prot_H-paniculata_contig10576.376.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10576.376.1
Unique Nameprot_H-paniculata_contig10576.376.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length546
Homology
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BLAST of mRNA_H-paniculata_contig10576.376.1 vs. uniprot
Match: D7G5Q2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q2_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 7.020e-40
Identity = 104/172 (60.47%), Postives = 124/172 (72.09%), Query Frame = 0 
Query:    1 MAIHLMTFVSAQADAVEAVACDIAVARTRLLRSREQSAAARFLALRAAAEETPARQKIVVLSGEERPQKCRPLPPRKRVPLSEKLGDIYADEP-KPLSLGSPTT----SKLEGPGENGSVSEGTGTEMWGEHDSDVDTPKILSISDLPSPS-GGAGMGSPRA---DGSLPSP 163
            MAI+L+TFV+AQA+AVE V  D+ +A+TRL R+REQSAA R L LR AA ETPARQKIVVL+G ERP KCRPLPPR+R+ L EKLG IYADEP   LSL S +     S   G G+ GSV+E    +MWGEH+S   + ++  ISDLPSPS GG G GSPR+   DGS  SP
Sbjct:   76 MAINLLTFVNAQAEAVEKVTSDVVIAKTRLNRAREQSAATRLLELRRAAGETPARQKIVVLTGSERPTKCRPLPPRRRISLKEKLGGIYADEPPSSLSLASDSGTLPGSAAAGLGDAGSVAETA--DMWGEHNSSPSSSRVGGISDLPSPSVGGDGGGSPRSFKPDGSSASP 245
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BLAST of mRNA_H-paniculata_contig10576.376.1 vs. uniprot
Match: A0A6H5JRA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 8.990e-40
Identity = 102/171 (59.65%), Postives = 122/171 (71.35%), Query Frame = 0 
Query:    1 MAIHLMTFVSAQADAVEAVACDIAVARTRLLRSREQSAAARFLALRAAAEETPARQKIVVLSGEERPQKCRPLPPRKRVPLSEKLGDIYADEP-KPLSLGSPTT----SKLEGPGENGSVSEGTGTEMWGEHDSDVDTPKILSISDLPSPSGGAGMGSPRA---DGSLPSP 163
            MAI+L+TFV+AQA+AVE V  D+ +A+TRL R+RE SAA R L LR AA ETPARQKIVVL+G ERP KCRPLPPR+R+ L EKLG IYADEP   LSL S +     S   G G+ GSV+E    +MWGEH+S   + ++  ISDLPSPS G G GSPR+   DGS  SP
Sbjct:   76 MAINLLTFVNAQAEAVEKVTSDVVIAKTRLNRARELSAATRLLDLRRAAGETPARQKIVVLTGSERPTKCRPLPPRRRISLKEKLGGIYADEPPSSLSLASDSATLPGSAAAGLGDTGSVAETA--DMWGEHNSSPSSSRVGGISDLPSPSVGGGGGSPRSFKPDGSSASP 244
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10576.376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5Q2_ECTSI7.020e-4060.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRA6_9PHAE8.990e-4059.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..545
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10576contigH-paniculata_contig10576:1376..6938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10576.376.1mRNA_H-paniculata_contig10576.376.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10576 1308..8218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10576.376.1 ID=prot_H-paniculata_contig10576.376.1|Name=mRNA_H-paniculata_contig10576.376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=546bp
MAIHLMTFVSAQADAVEAVACDIAVARTRLLRSREQSAAARFLALRAAAE
ETPARQKIVVLSGEERPQKCRPLPPRKRVPLSEKLGDIYADEPKPLSLGS
PTTSKLEGPGENGSVSEGTGTEMWGEHDSDVDTPKILSISDLPSPSGGAG
MGSPRADGSLPSPSSKSFKSSGGGNSGKSREKKSRLEVAAAARAAALPIA
APALAPPPPARESIVTKKRLSIVSRTTTGGGGAPPPLVSRAKPGAPPPLL
SQTSRGGGAGGGGKAPPPPPPPTSGRPKNSSVGGAGAQPPPPPPPPARGH
SLSIGDGMAQPPAPPLPRPPLPPPPPTSSQSQAPAPTPPLPPPPPKQELS
TSRAAPTPPPPLPPPRGAPQLPSTAQVPLASQQRQPPPPPPVPQPSFSAQ
PPPPRLPQPAVSSQPPPPPPPPSAPSTSFQPPPPPPPPASQSRSSSPPPP
PPPPPVVPSTSSQPPPPPPPASQFRMSQPPPPPPPPTSSRLRSSPPPPPP
PPPPPPPSNPFMSSQPPPPPPPLPSASSARPPVPPPPPPPPPPPS*
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