Tax=Aureococcus anophagef... [more]
A0A022PYY3_ERYGU1.080e-5765.28Superoxide dismutase n=1 Tax=Erythranthe guttata T... [more]
A0A7S3DHC1_9EUKA1.170e-5762.50Superoxide dismutase n=2 Tax=Palpitomonas bilix Ta... [more]
A0A7S4M2S9_9EUKA5.360e-5759.72Superoxide dismutase n=1 Tax=Prymnesium polylepis ... [more]
A0A7S3ZMS2_9STRA9.900e-5761.74Superoxide dismutase n=1 Tax=Pelagomonas calceolat... [more]
F4QFT0_CAVFA1.850e-5661.81Superoxide dismutase n=1 Tax=Cavenderia fasciculat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availablePANTHERPTHR11404SUPEROXIDE DISMUTASE 2coord: 7..176
NoneNo IPR availablePANTHERPTHR11404:SF36SUPEROXIDE DISMUTASE [MN] 2, MITOCHONDRIALcoord: 7..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..204
IPR001189Manganese/iron superoxide dismutasePRINTSPR01703MNSODISMTASEcoord: 95..108
score: 61.01
coord: 151..159
score: 75.42
coord: 56..69
score: 64.2
coord: 35..46
score: 59.56
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3D2.40.500.20coord: 113..188
e-value: 2.3E-13
score: 52.0
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILY54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 115..177
IPR019831Manganese/iron superoxide dismutase, N-terminalPFAMPF00081Sod_Fe_Ncoord: 33..112
e-value: 4.2E-31
score: 107.3
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 123..177
e-value: 4.5E-10
score: 39.6
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyGENE3D1.10.287.990coord: 49..112
e-value: 9.7E-28
score: 98.7
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilySUPERFAMILY46609Fe,Mn superoxide dismutase (SOD), N-terminal domaincoord: 30..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10641contigH-paniculata_contig10641:1197..6211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10641.418.1mRNA_H-paniculata_contig10641.418.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10641 27..6315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10641.418.1 ID=prot_H-paniculata_contig10641.418.1|Name=mRNA_H-paniculata_contig10641.418.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MLARVSTYATRRSVAVGTGRLLSSSTTARAAASLPDLGYDYGELEPAISG
EIMKIHHTKHHQAYINNLNASMEKLAAAEADGDVTAIVQLQAAIKFNGGG
HLNHSIFWKNLAPTSKGGGKMVTGTLADMIEAQYHSMSGLTQKLSAAAVG
VQGSGWAWLGYDKINKRLAIATCANQVLGAIRLSRLCICSLRTVMECLIT
RRVSFSTYFCSCMSYSIQALVIFFRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001189Mn/Fe_SOD
IPR036314SOD_C_sf
IPR019831Mn/Fe_SOD_N
IPR019832Mn/Fe_SOD_C
IPR036324Mn/Fe_SOD_N_sf