prot_H-paniculata_contig1002.30.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1002.30.1
Unique Nameprot_H-paniculata_contig1002.30.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1251
Homology
BLAST of mRNA_H-paniculata_contig1002.30.1 vs. uniprot
Match: D8LL38_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL38_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 4.180e-100
Identity = 386/948 (40.72%), Postives = 486/948 (51.27%), Query Frame = 0
Query:  110 AAVCQSAPYVWALLREAQVEMDHGTDVMGDELNKLWRNVREVAGAVIRSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRSTRPRPTLPPEEADALLTGLAQLQSEMKADIKSFRHRKAELGRKLEEF-----------------ESGPDGDSNRQRTWGRNGDAEVAALQKEAVSMRAGVAASHARLLRRVRELQGLPRRLAAPRGGSSTANINAASTSTGTTA-AADRTGSTVK-TMSLGSVHNLNDLTDSAKAVVAARNELLEXXXXXXXXXXXXARETSRRRAAGEQASRLESXXXXXXXXXXXAKRDTEKXXXXAETAAHALMTAREGLAAAE-------AARRSAE-------TAVESEK-HRLNSLQCEGDELEAGLRRAAQEVKQREARAGIATAVAEEEEARLADYKDSFGLEIEGLQKGVGELESEARGWRKALEQARSRLRVEEEEGQAAKAKVGEEKTKQLGEVERLKAEARALENRVGGLRRQRESDGNALARDTEAAAAELSALKSKVAEAHSTLQAQNAELEALANVLGNTASAVRTKEEKLDSLERRCTELETRIGNLKAEKERIVRNRDGARRGQEEELLRWREAVAERREEYERVTELARAKAASLGNLESQADAYIASTRQAHGEHEVAAARAQAALRAAREAAALAERGREKAXXXXXXXXXXXXXTAEAVEQFRRQAAEVVSEKELLGKVLTDLEXXXXXXXXXXXXXXXXXXXXXXXXXXXREEESALVGARQRATALAREEASLRAVAATARREGXXXXXXXXXXXXXLTELLEAVDRERRVLEGFRDQAAVLEANLARKKEEDRFAREAADAQQLRLDEIKREVTLLRDEHLRVEKNVWALKSELAALDTRRDDAARRDRRRDREEVALAVRRDTLADAAAQEEQRLRLAATAKEGLEAEVAELDSRA 1023
            AA+ + +P +W LLREAQ EM+ GTDV+GDELN LWRNVRE  GA    G+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           LP  +ADALL GL +LQ+EM+    SF+ ++  L RK+++                    G  G   R+R   +  D  +  L++EA SMRA V ASHARLL RVRE      + +A  GG+        S + G      D +G       S GS   L+DL DSA+AV+AAR EL E            + E  + RAA  QASRLES           A RD +K    AE  A     AR+  A A        ++RR AE        A ESE   RL SL+ E +ELE     A++ +++REAR             RLAD +DSFGLEIEGLQKGVGELE+EA GWR ALE ARSRL  EEE G+  +                                                                                                         E  +  L+  ++R+    + ARR Q EEL RW+EA+AER++E+ER + + R+KA+SLG+LE +A+   A +RQA  + E       AAL AAR AA+LAERGR+KA XXXXX       T  A E+ RR  AE+ SE+  L K  TDL+                           REEE A+  A QRA ALARE+A L + A   + +      XXXXX   L EL EA DRERR LEGFRD+++ LEA +AR++E++RFAR AA+AQQ RLD++KREV  LRDEHLR EK+VW+LKSE+++L  RRD+A+RRDR                         RLR+A  A+E LEAE+ ELD+RA
Sbjct:    9 AAMERGSPRLWTLLREAQEEMERGTDVLGDELNILWRNVRE--GAADGRGDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ----------LPRRQADALLQGLEKLQAEMEVQAASFQRQRNGLMRKIQQSLAVGERRQHKHNSEGAAREGKGGTRERRR---KKCDKILERLEEEAESMRAAVIASHARLLGRVRETASNAAKASATAGGAVAGIGRERSATMGVVVRGGDHSGGCGGGNRSRGS---LDDLVDSAQAVLAAREELAELRVAVEETRDELSAEREKSRAARRQASRLESFRSSAAVAATRANRDADKARAEAERLALEAAAARDRAATAAEQEARQLSSRRCAEEEAEGAAAAAESELLGRLGSLRGEAEELEXXXXEASRXLERREARXXXXXXXXXXXXERLADCRDSFGLEIEGLQKGVGELEAEAVGWRGALEAARSRLEAEEERGRTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXEAEVEGLEFARDRVAEETEAARRRQAEELSRWKEAMAERQQEFERFSRMVRSKASSLGDLEKEAEGRAARSRQAQRDQEAXXXXXXAALDAARNAASLAERGRDKAEXXXXXAEAAESRTVHAEEELRRVTAEIGSERACLDKARTDLQAVQATAAELEAENSRARQQLADATERRREEEGAVEAAXQRAAALAREKAELSSTAVAVQLQSASEREXXXXXRNELAELREAADRERRTLEGFRDESSELEAGVARRREQERFARGAAEAQQARLDDLKREVAALRDEHLRAEKSVWSLKSEVSSLSARRDNASRRDRXXXXXXXXXXXXXXXXXXXXXXXXXRLRVATVARERLEAEMDELDARA 