mRNA_H-paniculata_contig96.17304.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: D7FZS1_ECTSI (D-aminoacyl-tRNA deacylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS1_ECTSI) HSP 1 Score: 243 bits (620), Expect = 1.860e-77 Identity = 117/166 (70.48%), Postives = 136/166 (81.93%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQ-----------TVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSEM 734
MR V+QRVK ASV V+ + VSEIGKG++CL+GV +GD A+WLCKQI+ AKLFEGM E NADKRWRS+VKQNGF++LLVSQFTLNGRVC KGKVDFTGSMPPAEA +FY RFV MV+++HAP+LVK+GVFGAKMEVSLVNDGP+TV VDS EM
Sbjct: 1 MRVVVQRVKRASVAVEHKDGDGTSSEPSSVVSEIGKGILCLVGVKDGDEKGHAEWLCKQIVTAKLFEGMSEANADKRWRSNVKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPAEAREFYSRFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEM 166
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: A0A7J7MM04_9MAGN (D-aminoacyl-tRNA deacylase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MM04_9MAGN) HSP 1 Score: 157 bits (398), Expect = 3.590e-44 Identity = 79/164 (48.17%), Postives = 112/164 (68.29%), Query Frame = 3 Query: 246 RHILKRNRMRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSEMT 737
R +L+ MRAV+QRV +ASV V+E+TVSEIG GLV L+GVHE D A+++C+++L +LF E + W +V Q ++VLLVSQFTL G + K K DF +MPP A+ FY V+ S+ P+ VK+GVFGA M+V+LVN GP+T+ +DSS+++
Sbjct: 22 RGVLQIRNMRAVVQRVASASVEVEERTVSEIGPGLVVLVGVHESDAEADAEYICRKVLNMRLFNN---ETTGRAWDQNVMQRNYEVLLVSQFTLYG-IMKGNKPDFHVAMPPQTAKPFYASLVEKFRKSYTPEAVKDGVFGATMKVNLVNHGPVTMQLDSSQLS 181
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: A0A7S2V4R2_9STRA (D-aminoacyl-tRNA deacylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4R2_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.180e-42 Identity = 75/154 (48.70%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSE 731
M+ VIQRVK+ASV V++ +S IGKG +CL+G+HE DGP A W+ KQI++ KLF G K W+ ++ Q ++L+VSQFTL G+V K+GK+DF +M P A ++Y RF+ ++ V +G FG MEVSL+NDGPIT+T+DS E
Sbjct: 1 MKVVIQRVKSASVSVNDSQISCIGKGFLCLVGIHETDGPADADWMIKQIISCKLFPG----EDGKPWKRNISQIEGELLMVSQFTLYGKVYKRGKMDFHHAMSPDAAREYYSRFLDSLKEKTITGKVYDGAFGEIMEVSLLNDGPITITLDSFE 150
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: A0A6J1JZA6_CUCMA (D-aminoacyl-tRNA deacylase n=5 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JZA6_CUCMA) HSP 1 Score: 151 bits (381), Expect = 5.210e-42 Identity = 77/152 (50.66%), Postives = 105/152 (69.08%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDS 725
MRAV+QRV +ASV VD +TVSEIG GL+ LIGVH+ D A+++C+++L +LF E+ K W +V Q ++VLLVSQFTL G + K K DF +MPP A+ FY V+ S+ P +K+GVFGAKM+V+LVNDGP+T+ +DS
Sbjct: 1 MRAVVQRVASASVEVDGRTVSEIGPGLLVLIGVHDSDTDSDAEYICRKVLNMRLFPN---ESTSKAWDLNVMQKNYEVLLVSQFTLYG-ILKGNKPDFHVAMPPQTAKPFYSSVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDS 148
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: K3XMG8_SETIT (D-aminoacyl-tRNA deacylase n=11 Tax=PACMAD clade TaxID=147370 RepID=K3XMG8_SETIT) HSP 1 Score: 152 bits (383), Expect = 5.600e-42 Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSEM 734
MRAV+QRV +ASV V+ + VS IG GL+ L+GVHE D A ++C+++L +LF EN K W SV Q F+VLLVSQFTL G + K K DF +MPPA+A+ FY V+ + S++ VK+GVFGA M+VSLVNDGP+T+ VDS +
Sbjct: 1 MRAVVQRVLSASVEVEGRVVSAIGPGLLVLVGVHEADTDSDADYICRKVLNMRLFPN---ENTGKAWDQSVMQRNFEVLLVSQFTLYG-ILKGNKPDFHVAMPPAKAKPFYASLVEKFQRSYSADSVKDGVFGAMMKVSLVNDGPVTMQVDSPSL 151
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: V4MJH5_EUTSA (D-aminoacyl-tRNA deacylase n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MJH5_EUTSA) HSP 1 Score: 150 bits (379), Expect = 1.410e-41 Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSEMTT*ESGGSI 761
MRAVIQRV ++SV VD + VSEIG GL+ LIG+HE D A ++C+++L +LF E K W +V Q + VLLVSQFTL G + K K DF +MPP +A+ FY V+ + ++ P VK+GVFGA M+VSLVNDGP+T+ +DSS+ E+ S+
Sbjct: 1 MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTDSDADYICRKVLNMRLFSN---ETTGKGWDQNVMQRNYGVLLVSQFTLYGFL-KGNKPDFHVAMPPEKAKPFYASLVEKFQKAYNPDSVKDGVFGAMMKVSLVNDGPVTMQLDSSQSNKNETNASV 160
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: A0A2D4BDE5_PYTIN (D-aminoacyl-tRNA deacylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDE5_PYTIN) HSP 1 Score: 150 bits (378), Expect = 1.560e-41 Identity = 78/154 (50.65%), Postives = 104/154 (67.53%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSE 731
MR V+QRV ASV VD + V +IGKGLVCL+G+ D E A++ C+++L A+L+ + D W+SSV NG++VLLVSQFTL G + K DF +M PA A++FY F V A+H+ V GVFGA MEVSLVNDGP+T+T+DS +
Sbjct: 1 MRVVLQRVTGASVRVDGEVVGQIGKGLVCLVGITREDTEEDAEFCCRRLLNARLWP----DEKDTAWKSSVVSNGYEVLLVSQFTLYGYF-QGNKPDFHLAMAPAPAKEFYHAFCDRVRAAHSADKVAEGVFGAMMEVSLVNDGPVTMTIDSRD 149
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: A0A7S3CYW7_9EUKA (D-aminoacyl-tRNA deacylase n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYW7_9EUKA) HSP 1 Score: 149 bits (376), Expect = 2.750e-41 Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKG-KVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSS 728
MRAV+QRVKNASV+VD + +SEIGKGL L+G+ E D + A+ + ++IL + F + ++ K W SVK G +VLLVSQFTL G+ KG K+DF +M +AE+ + FVQ V+ HAP+LVK G FGA M+VSLVNDGP+T+ DS+
Sbjct: 1 MRAVVQRVKNASVVVDGEVISEIGKGLCVLVGIKEDDTKDDAEMIRRRILTTRFFP---DPDSGKMWAKSVKDLGLEVLLVSQFTLYGK--NKGTKIDFHRAMAGHKAEEEFEHFVQSVKNDHAPELVKEGKFGAMMDVSLVNDGPVTMEYDSA 149
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: A0A3B6GU17_WHEAT (D-aminoacyl-tRNA deacylase n=9 Tax=Triticeae TaxID=147389 RepID=A0A3B6GU17_WHEAT) HSP 1 Score: 150 bits (378), Expect = 3.130e-41 Identity = 78/155 (50.32%), Postives = 103/155 (66.45%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSEM 734
MRAV+QRV +ASV V+ Q VS IG GL+ L+GVHE D A ++C+++L +LF E K W SV Q F+VLLVSQFTL G + K K DF +MPPA+A+ FY V+ + S+ VK+G+FGA M+VSLVNDGP+T+ VDS +
Sbjct: 1 MRAVVQRVLSASVEVEGQVVSAIGPGLLVLVGVHEADTSSDADYICRKVLNMRLFTN---EKTGKAWDQSVMQRNFEVLLVSQFTLYG-ILKGNKPDFHVAMPPAKAKPFYASLVEKFQKSYKTDSVKDGIFGAMMKVSLVNDGPVTMQVDSPSL 151
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Match: UPI0009E1FE6C (D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E1FE6C) HSP 1 Score: 149 bits (377), Expect = 3.270e-41 Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 3 Query: 270 MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILAAKLFEGMGEENADKRWRSSVKQNGFDVLLVSQFTLNGRVCKKGKVDFTGSMPPAEAEDFYGRFVQMVEASHAPQLVKNGVFGAKMEVSLVNDGPITVTVDSSEMTT*ESGGSIS-RTA 773
MRA++QRV +A V V+ + VSEIG GL+ L+G+HE DG A ++C+++L +LF E + K W SV Q F VLLVSQFTL G + K K DF +MPP +A++FY V+ S+ +VK+G+FGA M+V+LVNDGP+T+ +DSS+ T S G+I RTA
Sbjct: 1 MRAIVQRVLSAGVEVEGRLVSEIGPGLLVLVGIHESDGEADADYICRKVLNMRLFPN---EKSGKAWDQSVMQRNFGVLLVSQFTLYG-ILKGNKPDFHVAMPPNKAKEFYASLVEKFRKSYTADVVKDGIFGAMMKVNLVNDGPVTMQLDSSQ--TRNSNGAIEDRTA 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig96.17304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig96.17304.1 >prot_H-paniculata_contig96.17304.1 ID=prot_H-paniculata_contig96.17304.1|Name=mRNA_H-paniculata_contig96.17304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp MRAVIQRVKNASVIVDEQTVSEIGKGLVCLIGVHEGDGPEQAQWLCKQILback to top mRNA from alignment at H-paniculata_contig96:48768..53077- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig96.17304.1 ID=mRNA_H-paniculata_contig96.17304.1|Name=mRNA_H-paniculata_contig96.17304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4310bp|location=Sequence derived from alignment at H-paniculata_contig96:48768..53077- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig96:48768..53077- >mRNA_H-paniculata_contig96.17304.1 ID=mRNA_H-paniculata_contig96.17304.1|Name=mRNA_H-paniculata_contig96.17304.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig96:48768..53077- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |