prot_H-paniculata_contig1058.378.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1058.378.1
Unique Nameprot_H-paniculata_contig1058.378.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
BLAST of mRNA_H-paniculata_contig1058.378.1 vs. uniprot
Match: D7FTL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL5_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 2.430e-82
Identity = 124/199 (62.31%), Postives = 153/199 (76.88%), Query Frame = 0
Query:    1 MGVQKLLGSILLIVVTATYILPASLRIVFGPKLPP--YLGTIIAASIGIPVVLFAGFEMWKNLQANRQARKVRQQQEAIDQQTYGCIQPQVLNSFVVFPVRVNKRGCVASSWVEIGEQGVVANLCAAVKVTGVADTEGPLRRLCEATFRQDLEVIVYCGGGKAGPTGLAVGVGREGFGPFLASVVGHSIKDAIRLGTKG 197
            MG  KLLG + L+  T  Y+LP S+ + FG  +PP  Y G  +A  IG+P++ F  FEMWK L  NR+ RK R++ E I+ Q++GCI+PQVL+SFVVFPVRV+KRGC  SSWVE+GEQ V  NLCAA K++G  DTEGPLRRLCEATF  +L+VIVYCGGG AGPTGLAVGVGR+ FGP+LAS V HSIK+A+RLG +G
Sbjct:    1 MGAPKLLGGVALVGSTVFYVLPMSMHVAFGADIPPSTYFG--MAVLIGLPILGFIAFEMWKTLGDNRRVRKERRKLETIEAQSFGCIRPQVLDSFVVFPVRVSKRGCAGSSWVELGEQAVAVNLCAAAKISGAVDTEGPLRRLCEATFGSELDVIVYCGGGTAGPTGLAVGVGRQNFGPYLASRVAHSIKEAMRLGIQG 197          
BLAST of mRNA_H-paniculata_contig1058.378.1 vs. uniprot
Match: A0A7S2V258_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V258_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.580e-25
Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 0
Query:   40 IIAASIGIPVVLFAGFEMWKNLQANRQARKVRQQQEAIDQQTYGCIQPQVLNSFVVFPVRVNKRGCVASSWVEIGEQGVVANLCAAVKVTGVADTEGPLRRLCEATFRQDLEVIVYCGGGKAGPTGLAVGVGREGFGPFLASVVGHSIKDAIRLGTK 196
            I A + G  VV      ++K+L+  R+ R+ +   E++++QTY CI  QVL+S VVFPV+V +R    S +  IGE+ V       V+++   D    L+ LC      D  V V+ G GK+GPTGLAVG+ REG+GP LA+ VG +I+ +I+  TK
Sbjct:   65 IFAGAFGAIVVAVFAHSLYKDLKKKREWREYKHLVESVNEQTYQCITVQVLDSVVVFPVQVRRRDAPVSRFYRIGEEFVQ------VELSQSGDPTPLLQALCRDVIGSDFGVKVWVGAGKSGPTGLAVGIVREGYGPSLANHVGMAIEQSIQKHTK 215          
BLAST of mRNA_H-paniculata_contig1058.378.1 vs. uniprot
Match: A0A7S4EDG4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDG4_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.110e-7
Identity = 54/156 (34.62%), Postives = 71/156 (45.51%), Query Frame = 0
Query:   43 ASIGIPVVLFAGFEMWKNLQANRQARKVRQQQEAIDQQTYGCIQPQVLNSFVVFPVRVNKRGCVASSWVEIGEQGVVANLCAAVK-VTGVADTEGPLRRLCEATFRQDL-----EVIVYCGGGKAGPTGLAVGVG-REGFGPF-LASVVGHSIKDA 190
            A + +   L   F   ++ + +R   +  Q Q AI  QT+ C+ PQ    FVVFPVRV +RG  AS  V +    +   L    +   G  DTE  LR L EA           EV+ + G    GPTGLA G+  R G   F L   VG  + DA
Sbjct:  118 AVVAVVCGLILLFSYARDRRRDRARTRGAQSQRAIKSQTFQCVAPQTPGEFVVFPVRVARRGVAASRVVSLDGDELRVELDTKQRDAAGRLDTEASLRSLLEAALLPRFPTGAAEVVTFYG---EGPTGLAGGLALRRGAPDFALGRKVGCYLMDA 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1058.378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTL5_ECTSI2.430e-8262.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V258_9STRA2.580e-2540.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4EDG4_9STRA1.110e-734.62Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1058contigH-paniculata_contig1058:2928..6632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1058.378.1mRNA_H-paniculata_contig1058.378.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1058 2620..6894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1058.378.1 ID=prot_H-paniculata_contig1058.378.1|Name=mRNA_H-paniculata_contig1058.378.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MGVQKLLGSILLIVVTATYILPASLRIVFGPKLPPYLGTIIAASIGIPVV
LFAGFEMWKNLQANRQARKVRQQQEAIDQQTYGCIQPQVLNSFVVFPVRV
NKRGCVASSWVEIGEQGVVANLCAAVKVTGVADTEGPLRRLCEATFRQDL
EVIVYCGGGKAGPTGLAVGVGREGFGPFLASVVGHSIKDAIRLGTKGF*
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