prot_H-paniculata_contig10539.353.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10539.353.1
Unique Nameprot_H-paniculata_contig10539.353.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length403
Homology
BLAST of mRNA_H-paniculata_contig10539.353.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 6.070e-30
Identity = 136/377 (36.07%), Postives = 180/377 (47.75%), Query Frame = 0
Query:   25 HPLCGIENGVAE-LVVEVEKSKDTSRDLKAEFNKLAAAKKQLMNDILRLERDKEKLTEKHIGDLARIREKLEAEAREGKRQLKEELDKGHDASMNQLRQDLRTKIEPLETETRRLRREVMRAQQADSLTASKSNGKNAGGKRGRFGK---RGNGAAEPPAPAPAGDVVSMISMPTSMSFWRGLTDAFAPQDLLFNTGDDG---GVREGGAVGRDVEDDKVPPPALLVLAAVPMFYLLTRWRANRQRGKEGNAAVV--NDDGLVTDGETAS------RHGWKD------------ADTDVSGENIHILQKHPTSFRLHQRRSVSCSPTKRDNANNDRRPAVSLSLSP----PRSLEN--LISPSVSLARNASLSRRNS 368
            HPLC  E G  + LV E  ++K+    L+AE   L   K  L  DI RLERDK  LTE+H+  + R+R  L+ +AR+GKR+L+ EL+KGH  SM++LR  L+ + E L  ET+RLR ++ RA++A S              R + GK   R      PPA  PA        +P    FW  LT AF P+DLL     DG   GV +GG       +  VPPPALLVLAAVP+F  + R R  R    +   ++   N +G  TD E  S         W+              D  V                   RRS+S SP K    N     ++ L+LSP    P+  E   L+SPSV ++RNAS  RR S
Sbjct:   90 HPLCSGEPGKIDGLVSEAREAKEAEGALRAEAAILRERKAVLDADIRRLERDKADLTEEHLAQMERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLREDLQRAREAKSAAXXXXXXXXXXSPRTKGGKSSARSIARDTPPAAVPA--------LPAG--FWNSLTSAFTPRDLL-----DGVAVGVGDGG-------NGAVPPPALLVLAAVPLFCFIKRRRIQRLVADQEGTSISGSNYEGQTTDVEDQSDEEEEVESAWRGKEAVGDEEKKEKVDDGVRDXXXXXXXXXXXXXTEQLRRSLSSSPMKLRTGNTPGS-SLRLNLSPRPQGPQFSEPEVLVSPSVVMSRNASSGRRQS 443          
BLAST of mRNA_H-paniculata_contig10539.353.1 vs. uniprot
Match: D7G1T9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T9_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 6.880e-18
Identity = 110/316 (34.81%), Postives = 146/316 (46.20%), Query Frame = 0
Query:   87 LARIREKLEAEAREGKRQLKEELDKGHDASMNQLRQDLRTKIEPLETETRRLRREVMRAQQADSLTASKSNGKNAG--GKRGRFGKRGNGAAEPPAPAPAGDVVSMISMPTSMSFWRGLTDAFAPQDLLFNTGDDG---GVREGGAVGRDVEDDKVPPPALLVLAAVPMFYLLTRWRANRQ-RGKEGNAAVVNDD-GLVTDGETAS-----------RHGWKDADTDVSGENIHILQKHPTSFRLHQ----------RRSVSCSPTKRDNANNDRRPAVSLSLSP----PRSLEN--LISPSVSLARNASLSRRNS 368
            + R+R  L+ +AR+GKR+L+ EL+KGH  SM++LR  L+ + E L  ET+RLR ++ RA++A S               K G+   R      P A  PA        +P    FW  LT AF P+DLL     DG   GV +GG       +  VPPPALLVLAAVP+F  L RWR  R    +EG +   +DD G  TD E  S              W+  +     E                          RRS+S SP K     N    ++ L+LSP    P+  E   L+SPSV ++RNAS  RR S
Sbjct:    1 MERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLREDLQRAREAKSAXXXXXXXXXXXPRAKGGKSSARSIARDTPAAAVPA--------LPAG--FWNSLTSAFTPRDLL-----DGVAVGVGDGG-------NGAVPPPALLVLAAVPLFCFLKRWRIQRLVADQEGTSISGSDDEGQTTDVEAQSDKXXXXXXXXVEGAWRGKEAVGDEEXXXXXXXXXXXXXXXXXXXXXXTDQLRRSLSSSPMKL-RTGNPPGSSLRLNLSPRPQGPQITEPEVLVSPSVVMSRNASSGRRQS 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10539.353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNU8_9PHAE6.070e-3036.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T9_ECTSI6.880e-1834.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..82
NoneNo IPR availableCOILSCoilCoilcoord: 121..148
NoneNo IPR availableCOILSCoilCoilcoord: 84..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..403
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10539contigH-paniculata_contig10539:3416..5642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10539.353.1mRNA_H-paniculata_contig10539.353.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10539 3416..5644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10539.353.1 ID=prot_H-paniculata_contig10539.353.1|Name=mRNA_H-paniculata_contig10539.353.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=403bp
EETEGVKDGGSGSESRADGGIDVQHPLCGIENGVAELVVEVEKSKDTSRD
LKAEFNKLAAAKKQLMNDILRLERDKEKLTEKHIGDLARIREKLEAEARE
GKRQLKEELDKGHDASMNQLRQDLRTKIEPLETETRRLRREVMRAQQADS
LTASKSNGKNAGGKRGRFGKRGNGAAEPPAPAPAGDVVSMISMPTSMSFW
RGLTDAFAPQDLLFNTGDDGGVREGGAVGRDVEDDKVPPPALLVLAAVPM
FYLLTRWRANRQRGKEGNAAVVNDDGLVTDGETASRHGWKDADTDVSGEN
IHILQKHPTSFRLHQRRSVSCSPTKRDNANNDRRPAVSLSLSPPRSLENL
ISPSVSLARNASLSRRNSAAAGKPTSTFAPSASKLPPNTESLISPHESKC
FAA
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