prot_H-paniculata_contig10528.344.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10528.344.1
Unique Nameprot_H-paniculata_contig10528.344.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 5.290e-35
Identity = 63/68 (92.65%), Postives = 67/68 (98.53%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLY+LGADALTPAYPRLTDDG NT+RRTHLE+F+
Sbjct: 1309 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNTYRRTHLELFV 1376          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: D7FI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI13_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.050e-34
Identity = 62/68 (91.18%), Postives = 66/68 (97.06%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLY+LGADALTPAYPRLTDDG N +RRTHLE+F+
Sbjct:  492 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 559          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A7S2XY64_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY64_9STRA)

HSP 1 Score: 120 bits (300), Expect = 2.970e-31
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    3 VALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            VALG T+ILQYV+QGL+HPARRVR+VYWK+YN+LYM GADALTPAYPRL DDG NT+RRTHLE+F+
Sbjct:  279 VALGPTKILQYVMQGLYHPARRVRDVYWKIYNTLYMFGADALTPAYPRLEDDGLNTYRRTHLELFI 344          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A6V1S7R5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S7R5_HETAK)

HSP 1 Score: 121 bits (303), Expect = 2.050e-30
Identity = 53/67 (79.10%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    2 SVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            +VALG TR+LQYVLQG++HPARRVR+VYWK+YNSLY+ GADALTPAYPRL D+GANT+RRTHLE+F+
Sbjct:  829 AVALGPTRVLQYVLQGMYHPARRVRDVYWKIYNSLYIYGADALTPAYPRLEDEGANTYRRTHLELFV 895          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A7S3GVU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.900e-28
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            M VALG  ++ QYV+QGLFHPAR+VREVYWK+YNS+Y+ G DALTPAYPRL DDG N +RRTHLE+F+
Sbjct:  389 MIVALGPAKLFQYVMQGLFHPARKVREVYWKIYNSMYIYGQDALTPAYPRLEDDGVNNYRRTHLELFI 456          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A1Z9QC94_9BACT (TOG domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QC94_9BACT)

HSP 1 Score: 114 bits (286), Expect = 4.070e-28
Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            M VALG  +ILQYVLQGL+HPARRVR+VYWKLYN++Y+ GADALT AYPRL DDG NT+RRTHLE+F+
Sbjct: 1206 MIVALGPIKILQYVLQGLYHPARRVRDVYWKLYNTIYIYGADALTCAYPRLEDDGVNTYRRTHLELFV 1273          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A7S3GVL6_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVL6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.030e-27
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            M VALG  ++ QYV+QGLFHPAR+VREVYWK+YNS+Y+ G DALTPAYPRL DDG N +RRTHLE+F+
Sbjct: 1139 MIVALGPAKLFQYVMQGLFHPARKVREVYWKIYNSMYIYGQDALTPAYPRLEDDGVNNYRRTHLELFI 1206          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A2P4YHC9_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHC9_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.650e-26
Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    3 VALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEV 66
            VALG   ILQYVLQGLFHPARRVREVYWK+YNSLYM   D LTPAYP L DDG N++ RT+LE+
Sbjct:  107 VALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPALDDDGVNSYNRTYLEL 170          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A812NDD3_SYMMI (Sf3b1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NDD3_SYMMI)

HSP 1 Score: 108 bits (269), Expect = 8.050e-26
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    3 VALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            V+LG   +L YVLQGLFHPAR+VR+V+WK+YNSLY+ GAD LTP YPRL DDG NT+RRTHLE+F+
Sbjct: 1001 VSLGAGTVLLYVLQGLFHPARKVRDVFWKIYNSLYIFGADGLTPFYPRLEDDGVNTYRRTHLELFI 1066          
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Match: A0A4D9CY01_9STRA (TOG domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY01_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.500e-25
Identity = 45/68 (66.18%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPRLTDDGANTFRRTHLEVFM 68
            + VALG T++  YV+QGL+HPAR+VREVYWK+YN+LY+ G DALTPAYPR+ D+G +TFRRT LE+F+
Sbjct: 1250 LVVALGPTKVFHYVIQGLYHPARKVREVYWKIYNTLYIFGTDALTPAYPRIEDEGIHTFRRTTLEIFI 1317          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10528.344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ74_9PHAE5.290e-3592.65TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FI13_ECTSI1.050e-3491.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XY64_9STRA2.970e-3180.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1S7R5_HETAK2.050e-3079.10Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3GVU2_9STRA3.900e-2872.06Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A1Z9QC94_9BACT4.070e-2876.47TOG domain-containing protein n=1 Tax=Phycisphaera... [more]
A0A7S3GVL6_9STRA1.030e-2772.06Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A2P4YHC9_9STRA3.650e-2675.00Splicing factor 3B subunit 1 n=1 Tax=Phytophthora ... [more]
A0A812NDD3_SYMMI8.050e-2671.21Sf3b1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A4D9CY01_9STRA1.500e-2566.18TOG domain-containing protein n=2 Tax=Monodopsidac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038737Splicing factor 3B subunit 1-likePANTHERPTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10528contigH-paniculata_contig10528:4167..4373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10528.344.1mRNA_H-paniculata_contig10528.344.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10528 4161..4373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10528.344.1 ID=prot_H-paniculata_contig10528.344.1|Name=mRNA_H-paniculata_contig10528.344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
MSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYMLGADALTPAYPR
LTDDGANTFRRTHLEVFM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038737SF3b_su1-like