mRNA_H-paniculata_contig9619.17317.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE) HSP 1 Score: 460 bits (1183), Expect = 2.420e-161 Identity = 218/245 (88.98%), Postives = 236/245 (96.33%), Query Frame = 1 Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 VRILRSL HPNVIDIYQFF+DDPD+YYV+IE+MRGGELFDRIV+KA+YNEKEARDLCRILLDAV+YCHD GIVHRDLKPENLLLTSQHDDANVKLADFGFARS++ G+VSTQCGTPGYVAPEIL+AE+YGTSVDMWSIGVI+YILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYW S S+EA+DLIR+LLTVDPKKRLTA AVTHPWLLSKD DLL +NLGVNLEQL+LFNARRKLRAAIKSV Sbjct: 107 VRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSV 351
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA) HSP 1 Score: 394 bits (1013), Expect = 9.080e-136 Identity = 187/245 (76.33%), Postives = 214/245 (87.35%), Query Frame = 1 Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 V+ILR LNHPN+IDIYQF++ + D+YYV IE+MRGGELFDRIV+K +Y EKEARDLC+ILLDA+KYCHD IVHRDLKPENLLLTS DDA++KLADFGFA+++ V+TQCGTP YVAPEIL+ YGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKI+AG F+FH EYWGS+S++A+DLI +LLTVD RLTA AV+HPWLL+ DTDL NLG NLEQLKLFNARRKLRAAIKSV Sbjct: 89 VKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSV 333
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI) HSP 1 Score: 390 bits (1002), Expect = 1.910e-133 Identity = 184/245 (75.10%), Postives = 210/245 (85.71%), Query Frame = 1 Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 VRILR L H NV+ IYQFFQDDPD+YY+ +E M GGELFDRIVQK+YYNE+EARDLCR+LLD+V+YCH+ GIVHRDLKPENLLLTS+HDDA +KLADFGFA SVL G VS QCG+PGYVAPEIL+A YGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW + S EA+DLIRKLL VDP KR+TA A HPWLL+ L +NLG NL+QL++FNA RKLR AI+SV Sbjct: 131 VRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 375
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE) HSP 1 Score: 346 bits (888), Expect = 1.850e-118 Identity = 164/218 (75.23%), Postives = 187/218 (85.78%), Query Frame = 1 Query: 82 VAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 + +E M GGELFDRIVQK YYNE+EARDLCR+LLD+VKYCH+ GIVHRDLKPENLLLTS+HDDA +KLADFGFA SVL G VS QCG+PGYVAPEIL+A YGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW + S EA+DLIRKLL VDP KR+TA A HPWLL+ L ++NLG NL+QL++FNA RKLR AI+SV Sbjct: 1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSV 218
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI) HSP 1 Score: 357 bits (916), Expect = 1.440e-116 Identity = 165/243 (67.90%), Postives = 201/243 (82.72%), Query Frame = 1 Query: 7 ILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 I+R L+HPN++ IY F+QDDP +Y+ +E M GGELFDRIVQK YYNE EARD+C L+A+KY H G+VHRDLKPENLLL S+ DD++++LADFGFA SVL GYV+ QCGTPGYVAPEIL++ YGTSVDMWSIGVIIYI+L GYPPFHDE+Q RL+RKIKAG+++F PEYW VS+EA+DLIRKLLTVDP +RLTA A HPWL + +L ++LG LE+LK+FNA RKLRAAI+SV Sbjct: 429 IMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSV 671
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA) HSP 1 Score: 338 bits (866), Expect = 3.320e-113 Identity = 161/246 (65.45%), Postives = 192/246 (78.05%), Query Frame = 1 Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGY-VSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 V IL+ ++HPN+I +Y+FF++ YY+ IE M GGELFDRIVQK YYNEKEARDL ILL A+K+CHD GIVHRDLKPENLLLTS DDA++K+ADFGFAR V + ++TQCGTPGYVAPEIL YG +VDMWSIGVI YILLGGYPPFHDE Q+ LF KI+AG+F FHPEYW VS EA+DLIRKLLTVDP KR+TA A+ HPW+ D L NL L +L+ FNARRK R+ +K++ Sbjct: 76 VTILKHVDHPNIIKLYEFFEEK-HFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAI 320
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE) HSP 1 Score: 346 bits (888), Expect = 2.700e-112 Identity = 160/243 (65.84%), Postives = 198/243 (81.48%), Query Frame = 1 Query: 7 ILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 I+ LNHPN++ IY F++D+P +Y+ +E M GGELFDRIVQK YYNE EARD+C +L+A+KY H G+VHRDLKPENLLL S+ DD++++LADFGFA SVL GYV+ QCGTPGYVAPEIL+ YGTSVDMWSIGVIIYI+L GYPPF DE+Q RL+RKIKAG+++F PEYW VS+EA+DLIRKLL VDP +RLTA A HPWL + +L ++LG LE+LK+FNA RKLRAAI++V Sbjct: 424 IMHELNHPNLVTIYDFYRDNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA) HSP 1 Score: 317 bits (812), Expect = 2.250e-106 Identity = 146/240 (60.83%), Postives = 188/240 (78.33%), Query Frame = 1 Query: 16 SLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 LNHPN+I+ Y FF+++ + YYV +E+M GGELFDRIV+K YNEKEARD+ +IL+ A+KYCHD +VHRDLKPENLLLTS+ DDA++K+ADFGFA V +STQCGTPGY+APEIL+ + YG +VDMWSIGVI YI+LGGYPPFHD+N LFRKI+ G+F+FHPEYW +VS++A++LI+ LLTV+ RLTA + HPWL++ D L NL NL + K FNA R+ + A K+V Sbjct: 1 QLNHPNIINCYDFFEEEKN-YYVVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAV 239
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK) HSP 1 Score: 318 bits (814), Expect = 1.020e-105 Identity = 149/245 (60.82%), Postives = 189/245 (77.14%), Query Frame = 1 Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 V ILR ++HPN+I ++ FF++ YY+ E M+GGELFDRIV+K +YNEKEARDL +ILL AVKYCHD IVHRDLKPENLLL+S DDA++K+ADFGFAR + ++TQCGTPGYVAPEIL YG SVDMWS GVI YILLGGYPPFHDE Q+ LF KI++G+++FHPEYW +VS +A+DLI+K+LTVD +R+TA A HPW+ + L L NL +L+ FNARRK R+ +K++ Sbjct: 78 VTILRGISHPNIIKLFDFFEEK-HFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARLLRGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEKQSNLFAKIRSGSYEFHPEYWQNVSKDAQDLIKKMLTVDIAQRITAEAACNHPWVQADADVLAKRGLDGNLTELRRFNARRKFRSGVKAI 321
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match: A0A8J2S556_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S556_9STRA) HSP 1 Score: 317 bits (812), Expect = 1.690e-105 Identity = 147/245 (60.00%), Postives = 188/245 (76.73%), Query Frame = 1 Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735 V +LRS++HPN++ +Y FF D+ +YY+AIE M GGELF+RIV+K +YNE +AR L RILLDA+ Y H GIVHRDLKPENLLL S +D ++KLADFGFA+ V + TQCGTPGYVAPEILK + YGT+VDMWS GVI+YILLGGYPPFHD+N L+RKIKA ++ F P+YW VS +A+DLI+K+L VDP KRLTA A+ HPW + D +L++ NL L+ +K FNARRK + +K + Sbjct: 74 VAVLRSVDHPNIVKLYDFF-DEKRYYYMAIELMEGGELFERIVKKTFYNEMDARGLVRILLDALAYLHHRGIVHRDLKPENLLLKSPFNDFDIKLADFGFAKKVEGKSLDTQCGTPGYVAPEILKGKKYGTAVDMWSCGVIVYILLGGYPPFHDDNHAVLYRKIKAADYAFDPQYWDQVSDDAKDLIKKMLVVDPDKRLTASQALRHPWFMVGDHELISRNLAKTLDTMKKFNARRKFKGKVKGI 317 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9619.17317.1 >prot_H-paniculata_contig9619.17317.1 ID=prot_H-paniculata_contig9619.17317.1|Name=mRNA_H-paniculata_contig9619.17317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEback to top mRNA from alignment at H-paniculata_contig9619:1274..4349+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9619.17317.1 ID=mRNA_H-paniculata_contig9619.17317.1|Name=mRNA_H-paniculata_contig9619.17317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3076bp|location=Sequence derived from alignment at H-paniculata_contig9619:1274..4349+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9619:1274..4349+ >mRNA_H-paniculata_contig9619.17317.1 ID=mRNA_H-paniculata_contig9619.17317.1|Name=mRNA_H-paniculata_contig9619.17317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig9619:1274..4349+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |