prot_H-paniculata_contig10027.34.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10027.34.1
Unique Nameprot_H-paniculata_contig10027.34.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.810e-53
Identity = 97/185 (52.43%), Postives = 120/185 (64.86%), Query Frame = 0
Query:    1 MRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFL-NHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE 184
            +RR  TAGEL+QFLQA NW+R S+P ++ +V PLRE LE  +  + +RT+  A N  I    WT     +WE A + V+ AV LYHP A ++ L+FPDASD    S VTQVP  E+        MSHEPL FLSG F+G+Q RW  VDKE +AI+STF RL Y+ W G HI   HRNLAYIF PE
Sbjct:  880 LRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPE 1064          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.430e-49
Identity = 99/186 (53.23%), Postives = 116/186 (62.37%), Query Frame = 0
Query:    1 MRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFL-NHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQR-RWPVVDKEAYAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE 184
            MRR  TAGEL+QFLQA NW+R S+P +A VV PLR  LE  L     RT+  A+N  I     T      W  A + V+ AV L HP    + L+FPDASD    S +TQVP ++L  G     M+HEP+ FLSG FKGAQ+ RW  VDKE YAIVSTF RL Y+ WD  HIF  HRNLAYIF PE
Sbjct:  978 MRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPE 1163          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 5.450e-47
Identity = 86/172 (50.00%), Postives = 108/172 (62.79%), Query Frame = 0
Query:   14 LQASNWMRMSVPELAVVVEPLREMLETFL-NHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE 184
            + A NW+R S+P ++ +V PLRE LE  +  + +RT+  A N  I    WT     +WE A + V+ AV LYHP A ++ L+FPDASD    S VTQVP  E+        MSHEPL FLSG F+G+Q RW  VDKE +AI+STF RL Y+ W G HI   HRNLAYIF PE
Sbjct:  117 ISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPE 288          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WTW1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTW1_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.510e-35
Identity = 72/182 (39.56%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    6 TAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRHAA-DNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 184
            TA +L QF+ A+NWMR S+P+   +++PLR +L+  +     ++  +   + ++   W+++ AA +E     ++  V L HPR++    +F DASD F  +  TQ+P E+LS   +D +  HEPLAFLSG F GA +RWP+V+KEAYA+V +  RL Y+     G  +F  HRNL Y+F+P 
Sbjct:  787 TAADLQQFVCATNWMRASIPDYNKLIDPLRRLLDVAVKAAGSSKKKSLARVALSLVGWSQDHAACFEDVKSALANVVQLSHPRSDMEVCVFTDASDKFWGAVATQIPSEDLSLPLEDQR--HEPLAFLSGTFTGASQRWPIVEKEAYAVVESCKRLDYLVVRPGGFRLFTDHRNLVYMFNPR 966          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0W9L2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9L2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.620e-35
Identity = 73/182 (40.11%), Postives = 111/182 (60.99%), Query Frame = 0
Query:    6 TAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRHAA-DNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 184
            TA +L QF+ A+NWMR S+P+   +++ LR +L+  +     ++  A   + ++   W ++ AA +E     ++  VPL HPR++    +F DASD F  +  TQ+P E+LS   +D +  HEPLAFLSG F GA +RWP+V+KEAYA+V +  RL Y+     G  +F  HRNL Y+F+P 
Sbjct:  830 TAADLQQFVCATNWMRASIPDYNTLIDSLRRLLDVAVKAAGSSKKKALARVALSLVGWWQDHAACFEDVKSALANVVPLSHPRSDMELCVFTDASDKFWGAVATQIPSEDLSLPLEDQR--HEPLAFLSGTFTGASQRWPIVEKEAYAVVESCKRLDYIVVRPGGFRLFTDHRNLVYMFNPR 1009          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0XQJ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQJ2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.550e-34
Identity = 73/182 (40.11%), Postives = 113/182 (62.09%), Query Frame = 0
Query:    6 TAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRHAA-DNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 184
            TA +L QF+ A+NWMR S+ +   +++PLR +L+  +     ++  A   + ++   W+++ AA +E A   ++  VPL HPR++    +F DASD F  +  TQ+P E+LS   +D +  H+PLAFLSG F GA + WP+V+KEAYA+V +  RL Y+     G  +F  HRNLAY+F+P 
Sbjct:  656 TAADLQQFVCATNWMRASITDNNKLIDPLRRLLDVAVKAAGSSKKKALARVALSLVGWSQDHAACFEDAKSALANVVPLSHPRSDLEVCVFTDASDKFWGAVATQIPSEDLSLPLEDQR--HKPLAFLSGTFTGASQCWPIVEKEAYAVVESCKRLDYLVVRPGGFRLFTDHRNLAYMFNPR 835          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WP68_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP68_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.830e-34
Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 0
Query:    1 MRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLET---FLNHTDRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHPE 184
