mRNA_H-paniculata_contig9614.17315.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: D7G521_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G521_ECTSI) HSP 1 Score: 407 bits (1045), Expect = 1.430e-128 Identity = 273/353 (77.34%), Postives = 290/353 (82.15%), Query Frame = 1 Query: 1 RAKKAELAASYLLWTSDPIHKSLMDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEEDVVSVKPTRAPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------DPQAKVLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYLEMQ 978
RAKKAELA+S+L WTSDPIHKSL DVSGLKGEAKKQFKN+LGYCGDRKYQYPD LIRDI AKGLEMTELRGELYVQAMKQLTKN PAS RCWEV+T LL CFPPPK++ENYVHYFVRCN P++TREKFKLAVHMSVYDG K TAPSVKEIPPLLSGFF+REI+ARYNIEEDVVSVKPTR PPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PQA+VLYDYDPAGQEGMV VSAGQMV + ++D+PDWWMA+ D G EGWVPANYLEMQ
Sbjct: 40 RAKKAELASSFLEWTSDPIHKSLTDVSGLKGEAKKQFKNMLGYCGDRKYQYPDPLIRDIVAKGLEMTELRGELYVQAMKQLTKNANPASVQRCWEVVTMLLTCFPPPKDMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISARYNIEEDVVSVKPTRPPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGYGQPAAGTNGGGADPAMXXXXXXXXXXXXXXXXPSEPQARVLYDYDPAGQEGMVAVSAGQMVGVTNRDNPDWWMASLDGGVEGWVPANYLEMQ 392
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 1.270e-115 Identity = 259/353 (73.37%), Postives = 278/353 (78.75%), Query Frame = 1 Query: 1 RAKKAELAASYLLWTSDPIHKSLMDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEEDVVSVKPTRAPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------DPQAKVLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYLEMQ 978
+AKKAELA+S+L WTSDPIHKSL DVSGLKGEAKKQFKN+LGYCGDRKYQYPD LIRDI AKGLEMTELRGELYVQAMKQLTKN PAS R WEV+T LL CFPPPK++ENYVHYFVRCN P++TREKFKLAVHMSVYDG K TAPSVKEIPPLLSGFF+REI+ARYNIEEDVVSVKPTR PPSRPGWAAAXXXXXXXXXXXXXXXXXX XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX +PQA+VLYDYDPAGQEGMV VSAGQ+V + ++D+PDWWMA+ D G EGWVPANYLEMQ
Sbjct: 1033 KAKKAELASSFLEWTSDPIHKSLTDVSGLKGEAKKQFKNMLGYCGDRKYQYPDPLIRDIVAKGLEMTELRGELYVQAMKQLTKNANPASVQRYWEVVTMLLTCFPPPKDMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISARYNIEEDVVSVKPTRPPPSRPGWAAAXXXXXXXXXXXXXXXXXXGSSNGGXXXXXXXSAPPAANSTAAXXXXXXXXXXXXXXXXXXXXXXXXGGYGQQAAITNGGGADPAMXXXXXXXXXXXXXXXXPSEPQARVLYDYDPAGQEGMVAVSAGQVVGVTNRDNPDWWMASLDGGVEGWVPANYLEMQ 1385
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 283 bits (723), Expect = 6.340e-75 Identity = 190/325 (58.46%), Postives = 222/325 (68.31%), Query Frame = 1 Query: 1 RAKKAELAASYLLWTSDPIHKSLMDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSGFFKREITARYNIEEDVVSVKPTRAPPSRPGWAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQAKVLYDYDPAGQEGMVPVSAGQMVSIKSQDSPDWWMAATDDGREGWVPANYLEM 975
+ KA+LA +L T++PIHKSL+ VSGLKGEA KQFKNLLGY GDRKYQYPD L+ +I AKGLE+ LR ELYVQAMKQLT NP P S+ RCWEV+ LLH FPPP+++ENYVH FVR P R+K KLAVHMSV +GAK AP +EIP +L FF R I RYNIE+DVVS P R GW AAXXXXXXXXXXXXXXXX XXXXXXXXXXXXX XXXXXXXXXX P A+ LYDYDPAGQ GM+ + GQ + IK ++ DWWMA T+ G++GWVPA+Y+++
Sbjct: 1145 KKSKADLARGFLSHTTEPIHKSLLRVSGLKGEALKQFKNLLGYAGDRKYQYPDPLLHEIVAKGLEVPTLRSELYVQAMKQLTDNPNPQSEQRCWEVLMLLLHTFPPPEDVENYVHAFVRARAPAGQRDKLKLAVHMSVVEGAKAAAPPEREIPAILGAFFDRAIEPRYNIEQDVVSAAPPPRRAERAGWGAAXXXXXXXXXXXXXXXXYQNGAAAAATPYGAXXXXXXXXXXXXXPLXXXXXXXXXXSA--------------------PTARALYDYDPAGQAGMLALRMGQALVIKDREGADWWMAETE-GQQGWVPASYVQL 1448
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A7S3YT57_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YT57_9EUKA) HSP 1 Score: 119 bits (298), Expect = 2.360e-23 Identity = 56/157 (35.67%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 10 KAELAASYLLWTSDPIHKSLMDVSGLKG-EAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQET-REKFKLAVHMSVYDGAKGTAPSVKEIPPLLSG 474
+ EL + WT PIH SL+++ G G +A + F+NLLG+ GDR+Y +P+ L+++I +G++ LR EL+ Q +KQ+T+NP S + W M L FPP E ENY ++R N+ E R ++ +H +++ GA+ PS ++ +++G
Sbjct: 1196 REELQRTMFRWTKSPIHASLIELPGRLGKDATRMFRNLLGFMGDRQYNFPELLLKEILEQGIQNPPLRDELFAQIIKQITQNPDNQSSHKGWSAMAVCLESFPPQPEFENYFEVWIRKNIKDEAKRTRYLTLLHQAIFCGARQFPPSEGDMKRIMAG 1352
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A7S2WSL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WSL5_9STRA) HSP 1 Score: 103 bits (258), Expect = 8.620e-21 Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 10 KAELAASYLLWTSDPIHKSLMDVS-------GLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVY-DGAKGTAPSVKEIPPLLSGF 477
K +A L WT+ PIH SL+D L AK FK +LGY GDRKY Y DAL D+ GLE LR E+++Q MKQLT+NP+ SQ + W+++ P P ++E Y+ +++ N P + ++ F A+H Y P+++++P + F
Sbjct: 6 KEGVALKMLRWTNRPIHTSLVDYPKSTKDTVSLVKRAKMIFKAILGYMGDRKYPYTDALACDVLTAGLEEPRLRAEIFIQLMKQLTENPSQDSQAKGWDLLGLCAMTLPLPDDIEFYLSLWLQQNAPAKGQKYFS-AIHALQYGSNTSREKPTLRDVPLMRQEF 168
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A7S4IN46_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IN46_9EUKA) HSP 1 Score: 109 bits (272), Expect = 2.540e-20 Identity = 52/150 (34.67%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 10 KAELAASYLLWTSDPIHKSLMDVSGL-KGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEI 456
K ++ + W+ PIH L + L + ++ FKN++G+ GDR +P+ L R++ KG++ ELR E+Y+Q +KQ+T NP P+S ++ +++M LHCFPP E ENY+ + R N + A+H V+ G PS ++I
Sbjct: 1275 KDKVKEQMMNWSKHPIHAPLTRIPNLFQKDSVLSFKNIMGFMGDRVMSFPNMLAREVLEKGIQQPELRDEIYIQLIKQVTVNPNPSSTEKGYKMMNMCLHCFPPSTEFENYLEIYFR-NKGDSKSNDLRKALHQIVWSGPVAVPPSPEQI 1423
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A7S0GZ93_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GZ93_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 2.230e-16 Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 19 LAASYLLWTSDPIHKSLMDVSGLKGE-AKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSG 474
LA S L +T+ PIH +L + + A K FKNL+G+ GDR Y+ L ++I +GLE ++R EL++ +KQLT NP+P S++R W+ ++ LLH F PP L+N++ ++ N +E + K ++ ++Y G + + S E ++ G
Sbjct: 218 LAQSMLKFTTYPIHAALTETNAKSNNLAIKLFKNLMGFMGDRTYKNAVLLSQEICKEGLENEDIRDELFLHTIKQLTANPSPKSRERGWQHLSLLLHTF-PPSGLDNFLDKWIMDNA-KERKAKLLHILYATLYTGKRYSPLSDDETKNVMDG 368
