prot_H-paniculata_contig10012.22.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10012.22.1
Unique Nameprot_H-paniculata_contig10012.22.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A6H5L0C8_9PHAE (Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C8_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 8.830e-77
Identity = 122/155 (78.71%), Postives = 137/155 (88.39%), Query Frame = 0
Query:    1 VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEVK 155
            V +GK SNYDTD+FVPIFEAI + TGAR YTGKVG+ED DN+DMAYRVVADHIRTL+IAITDG  PSNDGRGYVLRR+LRRA+RYG QVLGGKPGFFHTLVPVVV  +K IFPELVDAE RV  V++DEEM+FN+TLDKGLKEFNK+A  LG+ K
Sbjct:  165 VIEGKMSNYDTDVFVPIFEAISSATGARPYTGKVGEEDSDNMDMAYRVVADHIRTLTIAITDGCTPSNDGRGYVLRRVLRRAIRYGQQVLGGKPGFFHTLVPVVVGLMKGIFPELVDAEARVTAVIKDEEMSFNKTLDKGLKEFNKVAAALGDSK 319          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 5.800e-76
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEVK 155
            QGK SNYDTD+FVPIFEAI++ TGAR YTGKVG+ED DN+DMAYRVVADHIRTL+IAITDG  PSNDGRGYVLRR+LRRA+RYG QVLGGKPGFFHTLVPVVV  +K IFPELVDAE RV  V++DEEM+FN+TLDKGLKEFNK+A  LG+ K
Sbjct:  278 QGKMSNYDTDVFVPIFEAIRSATGARPYTGKVGEEDSDNMDMAYRVVADHIRTLTIAITDGCTPSNDGRGYVLRRVLRRAIRYGQQVLGGKPGFFHTLVPVVVGLMKGIFPELVDAEARVTAVIKDEEMSFNKTLDKGLKEFNKVAAALGDSK 430          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A7S2Y168_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y168_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.390e-66
Identity = 106/146 (72.60%), Postives = 122/146 (83.56%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIA 148
            QGK SNYDTDIF PIF+AI+ VTGAR+YTGKVG ED DN DMAYRVVADH+RTL+ AITDG  PSNDGRGYVLRR+LRR VRYG Q+LG KPGFF+TLVPVVV  +K+ FPEL   +  V+ V+ +EE +FNRTLDKGLKEF+K A
Sbjct:  299 QGKDSNYDTDIFQPIFKAIQEVTGARTYTGKVGAEDTDNKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRVLRRGVRYGQQILGAKPGFFNTLVPVVVQQMKDFFPELEPKQDFVISVISEEEASFNRTLDKGLKEFSKKA 444          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A6V2XN65_HETAK (Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XN65_HETAK)

HSP 1 Score: 221 bits (563), Expect = 2.670e-64
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIA 148
            QGKTSNYDTDIF PIF AI+ VTGAR YTGK+  ED DNVDMAYRVVADHIRTL+ AITDG  PS+DGRGYVLRR+LRR VRYG QVLGG PGFFH LVPVVV  +K  FPEL   +  VMDV+++EE +FN+TLDKGL+EFNKIA
Sbjct:  265 QGKTSNYDTDIFQPIFRAIQQVTGARDYTGKIEAEDTDNVDMAYRVVADHIRTLTFAITDGAVPSSDGRGYVLRRVLRRGVRYGQQVLGGPPGFFHQLVPVVVGLMKGAFPELEGRQAFVMDVIKEEEESFNKTLDKGLREFNKIA 410          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A835Z4U5_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U5_9STRA)

HSP 1 Score: 220 bits (561), Expect = 5.290e-64
Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIA 148
            QGK SNYDTD+F+PIF  I++VTGAR Y+GKVG+ED D VDMAYRVVADHIRTL+ AITDG  PSNDGRGYVLRRILRR VRYG Q+LG KPGFFH LVPVVV  LK  FPEL +    VMD+L+DEE  FNRTLDKGL+EF+K A
Sbjct:  264 QGKDSNYDTDVFMPIFGVIQSVTGARPYSGKVGEEDTDTVDMAYRVVADHIRTLTFAITDGAVPSNDGRGYVLRRILRRGVRYGQQILGAKPGFFHQLVPVVVNMLKGAFPELKNRVSFVMDILKDEETAFNRTLDKGLREFSKAA 409          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A7S4GJP2_9EUGL (Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJP2_9EUGL)

HSP 1 Score: 209 bits (532), Expect = 6.870e-60
Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGL 151
            Q K SNYDTDIF PIFEAI+  TGAR Y GK+G+ED DN+DMAYRVVADHIRTL+ AI DG  PSN+GRGYVLRR+LRRAVRYG QVLGGKPGFFH LVP +V ++K+ FP++V+    VM +++DEE  FN+TL KG+  F K+   L
Sbjct:  329 QNKDSNYDTDIFTPIFEAIQEATGARPYAGKLGEEDPDNIDMAYRVVADHIRTLTFAIADGASPSNEGRGYVLRRVLRRAVRYGQQVLGGKPGFFHQLVPTIVETMKDGFPDIVNRADFVMSIIKDEEFAFNKTLGKGVAHFEKVVNEL 477          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: A0A7S1IJB5_9EUGL (Alanine--tRNA ligase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IJB5_9EUGL)

HSP 1 Score: 202 bits (514), Expect = 2.490e-58
Identity = 97/149 (65.10%), Postives = 116/149 (77.85%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGL 151
            QGK SNYDTD+F P+F AI+  TGAR+YTGK+G +D DN+DM YRVVADHIRTL+ AI DG  PSN+GRGYVLRR+LRRAVRYG QVLGG+PGFFH LVP VV  +K  FP+L   ++ VM V++DEE  FNRTL KG+  F K+   L
Sbjct:  473 QGKMSNYDTDVFTPLFAAIQRATGARAYTGKLGVDDADNIDMGYRVVADHIRTLTFAIADGAVPSNEGRGYVLRRVLRRAVRYGQQVLGGQPGFFHQLVPDVVDLMKVGFPDLEARQEFVMSVIKDEEEAFNRTLGKGVSHFEKVVSEL 621          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: D0UKM7_9ARAC (Alanine--tRNA ligase (Fragment) n=1 Tax=Stenochrus portoricensis TaxID=61974 RepID=D0UKM7_9ARAC)

HSP 1 Score: 187 bits (476), Expect = 2.450e-57
Identity = 92/155 (59.35%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    1 VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEVK 155
            V Q  +SNYDTD+FVPIF+AI+  TG +SY+GKVG+ED+D +DMAYRV+ADH+RTL+IA++DG RP N GRGYVLRRILRRAVRY  + L GKPG F +LVPVVV  L +IFPEL   ++ VMD++ DEE  F +TL +G +   +    LG+ K
Sbjct:   71 VIQNHSSNYDTDLFVPIFDAIQKSTGVKSYSGKVGQEDIDGIDMAYRVLADHVRTLAIALSDGGRPDNTGRGYVLRRILRRAVRYTIEKLNGKPGVFASLVPVVVNLLGDIFPELKKDQQTVMDIINDEESQFLKTLSRGHRLLQRTINKLGDQK 225          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: W7TIB5_9STRA (Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIB5_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.230e-57
Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0
Query:    3 QGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGL 151
            Q K SNYDTDIF+P+F+AI+ +TGA  Y GK+GK D ++ DMAYRVVADHIRTL+ AI DG  PSNDGRGYVLRRILRRAVRYG +VLG  PGFF  LV VVV  +K+IFPEL + EKRV++VL DEE  FNRTLD+G K F K+A  L
Sbjct:  273 QDKPSNYDTDIFMPLFDAIQELTGAPPYAGKLGKADPESRDMAYRVVADHIRTLTFAIADGAVPSNDGRGYVLRRILRRAVRYGAKVLGAAPGFFSKLVHVVVNQMKDIFPELEEKEKRVVEVLADEERAFNRTLDQGEKHFKKVADEL 421          
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Match: D0UKM0_PHRMA (Alanine--tRNA ligase (Fragment) n=1 Tax=Phrynus marginemaculatus TaxID=118542 RepID=D0UKM0_PHRMA)

HSP 1 Score: 186 bits (472), Expect = 9.880e-57
Identity = 90/154 (58.44%), Postives = 115/154 (74.68%), Query Frame = 0
Query:    1 VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVADHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTLVPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGGLGEV 154
            V Q K+SNYDTD+FVPIF+AI+  TG R Y+GKVGKED D +DMAYRV+ADH RTL++A++DG RP N GRGYVLRRILRRA+RY  + L GKPG F TLVP+VV  L +IFPEL    + V+D++ DEE  F +TL +G K   +    +G++
Sbjct:   71 VIQNKSSNYDTDLFVPIFDAIQKATGTRPYSGKVGKEDEDGIDMAYRVLADHARTLTVALSDGGRPDNTGRGYVLRRILRRAIRYATEKLNGKPGMFATLVPIVVDLLGDIFPELKKDPQTVIDIITDEENQFLKTLTRGRKLLERTINKMGDL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10012.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C8_9PHAE8.830e-7778.71Alanine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FPP9_ECTSI5.800e-7679.74Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S2Y168_9STRA4.390e-6672.60Alanine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6V2XN65_HETAK2.670e-6474.66Alanine--tRNA ligase n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z4U5_9STRA5.290e-6473.97Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S4GJP2_9EUGL6.870e-6065.77Alanine--tRNA ligase n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1IJB5_9EUGL2.490e-5865.10Alanine--tRNA ligase (Fragment) n=1 Tax=Eutreptiel... [more]
D0UKM7_9ARAC2.450e-5759.35Alanine--tRNA ligase (Fragment) n=1 Tax=Stenochrus... [more]
W7TIB5_9STRA3.230e-5767.79Alanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
D0UKM0_PHRMA9.880e-5758.44Alanine--tRNA ligase (Fragment) n=1 Tax=Phrynus ma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002318Alanine-tRNA ligase, class IIcPRINTSPR00980TRNASYNTHALAcoord: 71..84
score: 76.1
coord: 47..63
score: 54.3
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 3..148
e-value: 1.9E-48
score: 165.3
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 2..149
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 2..149
IPR018165Alanyl-tRNA synthetase, class IIc, core domainPROSITEPS50860AA_TRNA_LIGASE_II_ALAcoord: 1..155
score: 24.064
IPR018162Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilySUPERFAMILY101353Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)coord: 10..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10012contigH-paniculata_contig10012:1562..3380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10012.22.1mRNA_H-paniculata_contig10012.22.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10012 1562..3380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10012.22.1 ID=prot_H-paniculata_contig10012.22.1|Name=mRNA_H-paniculata_contig10012.22.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
VPQGKTSNYDTDIFVPIFEAIKAVTGARSYTGKVGKEDVDNVDMAYRVVA
DHIRTLSIAITDGIRPSNDGRGYVLRRILRRAVRYGHQVLGGKPGFFHTL
VPVVVISLKEIFPELVDAEKRVMDVLEDEEMTFNRTLDKGLKEFNKIAGG
LGEVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002318Ala-tRNA-lgiase_IIc
IPR018164Ala-tRNA-synth_IIc_N
IPR018165Ala-tRNA-synth_IIc_core
IPR018162Ala-tRNA-ligase_IIc_anticod-bd