892          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1002.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL38_ECTSI4.180e-10040.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 827..847
NoneNo IPR availableCOILSCoilCoilcoord: 606..626
NoneNo IPR availableCOILSCoilCoilcoord: 995..1071
NoneNo IPR availableCOILSCoilCoilcoord: 560..587
NoneNo IPR availableCOILSCoilCoilcoord: 747..784
NoneNo IPR availableCOILSCoilCoilcoord: 873..917
NoneNo IPR availableCOILSCoilCoilcoord: 634..675
NoneNo IPR availableCOILSCoilCoilcoord: 925..952
NoneNo IPR availableCOILSCoilCoilcoord: 521..555
NoneNo IPR availableCOILSCoilCoilcoord: 440..481
NoneNo IPR availableCOILSCoilCoilcoord: 363..390
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 448..1092
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 448..1092

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1002contigH-paniculata_contig1002:9157..16419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1002.30.1mRNA_H-paniculata_contig1002.30.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1002 9156..16419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1002.30.1 ID=prot_H-paniculata_contig1002.30.1|Name=mRNA_H-paniculata_contig1002.30.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1251bp
SICRPNDTRRYTRFVESIKIYIERYPARTHPGNLQRKVAVTRAGPARENA
SMAFDVATTNRRRPRRKATPADHSEARDDCNHSGKVKRRYSEDKTSSSAR
PPPPPPPRLAAVCQSAPYVWALLREAQVEMDHGTDVMGDELNKLWRNVRE
VAGAVIRSGEEEEEEKKEEGRRRRDDVGGPNAILKVRRKENSAVGQRRRR
EEGGRSTRPRPTLPPEEADALLTGLAQLQSEMKADIKSFRHRKAELGRKL
EEFESGPDGDSNRQRTWGRNGDAEVAALQKEAVSMRAGVAASHARLLRRV
RELQGLPRRLAAPRGGSSTANINAASTSTGTTAAADRTGSTVKTMSLGSV
HNLNDLTDSAKAVVAARNELLELREAVKVKRNELARETSRRRAAGEQASR
LESSRSAAAAAAARAKRDTEKARAEAETAAHALMTAREGLAAAEAARRSA
ETAVESEKHRLNSLQCEGDELEAGLRRAAQEVKQREARAGIATAVAEEEE
ARLADYKDSFGLEIEGLQKGVGELESEARGWRKALEQARSRLRVEEEEGQ
AAKAKVGEEKTKQLGEVERLKAEARALENRVGGLRRQRESDGNALARDTE
AAAAELSALKSKVAEAHSTLQAQNAELEALANVLGNTASAVRTKEEKLDS
LERRCTELETRIGNLKAEKERIVRNRDGARRGQEEELLRWREAVAERREE
YERVTELARAKAASLGNLESQADAYIASTRQAHGEHEVAAARAQAALRAA
REAAALAERGREKAEREEARAAAAESRTAEAVEQFRRQAAEVVSEKELLG
KVLTDLEEARRAAGEVQTETTWTRQELTALSEKRREEESALVGARQRATA
LAREEASLRAVAATARREGAEGRDAAAAARNELTELLEAVDRERRVLEGF
RDQAAVLEANLARKKEEDRFAREAADAQQLRLDEIKREVTLLRDEHLRVE
KNVWALKSELAALDTRRDDAARRDRRRDREEVALAVRRDTLADAAAQEEQ
RLRLAATAKEGLEAEVAELDSRAGTLTAEANAATQEASALREDAATAAGR
ADEARKQVVALESQAVRLNVDMNAIRATKGALMAELNGLRHELDTLRGDR
GYYGSAAKRGVSGQVFSVGGGVSVRLKKTGGVRMPGPDVDPDEISRANDP
ALNRGTSILGVGPCDDDHHVKDGWNSSGGSCREKADLQRSSGDGRLLPGN
DGGGGGSPGNLVEVVAEFQGRLRRQVQAALANAEGAGVAFSRNSGGGREP
I
back to top