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A7S0H1X2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H1X2_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 5.450e-16 Identity = 54/153 (35.29%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 19 LAASYLLWTSDPIHKSLMDVSGLKGE-AKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCNVPQETREKFKLAVHMSVYDGAKGTAPSVKEIPPLLSG 474
LA S L +T+ PIH +L + + A K FKNL+G+ GDR Y+ L ++I +GLE ++R EL++ +KQLT NP+P S++R W+ ++ LLH F PP L+N++ ++ N +E + K ++ ++Y G + + S E ++ G
Sbjct: 2608 LAQSMLKFTTYPIHAALTETNAKSNNLAIKLFKNLMGFMGDRTYKNAVLLSQEICKEGLENEDIRDELFLHTIKQLTANPSPKSRERGWQHLSLLLHTF-PPSGLDNFLDKWIMDNA-KERKAKLLHILYATLYTGKRYSPLSDDETKNVMDG 2758
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A7S2J1Q8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2J1Q8_9EUKA) HSP 1 Score: 85.1 bits (209), Expect = 5.820e-16 Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 1 Query: 94 EAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVR 357
+A QFK+LLG+ G++K YP+ + G L E+YVQ MKQLT NP+ AS D+ W++M L FPPPK LEN+V +F++
Sbjct: 18 QATVQFKSLLGFLGEKKVPYPEEAGEEWLRVGKATPALHAEMYVQLMKQLTANPSEASNDKGWQLMVATLSHFPPPKPLENFVAFFIK 105
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Match: A0A5A8CSV2_CAFRO (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CSV2_CAFRO) HSP 1 Score: 95.1 bits (235), Expect = 6.630e-16 Identity = 60/168 (35.71%), Postives = 89/168 (52.98%), Query Frame = 1 Query: 10 KAELAASYLLWTSDPIHKSLMDVSG--LKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELYVQAMKQLTKNPTPASQDRCWEVMTFLLHCFPPPKELENYVHYFVRCN------VPQETREKFKLAVHMSVYDGAKGTAPSVKEI------PPLLS 471
K L A+ L W S I++SL+++ L A + KN+LGYCGD++ +P L +DI KGL+ ELR E+Y+ +KQLT N S+ RCW+++ + FPP E E + F+ + V R + + SV GA PSV+EI PP+L+
Sbjct: 1570 KKRLMANQLTWQSTTINRSLLELPNKPLNKMATRLHKNILGYCGDKQMSFPAMLAQDILQKGLDEAELRDEIYLLVLKQLTGNTVKTSEMRCWQLICMCVGTFPPTHEFEYCLLNFLLSHRESMGTVGNYARYALR-RLEGSVTAGASAFVPSVEEILAYKDRPPILA 1736 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9614.17315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9614.17315.1 >prot_H-paniculata_contig9614.17315.1 ID=prot_H-paniculata_contig9614.17315.1|Name=mRNA_H-paniculata_contig9614.17315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp MDVSGLKGEAKKQFKNLLGYCGDRKYQYPDALIRDIAAKGLEMTELRGELback to top mRNA from alignment at H-paniculata_contig9614:3123..8587- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9614.17315.1 ID=mRNA_H-paniculata_contig9614.17315.1|Name=mRNA_H-paniculata_contig9614.17315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5465bp|location=Sequence derived from alignment at H-paniculata_contig9614:3123..8587- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9614:3123..8587- >mRNA_H-paniculata_contig9614.17315.1 ID=mRNA_H-paniculata_contig9614.17315.1|Name=mRNA_H-paniculata_contig9614.17315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig9614:3123..8587- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |