prot_H-paniculata_contig10552.365.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10552.365.1
Unique Nameprot_H-paniculata_contig10552.365.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length227
Homology
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BLAST of mRNA_H-paniculata_contig10552.365.1 vs. uniprot
Match: A0A6H5K0I5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I5_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.110e-16
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 0 
Query:  117 GAGSPTTGLTVREERYKRELEGLRTRVRELEGMMECRLEERERAYRRKLRAAVAECRSLKVREHGAV 183
            GA     GLT  E+RYKRELE LR RV ELEGM+  RLEERERAYRRKLRAAVAECRSL+VR+HGA+
Sbjct: 2096 GADDADPGLTDTEKRYKRELEALRGRVWELEGMVAGRLEERERAYRRKLRAAVAECRSLRVRKHGAL 2162
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BLAST of mRNA_H-paniculata_contig10552.365.1 vs. uniprot
Match: D8LJM5_ECTSI (Kinesin family member 3A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJM5_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.720e-14
Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:  117 GAGSPTTGLTVREERYKRELEGLRTRVRELEGMMECRLEERERAYRRKLRAAVAECRSLKVREHG 181
            GA     GLT  E+RYKRELE LR RV ELEGM+  RLEERERAYRRKLRAAVAECRS +VR+HG
Sbjct: 2720 GADDADPGLTDTEKRYKRELEALRGRVWELEGMVGGRLEERERAYRRKLRAAVAECRSSRVRKHG 2784
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10552.365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I5_9PHAE5.110e-1674.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJM5_ECTSI2.720e-1473.85Kinesin family member 3A n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..149
NoneNo IPR availableCOILSCoilCoilcoord: 6..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10552contigH-paniculata_contig10552:3720..6903 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10552.365.1mRNA_H-paniculata_contig10552.365.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10552 3639..6931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10552.365.1 ID=prot_H-paniculata_contig10552.365.1|Name=mRNA_H-paniculata_contig10552.365.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp
MIAAEAAARDAALREAREESDRLEEEGGMSPEFSSERSGYSWSVPTTATG
SPAGSGAGGGGATTAARLMMHAPSWTVGQDSSPSSTGRQKESPRRSSQNS
GDAGRAGGVGLSVAGAGAGSPTTGLTVREERYKRELEGLRTRVRELEGMM
ECRLEERERAYRRKLRAAVAECRSLKVREHGAVRSTSSRSGSVDKISHHE
TGKLSTSDLTRSRRDSAPGARTQRVL*
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