mRNA_H-paniculata_contig966.17347.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: D8LC00_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC00_ECTSI) HSP 1 Score: 130 bits (326), Expect = 3.030e-33 Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 1 Query: 157 MGNEADYVKELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
M D V E+V + V V+SK+YCP C + K L +GAK+ ++E+D+VDNGSAIQDAL ITGQRSVPNVFIGG+ IGG DDT +L ++GEL+TK+ GA+
Sbjct: 1 MSEHVDAVNEMVGQHGVVVYSKTYCPFCTKAKKALKDVGAKYELIELDEVDNGSAIQDALQSITGQRSVPNVFIGGTSIGGGDDTVRLQKSGELLTKVTAVGAV 104
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: A0A6P3ZZT2_ZIZJJ (glutaredoxin-like n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZZT2_ZIZJJ) HSP 1 Score: 124 bits (312), Expect = 3.560e-31 Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
KE+V+SNPV VFSK+YCP+C K L T +GA F V+E+D +GS IQ ALAEITGQR+VPNVFIGG+ IGG D+T LH+ G+L+T L AGA+
Sbjct: 7 KEIVSSNPVVVFSKTYCPYCVTVKQLFTQLGATFKVIELDTESDGSEIQSALAEITGQRTVPNVFIGGNHIGGCDNTKALHKDGKLITLLTEAGAV 102
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: UPI0010A4FA54 (glutaredoxin n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4FA54) HSP 1 Score: 122 bits (305), Expect = 3.890e-30 Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
KE+V+SNPV VFSKSYCP C K LLT +GA + V+E+D +GS IQ ALAE TGQR+VPNVFIGG+ IGG D T LH G+LV+ L AGA+
Sbjct: 8 KEIVSSNPVVVFSKSYCPFCVDVKKLLTKLGANYKVIELDSESDGSEIQSALAEWTGQRTVPNVFIGGNHIGGCDSTTALHNQGKLVSLLTSAGAL 103
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: H3G9V5_PHYRM (Glutaredoxin domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3G9V5_PHYRM) HSP 1 Score: 120 bits (302), Expect = 9.080e-30 Identity = 55/99 (55.56%), Postives = 75/99 (75.76%), Query Frame = 1 Query: 172 DYVKELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
D V+ +A++PV V+SKSYCP+C +TK LLT +GAKF VVE+DQ++ GS QDAL ++TGQ +VPNVF+GG IGG D KLH++G+L L +GA+
Sbjct: 6 DTVEAQIAASPVVVYSKSYCPYCTKTKTLLTELGAKFEVVELDQINGGSEQQDALEDLTGQSTVPNVFVGGQSIGGNSDVRKLHKSGDLEPLLKHSGAL 104
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: A0A6J1BY96_MOMCH (glutaredoxin n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1BY96_MOMCH) HSP 1 Score: 120 bits (301), Expect = 1.380e-29 Identity = 60/96 (62.50%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
KE+V+SNPVAVFSKSYCP C K LLT +GA F VE+D+ +GS IQ ALA+ TGQR+VPNVFIGG IGG D T LH+ G LV L AGA+
Sbjct: 7 KEIVSSNPVAVFSKSYCPFCVDVKKLLTEVGASFKAVELDRESDGSEIQAALAQWTGQRTVPNVFIGGKHIGGCDATVALHKKGGLVPMLAEAGAV 102
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: A0A329S920_9STRA (GST N-terminal domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329S920_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.770e-29 Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 1 Query: 178 VKELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
V+ +A++PV V+SKSYCP+C +TK LLT +GAK+ VVE+DQ+D GS QDAL ++TGQ +VPNVF+GG IGG D KLH+AG L L +GA+
Sbjct: 8 VQAQIAASPVVVYSKSYCPYCTKTKTLLTELGAKYEVVELDQIDGGSEQQDALEDLTGQSTVPNVFVGGKSIGGNSDVRKLHKAGNLGPLLKESGAL 104
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: A0A0A0KR45_CUCSA (Glutaredoxin n=3 Tax=Cucumis TaxID=3655 RepID=A0A0A0KR45_CUCSA) HSP 1 Score: 120 bits (300), Expect = 1.930e-29 Identity = 59/96 (61.46%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
KE+VASNPVAVFSKSYCP C + K LLT +G F +E+D +G IQ ALA+ TGQR+VPNVFIGG IGG DDT L+ +G LV L AGAI
Sbjct: 7 KEIVASNPVAVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREIQAALAQFTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAI 102
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: A0A6D2L6S0_9BRAS (Glutaredoxin domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2L6S0_9BRAS) HSP 1 Score: 120 bits (300), Expect = 2.380e-29 Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
K+LV++N V VFSKS+CP+C R K LL +GAKF VE+D+ +GS IQ ALAE TGQR+VPNVFIGG IGG D T LH+ G+LVT L AGAI
Sbjct: 7 KDLVSNNAVVVFSKSFCPYCVRVKDLLKQLGAKFIAVELDKESDGSKIQSALAEWTGQRTVPNVFIGGKHIGGCDSTTNLHKNGKLVTLLTEAGAI 102
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: G4WMT5_WOLAR (Putative glutaredoxin-like protein n=1 Tax=Wolffia arrhiza TaxID=161111 RepID=G4WMT5_WOLAR) HSP 1 Score: 119 bits (299), Expect = 2.770e-29 Identity = 54/96 (56.25%), Postives = 75/96 (78.12%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
+E++AS+PV VFSK+YCP+C R K LLT +GA+F+V+E+D+ ++GS +Q ALA +TGQR+VPNVFIGG IGG D ++H G+LV L AGA+
Sbjct: 7 QEIIASDPVVVFSKTYCPYCTRVKKLLTELGARFNVIELDRENDGSQVQAALAGLTGQRTVPNVFIGGKHIGGCDTLTEIHRGGKLVPLLTEAGAL 102
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Match: A0A834TC98_9FABA (Glutaredoxin n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TC98_9FABA) HSP 1 Score: 119 bits (299), Expect = 2.940e-29 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 181 KELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVDNGSAIQDALAEITGQRSVPNVFIGGSPIGGADDTAKLHEAGELVTKLGGAGAI 468
KE+V +NPV VFSK+YCP C K LLT++GA F +E+D +GS IQ ALAE TGQR+VPNVFIGG+ IGG D T LH G+LV+ L AGAI
Sbjct: 8 KEIVETNPVVVFSKTYCPFCVDVKKLLTNLGANFKAIELDSESDGSEIQSALAEWTGQRTVPNVFIGGNHIGGCDSTTALHNQGKLVSLLTSAGAI 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig966.17347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig966.17347.1 >prot_H-paniculata_contig966.17347.1 ID=prot_H-paniculata_contig966.17347.1|Name=mRNA_H-paniculata_contig966.17347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp MGNEADYVKELVASNPVAVFSKSYCPHCKRTKALLTSIGAKFHVVEMDQVback to top mRNA from alignment at H-paniculata_contig966:1688..6762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig966.17347.1 ID=mRNA_H-paniculata_contig966.17347.1|Name=mRNA_H-paniculata_contig966.17347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5075bp|location=Sequence derived from alignment at H-paniculata_contig966:1688..6762+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig966:1688..6762+ >mRNA_H-paniculata_contig966.17347.1 ID=mRNA_H-paniculata_contig966.17347.1|Name=mRNA_H-paniculata_contig966.17347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=630bp|location=Sequence derived from alignment at H-paniculata_contig966:1688..6762+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |