mRNA_H-paniculata_contig9648.17338.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: D8LTU1_ECTSI (DAO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTU1_ECTSI) HSP 1 Score: 156 bits (394), Expect = 5.920e-44 Identity = 81/106 (76.42%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSPAPWLDGQASGTMMDPATAQVS 318 GASTAYHL+LRGVK +V+ERS VAAAASGKAGGFLAGGWGSGPTV MHE+SF+MHE LAE LGVTSYRKIPTL + R G SPA WLDG+ASG++MD TAQV+ Sbjct: 21 GASTAYHLALRGVKPIVIERSNVAAAASGKAGGFLAGGWGSGPTVPMHEISFDMHEKLAETLGVTSYRKIPTLSVNG-GRGGSSPAAWLDGKASGSLMDSDTAQVT 125
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A835ZIK8_9STRA (FAD dependent oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK8_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.040e-33 Identity = 66/105 (62.86%), Postives = 82/105 (78.10%), Query Frame = 1 Query: 4 ASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSPAPWLDGQASGTMMDPATAQVS 318 AS AYHL+ +GVK +VLERS+VAAAASGK+GGFLA WGSGP V++H SF +HE LA+EL V S+RK+PTL RKGK+ A WLDG+AS ++MD TAQV+ Sbjct: 21 ASIAYHLTQKGVKPIVLERSEVAAAASGKSGGFLARDWGSGPAVQLHTASFALHEKLAKELTVESFRKLPTLSVKVGGRKGKNAASWLDGKASSSLMDDGTAQVT 125
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A7S0QTC4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTC4_9CRYP) HSP 1 Score: 122 bits (307), Expect = 4.650e-33 Identity = 70/110 (63.64%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGP-TVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSF--SRKGKSPAPWLDGQ-ASGTMMDPATAQVS 318 GAS AYHLS RGV+ LV+ERSKV AAASGKAGGFLAGGWG G T ++H VSF MHE LA+ELG+ S+RKI TL + KGK P WLDGQ A ++MD TAQV+ Sbjct: 80 GASIAYHLSKRGVQPLVVERSKVGAAASGKAGGFLAGGWGDGSVTQQLHRVSFRMHEELAKELGIKSFRKIETLSVTGGRGGAKGKMPVSWLDGQIAKASLMDKWTAQVT 189
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A0G4HCU1_9ALVE (DAO domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HCU1_9ALVE) HSP 1 Score: 117 bits (294), Expect = 4.350e-29 Identity = 66/109 (60.55%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKAL---VLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSPAPWLDGQASGTMMDPATAQVS 318 G STAYHL+ +G +L V+ERS VAAAASGKAGGFLA WGSGPT +H++SF MH LA+EL + S+R I TL S RKGK+ APWL+G+AS T MD TAQV+ Sbjct: 67 GVSTAYHLAKKGGNSLDITVVERSGVAAAASGKAGGFLARDWGSGPTDALHKISFRMHAELAKELNIESFRPIQTLSVSG-GRKGKNAAPWLNGKASSTHMDSNTAQVT 174
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A1Q9D1J6_SYMMI (Putative oxidoreductase C1F5.03c n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D1J6_SYMMI) HSP 1 Score: 107 bits (267), Expect = 3.400e-27 Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSP--APWLDGQ-ASGTMMDPATAQVS 318 GA+ AY L+ RGVK +V+ER KVAAAASGK GGFLA WG T ++H VSF +HE LAE LG+ SYRK+P L A+ R ++ PWLDG+ A +MDP AQ S Sbjct: 64 GAALAYFLTRRGVKPVVVERDKVAAAASGKGGGFLARDWGDSITRKLHTVSFKLHEELAETLGIESYRKLPVLSAAPGPRSDRTSDMCPWLDGEVADARVMDPNGAQAS 172
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A7S1DMN2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMN2_HEMAN) HSP 1 Score: 108 bits (269), Expect = 7.500e-27 Identity = 65/108 (60.19%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 25 SLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSR---------KGKSPAPWLDGQASGT-MMDPATAQVS 318 S RGV V+ERSKVAAAASGKAGGFLA GWGSGPT ++HEVSF++HE LAEEL + YRK+PTL S R KG+ P WLDGQ S MMD TAQ + Sbjct: 102 SKRGVVPTVVERSKVAAAASGKAGGFLARGWGSGPTRQLHEVSFDLHETLAEELKLEGYRKLPTLSVSGGKRGAGVDKSIEKGEVPQ-WLDGQVSSARMMDTDTAQTT 208
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A7S3AF44_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AF44_9EUKA) HSP 1 Score: 110 bits (274), Expect = 1.760e-26 Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSP--APWLDGQA--SGTMMDPATAQVS 318 GA+ AY+L+LRGVK L+++R VAAAASGK GGFLA WGSGPTV +H+VSF +HE LA+EL + SYRKIP L + R ++ PWLDG+ S M D AQV+ Sbjct: 18 GAALAYYLTLRGVKPLIVDRHSVAAAASGKGGGFLARDWGSGPTVALHKVSFALHEELAKELDIQSYRKIPVLSVAPGKRTKRTTDLCPWLDGEIRDSSMMDDEGGAQVA 127
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A7S1J696_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J696_9EUGL) HSP 1 Score: 110 bits (274), Expect = 4.540e-26 Identity = 61/108 (56.48%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSPA-PWLDGQ-ASGTMMDPATAQVS 318 GAS AY+L+L+G K V+ER +VAAAA GK GGFLAGGWG G T ++H SF +HE LA EL + SYRKIPT+ + SR S WLDG A+ +MDP TAQV+ Sbjct: 111 GASIAYYLTLKGFKPTVVERKEVAAAAGGKGGGFLAGGWGYGVTEQLHTKSFELHEELARELDLKSYRKIPTISVCAGSRPNPSKVCSWLDGNIATSRLMDPNTAQVT 218
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A7S3ZGY1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZGY1_9EUKA) HSP 1 Score: 100 bits (249), Expect = 3.500e-25 Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 49 VLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSPAP---WLDGQASGT-MMDPATAQVS 318 V+ER KVA AASGKAGGFLA GWGSGPT +H+V F +H+ LA+EL + S+R +PTL S+ RK K A WLDG SG MMDP TAQV+ Sbjct: 1 VVERWKVAGAASGKAGGFLAKGWGSGPTEALHQVGFELHKKLAQELKMKSFRHLPTLNVSTGGRKMKGAASKCKWLDGHVSGCKMMDPNTAQVT 94
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Match: A0A813DZI3_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DZI3_POLGL) HSP 1 Score: 104 bits (259), Expect = 5.640e-25 Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 1 GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVSFNMHEHLAEELGVTSYRKIPTLQASSFSRKGKSP--APWLDGQASGTMM 294 GA+ AY L+LRGVK +V+ER KVAAAASGK GGFLA WG T ++H VSF +HE LAE LG+ SYR++P L S R ++ PWLDG+ S T + Sbjct: 83 GAALAYFLTLRGVKPVVVEREKVAAAASGKGGGFLARDWGDAITRQLHRVSFKLHEELAETLGIQSYRRLPVLSVSPGQRSSRTRDICPWLDGEISDTQI 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9648.17338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9648.17338.1 >prot_H-paniculata_contig9648.17338.1 ID=prot_H-paniculata_contig9648.17338.1|Name=mRNA_H-paniculata_contig9648.17338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp GASTAYHLSLRGVKALVLERSKVAAAASGKAGGFLAGGWGSGPTVRMHEVback to top mRNA from alignment at H-paniculata_contig9648:3897..4818+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9648.17338.1 ID=mRNA_H-paniculata_contig9648.17338.1|Name=mRNA_H-paniculata_contig9648.17338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=922bp|location=Sequence derived from alignment at H-paniculata_contig9648:3897..4818+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9648:3897..4818+ >mRNA_H-paniculata_contig9648.17338.1 ID=mRNA_H-paniculata_contig9648.17338.1|Name=mRNA_H-paniculata_contig9648.17338.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig9648:3897..4818+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |