prot_H-paniculata_contig1057.373.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1057.373.1
Unique Nameprot_H-paniculata_contig1057.373.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.170e-44
Identity = 127/319 (39.81%), Postives = 161/319 (50.47%), Query Frame = 0
Query:    1 MASELTRTAIHAMRVKELRSELEIRDLDCTGLRPVLQARLLED--------LANRSSRR-RPTTLSEQHANGTKDDTLDKNRPSQQQRESHTLGAAVELAERPLTLRFLPEDAETGDEGGSTARSSGIDGGSLASPARQNAGLPFASLQPLRPFPGELLKDRFVLQFDGGSKGNPGNSGAGAVIYRLD-GGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQ------------------VKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTS 291
            M + ++RTAI  MRV ELR EL  R LD TG+RPVLQ RL+E         + +RS +R R  T     A GT   T     P++ Q        A   A R  + R   +  + G    ST                                PG       +LQFDGGS+GNPG SG GAV+YRLD  GER+EV+    W+G + TNNEAEY  LIEGL AA++LGI+ + VEGDS LVI+QMLG Y+                  V SPKM P + EA  + +AFD+   + HI R  N RAD+LAN AM +  +S
Sbjct:   64 MGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRERSNTTEPPRAAGT---TAPPG-PARSQ-------VATSQAARTPSPRIRQQQQQRGISTSSTK-------------------------------PGRQRSTTHLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDA-LELGHIMRAHNERADDLANIAMDTETSS 339          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.490e-37
Identity = 70/143 (48.95%), Postives = 103/143 (72.03%), Query Frame = 0
Query:  154 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTSRYAVS 296
            +VLQFDGGS+GNPG +GAG V+Y   G    EV+ G +++G  +TNNEAEY  L+ GL+ A+ +G+ NI+V+GDS L+++Q+ G+Y+ KS K+ P +   ++L++ F+S F +RHIPRE N RADELAN+AM  R+     V+
Sbjct:   11 YVLQFDGGSRGNPGTAGAGMVLYDEVG---HEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNS-FEVRHIPREQNFRADELANEAMDWRENDYLGVN 149          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.170e-35
Identity = 75/134 (55.97%), Postives = 96/134 (71.64%), Query Frame = 0
Query:  154 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTS 287
            + LQFDGGS+GNPG SGAG VIY     + +EV+ G Y +  EATNNEAEY AL++GL+ A+ LGIR++ V+GDSNL++ Q+ G Y+VKS  + P   +A  L  AF S+F + HIPRE N RADELAN AM S
Sbjct:   37 YNLQFDGGSRGNPGLSGAGMVIYN---DKSQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAF-STFEISHIPREENGRADELANIAMDS 166          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0FCH9_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FCH9_9ZZZZ)

HSP 1 Score: 123 bits (309), Expect = 1.790e-31
Identity = 68/136 (50.00%), Postives = 90/136 (66.18%), Query Frame = 0
Query:  150 LKDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 285
            +   ++L FDG SKGNPG SGAGAVI+R D    KE++   ++VG   TNN AEY  LI GL  A +  +  ++V+GDSNLVIRQM GE+QVKSPK+ P + EA+ L +    +    H+ R+ N RADELAN A+
Sbjct:    1 MTSNYILFFDGCSKGNPGESGAGAVIFRDD----KEIYTESFFVGDRETNNVAEYTGLIMGLSYAVDNNMDTLVVKGDSNLVIRQMKGEFQVKSPKLMPYYQEARKLSDKI-KNIRYEHVYRDNNKRADELANNAL 131          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A7S2I3Y3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I3Y3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.780e-31
Identity = 68/137 (49.64%), Postives = 95/137 (69.34%), Query Frame = 0
Query:  154 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQT 290
            FVL+FDGGS+GNPG +G+G V+Y  D  E  EV+ G  ++G ++TNN AEY  L+ G++ A  LG R+I+ +GDS LV+ Q+ GE++VK+  + P + E   L   F+S F + HIPRE NSRAD LANKAM  R++
Sbjct:   72 FVLRFDGGSRGNPGVAGSGMVLY--DAEEGAEVWSGQKYLGEDSTNNVAEYTGLLTGMKCAYALGARHIVAQGDSLLVVNQLNGEWKVKNQGLKPIFQEVMKLRGQFES-FQINHIPREENSRADRLANKAMDDRKS 205          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A4D9D4W7_9STRA (RNase H type-1 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4W7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.520e-30
Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 0
Query:  127 PARQNAGLPFASLQPLRPFPGELLKDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVG--PEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 285
            PAR +       ++P+ P      +  ++L+FDGGS+GNPG  GAG VIY        +V     W+G  P  TNNEAEY  L+ GLRAAK+LGIR I VEGDS LV+RQ+LG Y+V++ ++   + EA AL E F + F++RH+ R  NS AD LAN+A+
Sbjct:  312 PARSHVSKVGTGMRPMSPIINPTAQ--YLLRFDGGSRGNPGPGGAGIVIYEQ--ASLVQVRGLSLWLGSDPPLTNNEAEYHGLVAGLRAAKKLGIRRICVEGDSQLVVRQILGVYKVRNERLRVLYSEAMALKENF-AEFSIRHVERSQNSDADALANRAL 467          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ)

HSP 1 Score: 119 bits (297), Expect = 1.980e-29
Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 0
Query:  154 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELAN 282
            + L+FDG SKGNPG +GAGAVIY+ D    +E++    +VG + TNN AEY  LI GL  A ELGI+ ++V GDS L+I+QM GEY+VKS  +   +L+A+ L   FD+     HI R+ N+RADELAN
Sbjct:   28 YCLKFDGCSKGNPGPAGAGAVIYKND----QEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDN-IKYEHIYRKDNTRADELAN 151          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ)

HSP 1 Score: 118 bits (295), Expect = 4.020e-29
Identity = 68/138 (49.28%), Postives = 92/138 (66.67%), Query Frame = 0
Query:  154 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTS 291
            + L+FDG SKGNPG +GAGAVIY+ D    +E++    +VG + TNN AEY  LI GL  A ELGI+ ++V GDS L+I+QM GEY+VKS  +   +L+A+ L   F S     HI R+ N+RADELAN  + S+ +S
Sbjct:   27 YCLKFDGCSKGNPGPAGAGAVIYKND----EEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTL-SRFLSEVHYEHIYRKDNTRADELANFGLQSKLSS 159          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0ESY5_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESY5_9ZZZZ)

HSP 1 Score: 114 bits (284), Expect = 1.690e-27
Identity = 70/136 (51.47%), Postives = 84/136 (61.76%), Query Frame = 0
Query:  150 LKDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 285
            +   F LQFDG SKGNPG SGAGAVIY  D    +E++    +VG   TNN AEY  LI GL+ A EL I+ I+VEGDS LVI+QM G+Y+V S  +     EA  L E FDS     HI R  N RAD L+N A+
Sbjct:   25 ISSGFRLQFDGCSKGNPGISGAGAVIYNFD----EEIWWDSLFVGENTTNNYAEYSGLILGLKKAIELDIKEIIVEGDSTLVIKQMKGDYKVYSENLQDLHREALKLCENFDS-IQFTHIYRINNKRADYLSNLAI 155          
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0HEB0_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HEB0_9ZZZZ)

HSP 1 Score: 113 bits (282), Expect = 4.510e-27
Identity = 65/132 (49.24%), Postives = 87/132 (65.91%), Query Frame = 0
Query:  154 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 285
            +VL+FDG SKGNPG +GAGAV+Y  D    +E++    +VG + TNN AEY  L+ GL  A    IR + V GDS LVI+QM GEY++KS  + P + EA+++ + FD      HI R+ NSRADELAN A+
Sbjct:   30 YVLKFDGCSKGNPGPAGAGAVLYYND----REIWYNRKFVGRKETNNYAEYCGLLLGLNEALRENIRELKVCGDSQLVIKQMKGEYKLKSENLYPLYTEAKSMEKQFDK-IVYEHIYRQYNSRADELANAAL 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF8_ECTSI3.170e-4439.81Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S2KCF7_9STRA3.490e-3748.95Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6T8JIG0_9STRA3.170e-3555.97Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6C0FCH9_9ZZZZ1.790e-3150.00RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A7S2I3Y3_9STRA3.780e-3149.64Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A4D9D4W7_9STRA6.520e-3046.58RNase H type-1 domain-containing protein n=3 Tax=M... [more]
A0A6C0DKZ1_9ZZZZ1.980e-2951.16RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0DSN1_9ZZZZ4.020e-2949.28RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0ESY5_9ZZZZ1.690e-2751.47RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0HEB0_9ZZZZ4.510e-2749.24RNase H type-1 domain-containing protein n=1 Tax=v... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 10..44
e-value: 1.6E-8
score: 44.3
IPR003034SAP domainPFAMPF02037SAPcoord: 11..43
e-value: 4.6E-8
score: 32.6
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 2..55
e-value: 2.6E-7
score: 32.0
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 9..44
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 158..284
e-value: 1.5E-25
score: 89.4
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 150..286
score: 14.778
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 152..293
e-value: 2.6E-37
score: 129.9
NoneNo IPR availablePANTHERPTHR46387:SF2POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 82..290
NoneNo IPR availablePANTHERPTHR46387FAMILY NOT NAMEDcoord: 82..290
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 152..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1057contigH-paniculata_contig1057:22997..27263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1057.373.1mRNA_H-paniculata_contig1057.373.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1057 22405..27310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1057.373.1 ID=prot_H-paniculata_contig1057.373.1|Name=mRNA_H-paniculata_contig1057.373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MASELTRTAIHAMRVKELRSELEIRDLDCTGLRPVLQARLLEDLANRSSR
RRPTTLSEQHANGTKDDTLDKNRPSQQQRESHTLGAAVELAERPLTLRFL
PEDAETGDEGGSTARSSGIDGGSLASPARQNAGLPFASLQPLRPFPGELL
KDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNN
EAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKW
LEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTSRYAVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf
IPR002156RNaseH_domain
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf