prot_H-paniculata_contig10634.414.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10634.414.1
Unique Nameprot_H-paniculata_contig10634.414.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length330
Homology
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 8.500e-84
Identity = 186/385 (48.31%), Postives = 212/385 (55.06%), Query Frame = 0
Query:    1 AEAGAGTERSHIFFDGLDNKRVHPLHQPPLCTCTGILASHTDWVTGLAAAEGRILASSSNDGTLKLWDLAATAEQTGDDTSDAEDM----------------------------GIVGDRERHEAHAGDRGGVANGRDGTRMGGALENGGARGRASTSRRRNTSSSRGPLLPRPKPLATVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMD-----------------VVEGVGXXXXXXR----GEREGY-------EENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVVS 329
            A   AG+ R     D  +++  HP  QPP   CTG+ ASHTDWVTGLA AEGRI+AS+S DGTLKLWDLAA       D    E                              G+ G   + E  AG+  G+  G  G +   A        RA                 RP  LATVAGHGDYVKCLTYA + GVLVSGGLDKRILLWDLQRM+APLM LR      G GA                     ++   G      R    G+R+G        E    W HLRDP +V +R G AAAGPNEVLELCRQNKGSV+C+  + DASLVASGGTDRMIRLLDPRAG  +AAK+CKLDGH DNVRCV+IDEGGTRVVS
Sbjct:   75 ARGSAGSGRRDDADDADEHQLQHP--QPP---CTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGG---QGEEAAGEANGLRTGMHGVQDTAA--------RAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLR-----GGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVS 438          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 8.720e-67
Identity = 127/212 (59.91%), Postives = 137/212 (64.62%), Query Frame = 0
Query:  145 RPKPLATVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLR---------------------------IDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVVS 329
            RP  LATVAGHGDYVKCLTYA + GVLVSGGLDKRILLWDLQRM+APLM LR                                           +G G       GE         W HLRDP +V +R G AAAGPNEVLELCRQNKGSV+C+  + DASLVASGGTDRMIRLLDPRAG G+AAKVCKLDGH DNVRCV+IDEGGTRVVS
Sbjct:   89 RPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXXXXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGE-------GGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVS 293          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: UPI000C1D0EB0 (WD repeat-containing protein 48-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0EB0)

HSP 1 Score: 77.8 bits (190), Expect = 1.090e-12
Identity = 56/178 (31.46%), Postives = 81/178 (45.51%), Query Frame = 0
Query:  151 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 327
            T+  H DYV CL  A     ++ SGGL   + +WDL+   AP+       EDDG  +     V G+G           G   N + LH            ++A G  E          SVY L T+   +++ SGGT++++R+ DPR G    +K  KL GH DN+R + +D  G  V
Sbjct:  121 TLRQHSDYVTCLAAAENNSNIVASGGLGGEVFIWDLEAAHAPVSKSNDAAEDDGAAS-----VNGLGSSLTNTSMRPIGSSNNIS-LHATQSQGYTP---ISAKGHKE----------SVYALATNNQGTILVSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRTLLLDSSGRLV 275          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J7H059_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7H059_CAMSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.130e-12
Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 0
Query:  151 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 328
            T+  H DYV  L  AP+   V+ SGGL   + +WDL+   AP        EDD       + V GVG         R     N+  LH+      V    +AA G  E          SVY L  +   +L+ SGGT++++R+ DPR G    +K  KL GH DNVR + +D  G  V 
Sbjct:  385 TLRQHSDYVTSLAAAPKNSNVVASGGLGGEVFIWDLEAAVAPTSKTSDATEDD-----CSNGVNGVGNSVPITSA-RTISSNNSISLHMTQSHGYVP---IAAKGHKE----------SVYALGMNDSGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTGRLVA 540          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A388M9C0_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388M9C0_CHABU)

HSP 1 Score: 79.3 bits (194), Expect = 1.400e-12
Identity = 56/177 (31.64%), Postives = 81/177 (45.76%), Query Frame = 0
Query:  151 TVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLEL---CRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGG 324
            T+  H DYVK L  A +  ++ SGGL   + +WDL+  T P+   R    D            G G               ++A    +D      R G   AG + +       + +K SVY L  + D +++ASGGT++ IR+ DPR G    AK  KL GH DN+RC+ +D  G
Sbjct:  135 TLRQHSDYVKALAAARQTNLVASGGLRCEVFVWDLEGSTVPVA--RAPMNDGASPMHDSGAYAGAGGMGVLGMPAGNSVHSSSA----QD------RSGCMGAGYSAITRTPVAFKGHKESVYALAMNDDGTVLASGGTEKAIRIWDPRTG----AKQMKLKGHSDNIRCLLLDPAG 295          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J9MVX9_GOSSC (Uncharacterized protein (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9MVX9_GOSSC)

HSP 1 Score: 75.1 bits (183), Expect = 2.340e-11
Identity = 58/184 (31.52%), Postives = 81/184 (44.02%), Query Frame = 0
Query:  151 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDD-----GGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 328
            T+  H DYV CL  A     V+ SGGL   + +WD++    PL       EDD      G A ++ V              R     N+   H       V    +AA G  E          SVY L  + + SL+ SGGT++++R+ DPR G    +K  KL GH DNVR + +D  G ++V
Sbjct:  126 TLRQHSDYVTCLAAAERNANVVASGGLGGEVFVWDIEAAVTPLSKSSDVMEDDCSNGINGSANSLPVSS-----------LRPISSNNSITAHTTQCPGYVP---IAAKGHKE----------SVYALAMNDNGSLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTGRKLV 281          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A2G9H468_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H468_9LAMI)

HSP 1 Score: 73.6 bits (179), Expect = 2.950e-11
Identity = 53/181 (29.28%), Postives = 81/181 (44.75%), Query Frame = 0
Query:  149 LATVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAA-GPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 327
            + T   H DYV CL  A +    L SGGL   + +WDL+    PL      + +D  G        G+G               N +   +   + + + P  +   GP       + +K SVY L T+   +L+ SGGT++++R+ DPR G    +K  KL GH DN+R + +D  G  V
Sbjct:  119 IRTFRQHSDYVTCLAAADKNSNFLASGGLGGEVFIWDLEAALTPL-----SKSNDANGDDCSTSTNGLGSSLP-----------NTSLRPISSSNNISVHPTQSQGYGPIAA----KGHKESVYALATNDRGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNIRALLLDSTGRFV 275          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J9AWI9_9ROSI (Uncharacterized protein (Fragment) n=1 Tax=Gossypium laxum TaxID=34288 RepID=A0A7J9AWI9_9ROSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.290e-11
Identity = 54/175 (30.86%), Postives = 75/175 (42.86%), Query Frame = 0
Query:  151 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGG 324
            T+  H DYV CL  A     V+ SGGL   + +WD++    PL       EDD           G+            G   +     LR  S            P  V    + +K SVY L  + + SL+ SGGT++++R+ DPR G    +K  KL GH DNVR + +D  G
Sbjct:   13 TLRQHSDYVTCLAAAERNANVVASGGLGGEVFVWDIEAAVTPLSKSSDVMEDD--------CSNGI-----------NGSANSLPISSLRPISSNNSITAHTTQCPGYVPIAAKGHKESVYALAMNDNGSLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTG 164          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A453K871_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K871_AEGTS)

HSP 1 Score: 73.6 bits (179), Expect = 6.200e-11
Identity = 55/183 (30.05%), Postives = 80/183 (43.72%), Query Frame = 0
Query:  151 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPL---MTLRIDQEDDGGGARAMDVVEGVGXXXXXX--RGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 327
            T+  H DYV CL  A +   ++ SGGL   + +WDL    AP+   +  + D+  +G    A+  +  V          G+  GY   AA  H                            K SVY LD +   +L+ SGGT++++R+ DPR G    +K  KL GH DN+R + ID  G  V
Sbjct:  232 TLRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAAIAPIAKSVDAKEDEVPNGNSGPALSTLCNVNSSGNIVSTNGKSHGYSPIAAKGH----------------------------KDSVYALDMNDTGTLLVSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRALLIDSTGRFV 382          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: UPI000F60783A (WD repeat-containing protein 48 homolog n=1 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F60783A)

HSP 1 Score: 72.4 bits (176), Expect = 7.000e-11
Identity = 57/181 (31.49%), Postives = 81/181 (44.75%), Query Frame = 0
Query:  149 LATVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 328
            + T+  H DYV CL  A +   ++ SGGL   + +WDL+   AP        EDD       + V G G         R     N+  LH       V    +AA G  E          SVY L  +   +L+ SGGT++++R+ DPR G    +K  KL GH DN+R + +D  G  V+
Sbjct:  123 VRTLRQHTDYVTCLAAAEKNSNIVASGGLGGEVFIWDLETALAPHSKSSDATEDD-----CSNGVCGSGSSLPVSL--RPINSSNSISLHTTQSQGYVP---IAAKGHKE----------SVYALAMNESGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNIRTLLLDSTGRFVL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE8.500e-8448.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ3_ECTSI8.720e-6759.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI000C1D0EB01.090e-1231.46WD repeat-containing protein 48-like n=1 Tax=Olea ... [more]
A0A7J7H059_CAMSI1.130e-1233.52Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
A0A388M9C0_CHABU1.400e-1231.64Uncharacterized protein n=2 Tax=Chara braunii TaxI... [more]
A0A7J9MVX9_GOSSC2.340e-1131.52Uncharacterized protein (Fragment) n=2 Tax=Gossypi... [more]
A0A2G9H468_9LAMI2.950e-1129.28Uncharacterized protein n=1 Tax=Handroanthus impet... [more]
A0A7J9AWI9_9ROSI3.290e-1130.86Uncharacterized protein (Fragment) n=1 Tax=Gossypi... [more]
A0A453K871_AEGTS6.200e-1130.05Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
UPI000F60783A7.000e-1131.49WD repeat-containing protein 48 homolog n=1 Tax=Co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 55..69
score: 44.08
coord: 171..185
score: 37.84
coord: 281..295
score: 31.44
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 255..294
e-value: 0.038
score: 23.1
coord: 145..184
e-value: 5.5E-8
score: 42.5
coord: 30..68
e-value: 3.2E-6
score: 36.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 32..68
e-value: 6.5E-4
score: 20.5
coord: 267..292
e-value: 0.017
score: 16.0
coord: 147..184
e-value: 6.4E-5
score: 23.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 37..69
score: 11.778
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 152..186
score: 14.285
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 243..329
e-value: 1.4E-10
score: 42.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 27..124
e-value: 1.3E-9
score: 39.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 128..205
e-value: 3.6E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 262..329
coord: 32..187
NoneNo IPR availablePANTHERPTHR19848:SF4E3 UBIQUITIN-PROTEIN LIGASE TRAF7coord: 262..329
coord: 32..187
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 171..185
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 55..69
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 152..193
score: 13.106
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 262..329
score: 9.599
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 37..77
score: 10.97
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 31..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10634contigH-paniculata_contig10634:5305..8310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10634.414.1mRNA_H-paniculata_contig10634.414.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10634 5305..8310 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10634.414.1 ID=prot_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp
AEAGAGTERSHIFFDGLDNKRVHPLHQPPLCTCTGILASHTDWVTGLAAA
EGRILASSSNDGTLKLWDLAATAEQTGDDTSDAEDMGIVGDRERHEAHAG
DRGGVANGRDGTRMGGALENGGARGRASTSRRRNTSSSRGPLLPRPKPLA
TVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQE
DDGGGARAMDVVEGVGGGGGGGRGEREGYEENAAWLHLRDPSKVVMRPGV
AAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVG
RAAKVCKLDGHRDNVRCVRIDEGGTRVVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf