prot_H-paniculata_contig10565.369.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10565.369.1
Unique Nameprot_H-paniculata_contig10565.369.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length49
Homology
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BLAST of mRNA_H-paniculata_contig10565.369.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 8.800e-16
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0 
Query:    2 PDEIGTLVIRAEEMSAQEVWVRALAARLLSKDHHARMAELYGGGADD 48
            P E GTLVIRAE + AQ VWVRALAARL S++HHARMAELYGGGA D
Sbjct: 4803 PTETGTLVIRAESVEAQHVWVRALAARLTSREHHARMAELYGGGAGD 4849
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10565.369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYV2_ECTSI8.800e-1678.72PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10565contigH-paniculata_contig10565:8282..8428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10565.369.1mRNA_H-paniculata_contig10565.369.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10565 8236..8696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10565.369.1 ID=prot_H-paniculata_contig10565.369.1|Name=mRNA_H-paniculata_contig10565.369.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=49bp
MPDEIGTLVIRAEEMSAQEVWVRALAARLLSKDHHARMAELYGGGADD*
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