mRNA_H-paniculata_contig9645.17334.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 535 bits (1378), Expect = 2.500e-179 Identity = 297/492 (60.37%), Postives = 355/492 (72.15%), Query Frame = 3 Query: 153 RNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEP 1619 ++ + L+ A + + NEPIP+PEC+ S V++RYS+ RLY+E+ ++ RGGCV+L +I+E + G +PLYAVD +SG SD+ATGTWLLTE+L+VEDGITL VHG GDADELR+LS T +NLRAHGGSL FL+TKV +WD D + DGRSYVS +SEVI DD + TC G KNNMGEARMDI DSE+GYLGY+ SESYGLTWKVRGFC + SN ++F+ VNVYGNIY+S IH N FG+YTYGHQQGDWR N M+DN YGFDPHDDSD L IHDN V+ NG HGIIASKRCN + XXXXXXXXXXXXXXXX ES+NA+V+DN+FENNKYGIRFSVGS NVF +N+I ST+Y YSY GSD P V +GRSQDNVF N I GG+E+IKL ++DGT FIDNTF+ TTIRFND+ + LM GN GL +KV NGA FD SD FEP Sbjct: 7 KSALVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDD-SQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSDYGFEP 497
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 3.990e-173 Identity = 271/500 (54.20%), Postives = 341/500 (68.20%), Query Frame = 3 Query: 165 IATLSFASALTQTVTAE----NEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTT----IRFNDSTEVLMMGNTGLEYVD--VKVNNGACFDDDSDSEFEPTC 1625 +A L ++ T A+ N+PI +P+C++ V++RY+ T+ RLY+E+ + RGGC +L +I+E R G +PLYAVDP+SG S+ TGTWLLTE+LYVEDGITL V+G E GDADELR+LS T +NLRAHGGSL F+ TKV SWD + D + TDGRSY+S +SE++ D+ + TCEGN KN MGEARMDI +SE+GYLG+ SESYGLTWKVRGFC + SNPEIFD VNVYGN+Y+S IH FG+YTYGHQQGDWR N M+DN YGFDPHDDSD L IHDN V+ NG HGIIASKRCN + ES+NA+V++N FENNKYG+R SVG DNVFS+NII N++KY Y+Y GSD P V ++GRSQ+NVFS N SG ETIK+KE+DGT F+DN F+ +RF+D+ +M GNTGL+ D +KV N +CFD +SDS +EP C Sbjct: 14 LALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDE-DETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 511 bits (1315), Expect = 2.960e-170 Identity = 265/467 (56.75%), Postives = 321/467 (68.74%), Query Frame = 3 Query: 228 PQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEP 1619 P+P+C++S V++RY+ SARLYIE+ RGGCV+L +I+EQ+ SPLYAVDP+SG S +ATGTWLLTE++YVEDGITL VHG GDADELR+LS T ++LRA+GGSL FL+TKV +WD D + +DGRSY+S +SEVI DD TC G KNNMGEARMDI +SE+ YLGY+ +E+YGLTWKVRGFC + NPE+FD VNVYGNIY+S IH N FG+YTYGHQQGDWR N M+DN YGFDPHDDSD L IHDN VW NG HGIIASKRCN + ES+NA+V+DN FENNKYG+R SVG N+FS N+I S ++ +SY G+D P V +GRSQDNVF N I GG+E+I LKE+DGT FIDNTF IRF D+T+ LM GNTGL +KV+ GA FD+ SD FEP Sbjct: 6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDD-RQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSDHGFEP 471
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 511 bits (1317), Expect = 4.940e-170 Identity = 268/466 (57.51%), Postives = 328/466 (70.39%), Query Frame = 3 Query: 258 VTLRYSNTSARLYIEAGEAGE-RGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHGGE-DGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTT----IRFNDSTEVLMMGNTGLE--YVDVKVNNGACFDDDSDSEFEPTC 1625 V++RY+ T+ARLY+E+ + G RGGCV+L +I+E R G PLYAVDP+SG S +ATGTWLLTE+LYVEDGITL V+G E GDADELR+LS T +NLRAHGGSL F++TKV SWD + D + TDGRSY+S ISE+I D+ + TCEGN KN MGEARMDI SE+GYLGY SESYGLTWKVRGFC + SNPE+FD VNVYGN+Y+S IH FG+YTYGHQQGDWR N M+DN YGFDPHDDSD L IHDN V+ NG HGIIASKRCN + ES+NA+V++N FENNKYG+RFSVG DNVFS+N I N+ +Y YSY G+D P V ++GRSQ+NVFS N SG ETIK+KE+DGT F+DN F+ +RF+++TE LM GNTGL+ ++KV+N ACFD ++DS +EP C Sbjct: 44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDE-DETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 493 bits (1268), Expect = 8.100e-163 Identity = 271/497 (54.53%), Postives = 327/497 (65.79%), Query Frame = 3 Query: 144 MVRRNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC 1625 M+R + L+ A + N+ I +P C +S V++RYS TS RLY+E+ + RGGCV+L +I+ G +PLYAV P SG S + TGTWLLTE LYVEDGITL VHG G ADELR+LS +NLRAHGGSL F++TKV +WD T+ + GRSY+S +SEVI D C+G K NMGEARMDI DSE+ YLGY SESYGLTWKVRG C + SN E+FD VNVYGNIY+S IH NYFG+YTYGH+QGDWR N M+ N +YGFDPHDDSD L IHDN V+ NGNHGIIASKRCN XXXXXXXXXX E++NA+V++N FE+NKYGIR SVG DNVFS N I S+KY VY+Y+GSD P+V +GRSQD SGG ET+KL +DGT FIDNTF + TIRF D LM GN+GL +KV +G+CFD SDS ++P C Sbjct: 4 MLRAFAVMTLLAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDS-KQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 481 bits (1237), Expect = 3.940e-158 Identity = 268/497 (53.92%), Postives = 334/497 (67.20%), Query Frame = 3 Query: 144 MVRRNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC 1625 M+R ++ L+ A +++N+ I +P C +S V++RYS +S RLY+E+ + RGGCV+L EI++ G++PLYAV P SG S +ATGTWLLTEDLYVEDGITL VHG G+A+ELR+LS +NLRAHGGSL F++TKV +WD T+ + RSY+S +SE+I D C+G K MGEARMDI DSE+ YLGY SESYGLTWKVRGFC +GSNPE+FD VNVYGNIY+S IH N+FG+YTYGH+QGDWR N M+ N +YGFDPHDDSD L IHDN V XXXXXXXXXX XXXX ES+NA+V++N FE+NKYG+R SVG DNVFS N+I +S+KY VY+YEGSD P+V +GRSQDN+FS N I+GG E+IKL +DGT FIDNTF T RF D+ LM GNTGL +KV+ GACFD SDS+++P C Sbjct: 7 MLRTAAIVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDS-KEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 1.250e-155 Identity = 253/475 (53.26%), Postives = 314/475 (66.11%), Query Frame = 3 Query: 216 NEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNS------PLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVP-------GTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLE-YVDVKVNNGACF 1589 N PIP+PECN+++ V++RYS T+ RLY+EAG GERGGCV++ +I+E RGG + PLYAVDP SG SD TGTWLL EDLYVEDGITL V G G G ADELR+ S P GT +NLRAHGGSL F +TKV WD +YD + TDGRSY+S +SE++ D TCEGN KN MGEARMDIV+SE+GY+G++ SESYGLTWKVRGFC + SNPE+FD VNVYGNIY+S++H F +YTYGHQQGDWR N ++ N YG+DPHDDSD L IHDN V+ N HGIIASKRCNN ES NA ++ N+FE NKYGIR SVG DN S+N + N+++Y +Y+Y+GSD V TGRSQDN+F N + GG + IKLKESDGT +N F + F+++TE ++ GN GLE +V++ ACF Sbjct: 107 NTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPT-QTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 409 bits (1050), Expect = 1.180e-131 Identity = 212/361 (58.73%), Postives = 254/361 (70.36%), Query Frame = 3 Query: 258 VTLRYSNTSARLYIEAGEAGE-RGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHGGE-DGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTK 1328 V++RY+ ++ARLY+E+ + G RGGCV+L +I+E R G PLYAVDP+SG S +ATGTWLLTE+LYVEDGITL V+G E GDADELR+LS T +NLRAHGGSL F++TKV SWD + D + TDGRSY+S ISE+I D+ + TCEGN KN MGEARMDI SE+GYLGY SESYGLTWKVRGFC + SNPE+FD VNVYGN+Y+S IH FG+YTYGHQQGDWR N M+DN YGFDPHDDSD L IHDN V+ NG HGIIASKRCN + ES+NA+V++N FENNKYG+RFSVG DNVFS+N I N+ + Sbjct: 44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDE-DETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 382 bits (981), Expect = 2.710e-122 Identity = 188/296 (63.51%), Postives = 230/296 (77.70%), Query Frame = 3 Query: 168 ATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHG 1052 AT+ A+A T + N+PI +P+C++ V++RY++++ RLY+E+ + RGGCV+L +I+E R G +PLYAVDPESG S+N TGTWLLTE+LYVEDGITL V+G GE GDADELR+LS T +NLRAHGGSL F+ TKV SWD + D + TDGRSY+S ISE+I D+ + TCEGN KN MGEARMDI +SE+GYLG+ SESYGLTWKVRGFC + SNP IFD VNVYGN+Y+S IH FG+YTYGHQQGDWR N M+DN YGFDPHDDSD L IHDN V+ NGNHG Sbjct: 21 ATMRAAAADTA---SPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDE-DETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 350 bits (899), Expect = 2.170e-110 Identity = 188/311 (60.45%), Postives = 225/311 (72.35%), Query Frame = 3 Query: 699 CEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC 1625 C G K MGEARMDI DSE+ YLGY SESYGLTWKVRGFC +GSNPE+FD VNVYGNIY+S IH N+FG+YTYGH+QGDWR N M+ N +YGFDPHDDSD L IHDN V+ NGNHGIIASKRCN XXXXXXXXXX XX ES+NA+V++N FE+NKYG+R SVG DNVFS N+I +S++Y VY+YEGSD P+V +GRSQDN+FS N I+GG E+IKL +DGT FIDNTF + T+RF D+ + +M GNTGL +KV+ GACFD SDS+++P C Sbjct: 15 CNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 325 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9645.17334.1 >prot_H-paniculata_contig9645.17334.1 ID=prot_H-paniculata_contig9645.17334.1|Name=mRNA_H-paniculata_contig9645.17334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=495bp MVRRNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLback to top mRNA from alignment at H-paniculata_contig9645:862..7538+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9645.17334.1 ID=mRNA_H-paniculata_contig9645.17334.1|Name=mRNA_H-paniculata_contig9645.17334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6677bp|location=Sequence derived from alignment at H-paniculata_contig9645:862..7538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9645:862..7538+ >mRNA_H-paniculata_contig9645.17334.1 ID=mRNA_H-paniculata_contig9645.17334.1|Name=mRNA_H-paniculata_contig9645.17334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2970bp|location=Sequence derived from alignment at H-paniculata_contig9645:862..7538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |