prot_H-paniculata_contig10565.368.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10565.368.1
Unique Nameprot_H-paniculata_contig10565.368.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length347
Homology
BLAST of mRNA_H-paniculata_contig10565.368.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 5.370e-59
Identity = 170/364 (46.70%), Postives = 195/364 (53.57%), Query Frame = 0
Query:    1 RAGQGQESPVEFDVLGFLSFAKADLRPFLRVLLRTKAFSTFLADARRWSP------VSMVPSASAGDDTHSTRAV-----RGSFKSGRRGDSEAGAGGSSLKQRGGRKEEAPDYSDISHRRQRSRERLKGSTVLGHGTATSSGARSGPSFDMKFPSGRGEIRRGSGTIHGSGTSIGGGGSNSKVEEEKGTAAAGLQRTSGSAGSAGEGFRHKLEHAITVRMQEQLQFHSMVGTERMGAYLLTYSTQSQPVAPP--IAGDFGLGGGLDGSLPGVPLSPTGANGGSGSGG-------LSRSSLAGFMASASRAPKVKKRWCVLDATRFTLFRTRSKTRVKSHVPLDPRAVALVTPHFTPSAARGGG 344
            RAG GQES VEFDVLGFLSFAKADLRPFLRVLLRT+AF+ FL DAR W+P       S + + + G  +  +R +     R      RRG  E  +      Q+G    +AP          RSRE    +      T  + G RS  S  M  P G     RGS + H SGTS+ G                            G+GFR  LE AIT RMQEQLQ  S VGTERMGA+LLTY T SQ VAP    A D G G G  GSL G  LSPTG                +SR+++A   A A+ APKV+KRWCVLDATR TLFRTR+KTRVK  V LDP  VALVTP FTP    GGG
Sbjct: 4456 RAGHGQESDVEFDVLGFLSFAKADLRPFLRVLLRTRAFAAFLGDARGWTPSTATLQASQIAATAEGASSRLSRTIWAGEQREESARARRGRDEPSS------QQGQSGRQAPS---------RSREHRAAAAAPTTATENTQGRRSSDSGGMSAPGGE---ERGSSSRHASGTSVAG----------------------------GDGFRLNLERAITTRMQEQLQVQSAVGTERMGAFLLTYYTHSQHVAPQSSAAVDMGYGFG-QGSLGGA-LSPTGGXXXXXXXXXXXXXXXISRAAMA-IRARANGAPKVRKRWCVLDATRLTLFRTRTKTRVKESVQLDPSRVALVTPPFTPWGRAGGG 4770          
BLAST of mRNA_H-paniculata_contig10565.368.1 vs. uniprot
Match: A0A6H5KKP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKP3_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 6.000e-15
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 RAGQGQESPVEFDVLGFLSFAKADLRPFLRVLLRTKAFSTFLADAR 46
            RAG GQES VEFDVLGFLSFA+ADLRPFLRVLLRTKAF+ FLADAR
Sbjct:  134 RAGHGQESDVEFDVLGFLSFAQADLRPFLRVLLRTKAFAAFLADAR 179          
BLAST of mRNA_H-paniculata_contig10565.368.1 vs. uniprot
Match: A0A836CI77_9STRA (DENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI77_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-7
Identity = 26/43 (60.47%), Postives = 37/43 (86.05%), Query Frame = 0
Query:  293 KVKKRWCVLDATRFTLFRTRSKTRVKSHVPLDPRAVALVTPHF 335
            KVK+RWC+LDAT+ + +R+RSKTRVK ++P +P +V+LVTP F
Sbjct: 4017 KVKRRWCILDATKLSYYRSRSKTRVKGYIPFEPASVSLVTPPF 4059          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10565.368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYV2_ECTSI5.370e-5946.70PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KKP3_9PHAE6.000e-1589.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CI77_9STRA1.350e-760.47DENN domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10565contigH-paniculata_contig10565:5189..8203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10565.368.1mRNA_H-paniculata_contig10565.368.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10565 5189..8205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10565.368.1 ID=prot_H-paniculata_contig10565.368.1|Name=mRNA_H-paniculata_contig10565.368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp
RAGQGQESPVEFDVLGFLSFAKADLRPFLRVLLRTKAFSTFLADARRWSP
VSMVPSASAGDDTHSTRAVRGSFKSGRRGDSEAGAGGSSLKQRGGRKEEA
PDYSDISHRRQRSRERLKGSTVLGHGTATSSGARSGPSFDMKFPSGRGEI
RRGSGTIHGSGTSIGGGGSNSKVEEEKGTAAAGLQRTSGSAGSAGEGFRH
KLEHAITVRMQEQLQFHSMVGTERMGAYLLTYSTQSQPVAPPIAGDFGLG
GGLDGSLPGVPLSPTGANGGSGSGGLSRSSLAGFMASASRAPKVKKRWCV
LDATRFTLFRTRSKTRVKSHVPLDPRAVALVTPHFTPSAARGGGGAG
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