            M+   TA EL QFL A+NWMR S+P  A  V+PLR +L+          +T  A  ++ + R  WT E    +E     ++  VPL HP  +++  +F DAS     ++ TQVP E+L    D  K  HEPLAFLSG+F GA  RWPV++KEAYA+V +  RL Y+     G  +F  HRNL YIF+P 
Sbjct:  824 MKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKADLAVAR--WTAEHDECFEEVKATLARMVPLAHPSEDKAICLFTDASADHWGAACTQVPKEDLELTVD--KERHEPLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPR 1008          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WPP4_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPP4_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.000e-33
Identity = 73/181 (40.33%), Postives = 108/181 (59.67%), Query Frame = 0
Query:    6 TAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHT-DRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHP 183
            TA EL QFL A+NWMR ++PE + +V PL ++L+        R + A   ++++   W E+ A  +E+    +   VPL HP   +   ++ DASD F  +  TQVP ++L     + +  HEPLAFLSGAF+GA  RWP+V+KEA+A+V +  RL Y+     G  +F  HRNL Y+F+P
Sbjct:  934 TAAELQQFLCATNWMRANIPEYSALVAPLTKLLDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPEKMVCLYTDASDGFWGAIATQVPLDDLELVASEQR--HEPLAFLSGAFRGASERWPIVEKEAFAVVESCKRLEYLLIRPGGFRLFTDHRNLVYMFNP 1112          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6A4ZJ35_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ35_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.480e-33
Identity = 70/181 (38.67%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    6 TAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTD-RTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHP 183
            TA +L QFL A+NWMR ++P+   +V PL  +++      D R + A   + ++   W E+    +E     +   VPL HP  ++   ++ DAS+ F  +  TQVP E+L+   +D +  HEPLAFLSGAF+G+  RWP+V+KEA+A+V +  RL Y+     G  +F  HRNL Y+F+P
Sbjct:  578 TAADLQQFLCATNWMRANIPQYTELVAPLTRLMDIAAKAADSRKKTALTRVALSSVGWAEDHLTCFERVKATLQRMVPLSHPDPDKMVCLYTDASEGFWGAVATQVPSEDLALPANDQR--HEPLAFLSGAFRGSSERWPIVEKEAFAVVESCKRLEYLLIRPGGFRLFTDHRNLVYMFNP 756          
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Match: A0A6G0WP84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP84_9STRA)

HSP 1 Score: 134 bits (336), Expect = 5.980e-33
Identity = 72/181 (39.78%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    6 TAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHT-DRTRHAADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASDSFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEAYAIVSTFLRLPYMFW--DGAHIFCGHRNLAYIFHP 183
            TA EL QFL A+NWMR+ +PE + +V PL ++ +        R + A   ++++   W E+ A  +E+    +   VPL HP  ++   ++ DASD F  +  TQVP ++L     + +  HEPLAFLSGAF+GA  RWP+V+KEA+A+V    RL Y+     G  +F  HRNL Y+F+P
Sbjct:  238 TAAELQQFLCATNWMRVKIPEYSALVAPLTKLSDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPDKMVCLYTDASDGFWGAIATQVPLDDLELVASEQR--HEPLAFLSGAFRGASERWPIVEKEAFAVVELCKRLEYLLIRPGGFRLFTDHRNLVYMFNP 416          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10027.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE1.810e-5352.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.430e-4953.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE5.450e-4750.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0WTW1_9STRA4.510e-3539.56Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0W9L2_9STRA4.620e-3540.11Uncharacterized protein n=3 Tax=Aphanomyces euteic... [more]
A0A6G0XQJ2_9STRA1.550e-3440.11Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WP68_9STRA9.830e-3442.33Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WPP4_9STRA1.000e-3340.33Reverse transcriptase domain-containing protein n=... [more]
A0A6A4ZJ35_9STRA2.480e-3338.67Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A6G0WP84_9STRA5.980e-3339.78Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.370coord: 84..182
e-value: 2.5E-13
score: 52.2
NoneNo IPR availableGENE3D3.30.70.270coord: 3..83
e-value: 2.5E-13
score: 52.2
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 5..182
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 94..182
e-value: 1.0E-10
score: 41.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10027contigH-paniculata_contig10027:21..572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10027.34.1mRNA_H-paniculata_contig10027.34.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10027 21..989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10027.34.1 ID=prot_H-paniculata_contig10027.34.1|Name=mRNA_H-paniculata_contig10027.34.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
MRRTNTAGELIQFLQASNWMRMSVPELAVVVEPLREMLETFLNHTDRTRH
AADNITITRGDWTEERAATWETATERVSEAVPLYHPRANRSELIFPDASD
SFGRSSVTQVPPEELSEGGDDAKMSHEPLAFLSGAFKGAQRRWPVVDKEA
YAIVSTFLRLPYMFWDGAHIFCGHRNLAYIFHPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH