mRNA_H-paniculata_contig9572.17282.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI) HSP 1 Score: 773 bits (1995), Expect = 5.200e-279 Identity = 373/441 (84.58%), Postives = 402/441 (91.16%), Query Frame = 1 Query: 1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKV 1323 + ISMY EAPFEEITLDEFEL+ALDRLQVLRKIEDLKARNVRGDD++R+LRESLHKYMK+STL+++SA AD RKD ISHFILRLAYCRSEDLRRWFLTQETALFR+RLEELSP M KFI +H L FEVV PERKAA+ RSKL S+ ++ D+TTYY+IPFWQA DL+G RQVYLE GFAYVPVQRVVTIVVAR+RMGIS+SL+EASNHFA+VTSDSRFGPLLQNMSKQYLGRDFGN DG D D I PGMLN+LAERSMPLCM+QLH+ LNREHKLKHWGRLQYGLFLKGAGL VDDAMAFWQ FTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPP AGDHHGCPYRHYDEDHLSSLLSQVRI DKDA+LRQVKSKNYQLACQRHFEATHKG+E +G+STDGVGNHPNAWMHASMEFHK K Sbjct: 25 KAISMYNEAPFEEITLDEFELVALDRLQVLRKIEDLKARNVRGDDFRRALRESLHKYMKLSTLNEESASADKRKDTISHFILRLAYCRSEDLRRWFLTQETALFRHRLEELSPAEMSKFIPEHGLFFEVVTPERKAAL-RSKLLSIPAAPVMEFDRTTYYRIPFWQASDLIGKRQVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQNMSKQYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEKA 464
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA) HSP 1 Score: 583 bits (1504), Expect = 1.230e-204 Identity = 286/442 (64.71%), Postives = 345/442 (78.05%), Query Frame = 1 Query: 1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKVG 1326 ++ISMYT P EE+TLDEFEL ALDRL VLRK+EDLKAR +G ++ L ++++ +MKI++LS++ A +RKD +SHFILRLAYCR+EDLRRWFLTQE+ALFRYRLE LS G+ FI + L+FEVV + KAA RS+L + G ++ T+Y+IPF QA DL+G R VYLE G+AYVPVQRVV IVVARFR +SRSL EAS F VT D RFGPLLQNMS+QY+GRDFG D I P L+ +A RSMPLCMR LH L R+HKLKH GRLQYGLFLKGAGL ++DA AFWQ++FT++M +D F K YAYNVRHMYGKEGKRTNYTPYSCLKIIMG PGAG+HHGCPYRH+DE HLS+L Q+++ AD+DA+ VK +NYQLACQRHFEATH+G+E AG+S DGVGNHPNAW ASM++ KAK G Sbjct: 23 EIISMYTTPPSEELTLDEFELFALDRLTVLRKLEDLKARGYKGREFTEHLEKAVNTHMKINSLSENVEEA-IRKDTVSHFILRLAYCRTEDLRRWFLTQESALFRYRLESLSSTGIISFIQSNGLAFEVVSADDKAA-RRSRLLTAPGATAAEFERCTFYRIPFAQATDLIGQRLVYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQNMSRQYVGRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKGYAYNVRHMYGKEGKRTNYTPYSCLKIIMGAAPGAGEHHGCPYRHFDESHLSALFGQLKLERADRDAMAAHVKGRNYQLACQRHFEATHRGYEDAGVSADGVGNHPNAWTAASMQYWKAKEG 462
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA) HSP 1 Score: 468 bits (1205), Expect = 4.220e-159 Identity = 233/452 (51.55%), Postives = 319/452 (70.58%), Query Frame = 1 Query: 1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSV----------HGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGISTDGVGNHPNAWMHASMEFHKAKVG 1326 +++S+Y AP EITL+EFEL ALDRLQ+LR IE L+ R ++GD+++ L E + M ++ + + ++RKD+ISHFILR+AYC++EDLRRWFL E+ LFR+RLE L KF+ Q L+++VV E + +++LQ+V G + V +T +++IPF QA+DLV RQV+LE GFAYVPV+R+V+I+VARFR +SR L+EA +V +D R PL+ NM+KQY G+DF D+ + L+ LA+RSMP+CMR LH L EHKLKHWGRLQYGLFLKGAG+G++DA+ FW+ +FTKIM D F KQYAY++RH +GKEGKR +YTP++C KII+G PG G+ HGCP+RHYDE +L+ LL + + D+D +++ K ++YQLAC +HFE THKG E+ IS DGVGNHPNA+ ASM F+K K G Sbjct: 23 RLLSLYNTAPQAEITLEEFELYALDRLQILRSIESLRLRGMKGDEFRMKLEEIISACMPMTLGTAE----EVRKDQISHFILRIAYCKTEDLRRWFLKHESELFRFRLERLDSNERAKFMEQSGLAYDVVSKEDVLRL-KAQLQAVPIFSQQPGYGQGIHTVEVTRTQFFRIPFTQALDLVAHRQVFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLND--LDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESL-ISMDGVGNHPNAFFAASMAFYKEKNG 466
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S3H234_9STRA (DNA primase large subunit n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H234_9STRA) HSP 1 Score: 462 bits (1190), Expect = 5.830e-157 Identity = 227/446 (50.90%), Postives = 310/446 (69.51%), Query Frame = 1 Query: 1 QVISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSD---DSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGH-ETAGISTDGVGNHPNAWMHASMEFHKAKVG 1326 +++S+Y E P +E+TLDEFE+++LDRLQ+LR I+ LK + G + + + L++ K LS+ ++ +D++SHFILRLAYCR+E+LRRWFL QE +L +YRL+ LS + F+ + + F+ V E K + + KL + G +++ KTT+YK+PF QA+ LV +R VYLE GFAYVP+QR+V+I+V RFRM +SR+L EA+N F V SD R GPLL+NM+KQ++G DF + + DK++P + AE +MPLCM+ LH+ L REHKLKHWGRLQYGLFLKGAGL ++ A FW++ FTK++ DQF K YAY+ RHMYGKEG R NYTPYSC+KIIMG PP G HGCPYRH ++ LSSLLS ++++ D + KS NYQ+ACQRHF+ TH GH + +D V NHPN W S+ +HK K G Sbjct: 22 RLLSLYAEPPQQELTLDEFEVVSLDRLQLLRSIDVLKTKG--GTEGEHAFNHQLYELEKKYLLSNREFSHRMNEVERDQVSHFILRLAYCRTEELRRWFLGQECSLMKYRLDSLSDEERASFMLSNGMDFDPVSNEEKNS-RKDKLIDLAGVTSVSIIKTTFYKVPFQQALSLVSSRSVYLEKGFAYVPLQRLVSIIVTRFRMQLSRALAEAANSFDIVGSDHRIGPLLKNMNKQFIGNDFTKTNQS-IDKLSPDKIELAAEVNMPLCMKNLHSNLKREHKLKHWGRLQYGLFLKGAGLDLEGAQQFWESHFTKLISHDQFVKSYAYSFRHMYGKEGARKNYTPYSCMKIIMGTPPETGAFHGCPYRHMPDNQLSSLLSSLKLSTPDVSEIAALAKSSNYQIACQRHFDVTHPGHLNNPELKSDAVANHPNLWFQTSVNYHKLKNG 463
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S4A6J1_9STRA (DNA primase large subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J1_9STRA) HSP 1 Score: 445 bits (1144), Expect = 3.690e-150 Identity = 220/441 (49.89%), Postives = 301/441 (68.25%), Query Frame = 1 Query: 7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVV-DPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYLGRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAG----ISTDGVGNHPNAWMHASMEFHK 1314 +S+Y + P EE+TL+EFE+ A+DRL+VLR I+ L+ + + + + L + + + +++ + A +D RKD +SHFILRLAY RSE+LRRWFLTQE ALFR+RL L G +F+ +H L FE V D ER A ++ L + + TYY++PF +A+DL+G R+VYLE G+AYVP ++ +IVV+RFR +SRSL +AS A +D R GPLL N+ K L R + D D + ITP ++ LA++SMPLCM+QLH L R+HKLKHWGR QYGLFLK AGL ++D + F+Q +FTKIM DQF K+YAYN+RH YGKEGKRT Y+PY C K++M PG G++HGCPYRH+D DHL+++LS+ + ++ VL + K +NYQ+ACQRHFE HK G + DGVGNHPNAW AS +H+ Sbjct: 22 VSLYEKPPREEMTLEEFEVFAVDRLKVLRTIDALRQKGFKPKELEAELAPVVRELLPLAS-AGPQAPSDARKDSVSHFILRLAYSRSEELRRWFLTQECALFRHRLSRLRGDGFARFLREHGLRFEEVPDSERDARVT--SLARIKNYENVPAQTATYYRVPFLEAIDLIGRREVYLEKGYAYVPQAKLHSIVVSRFRASLSRSLAKASGSLAAAAADPRLGPLLTNVEKHDLERQ--DVDDDDIEGITPEQIDALADQSMPLCMQQLHYALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTHDQFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLVMDMAPGPGEYHGCPYRHFDADHLAAVLSKTSLDAGEQSLVLGKAKERNYQIACQRHFEFAHKKQTVNGKKVVANLDGVGNHPNAWFKASRVYHQ 457
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: F0YER9_AURAN (DNA primase large subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER9_AURAN) HSP 1 Score: 434 bits (1116), Expect = 4.550e-146 Identity = 223/453 (49.23%), Postives = 302/453 (66.67%), Query Frame = 1 Query: 4 VISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQGMGKFISQHDLSFEVVDPE----RKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDSRFGPLLQNMSKQYL--GRDFGNADGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGADKDAVLRQVKSKNYQLACQRHFEATHKGHETAGIST--DGVGNHPNAWMHASMEFHKAKVGSRTP 1338 ++S+Y P E+TLDEFE+ A+DRL++LR I+ LK + + + + L L + + + S + +AD RKD++SHFILRL Y R+E++RRWFLTQE ALF++RL LS +G F++ + L FE V R A+S+ G A YY++PF +A+DL+G R+VYLE G+AYVP ++ IVVARFR +SRSL +AS+ A D R PLL N+ K L G+D + D + I P ++ LA++SMPLCM+QLH L R+HKLKHWGR QYGLFLK AGL ++D + F+Q +FTKIM +D F K+YAYN+RH YGKEGKRT Y+PY C K+IM PG G++HGCPY+HYD+DHL+S+L + I+ A+L Q KSKNYQLACQ+HFE TH + AG++ DGVGNHPNAW AS +HK ++ P Sbjct: 23 LVSLYERPPQTELTLDEFEIYAVDRLKILRTIDALKQKGFKPRELEAELAPVLAQALPLRG-SAEHVKADERKDQVSHFILRLGYSRTEEMRRWFLTQECALFKHRLGTLSGPQLGLFLAANGLKFEEVSDADVDARSVALSKISKTGDGGAA-------GYYRVPFVEAIDLIGRREVYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAAGDPRLSPLLNNIEKHDLSNGKDL---EDDDVEGIHPEQIDALAKQSMPLCMQQLHGALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKSKNYQLACQKHFEVTHP--KAAGVAARPDGVGNHPNAWFKASRIYHKEVHEAKNP 462
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S1ZF14_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF14_9STRA) HSP 1 Score: 424 bits (1089), Expect = 1.200e-141 Identity = 217/459 (47.28%), Postives = 313/459 (68.19%), Query Frame = 1 Query: 7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLS-------------DDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEEL--SPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALL--NVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDS-RFGPLLQNMSKQYLGRDFGNADGA-DADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAGA-DKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHASMEFHKAK 1320 + Y E P E++LDEFE AL RL+VLRKIE+L+A+N+ G +++ +L +L + + L+ + ++ + + D SHFILR AYCR+EDLRRWFLTQE ALFR+RL+++ S F+ + DL F+ V K + R L S+ + + + + +Y++PF QA+DLV R Y+ G AYVP R+V+I+VA++RM +S+SL+ A+ F VT ++ R PLL++M+ QYLGRD+G D + D++T +++ A++SMPLCM QLH + R+ KLKH GRLQYGLFLKG G+ ++ +AF+Q FTKIM +QF K Y+YN+RHM+G+EGKR +Y+PYSC+KII+GNPP G+ HGCP+RHYD+ LSSLL+++ + A D+ A+L Q K++NYQLAC +HFE H G + G+S +GVGNHPNAW AS+ +HKAK Sbjct: 36 LDFYAEIPSYELSLDEFEEFALARLKVLRKIEELRAQNITGAEFRTNLESTLKENLTTQNLTASKSFGTIAKPSAKEQSKLNNKIDTASHFILRAAYCRTEDLRRWFLTQECALFRFRLDKILTSSSAFRAFLVKADLHFDRVSDLEKERL-REFLLSIPNSNVSPGELSVSVFYQVPFVQALDLVAKRLCYVHDGMAYVPQSRMVSIIVAKYRMALSKSLVRAALSFGEVTEENERIAPLLKSMNSQYLGRDYGKEDTPLENDELTANTVDSYAKQSMPLCMSQLHAGMKRDSKLKHQGRLQYGLFLKGGGMSTEEHLAFFQRVFTKIMTTEQFNKNYSYNIRHMHGQEGKRASYSPYSCMKIILGNPPQGGESHGCPFRHYDDSSLSSLLTKLNVGSASDRSAILAQKKARNYQLACAKHFEVMHPGAASVEGLSMNGVGNHPNAWFAASVGYHKAK 493
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S2UM83_9STRA (DNA primase large subunit n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM83_9STRA) HSP 1 Score: 419 bits (1076), Expect = 9.410e-140 Identity = 217/453 (47.90%), Postives = 300/453 (66.23%), Query Frame = 1 Query: 10 SMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRK-DKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEEL----SPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSDS-RFGPLLQNMSKQYLGRD-FGNADG-ADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAGDHHGCPYRHYDEDHLSSLLSQVRIAG-ADKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHASMEFHKAKVGSRTP 1338 + Y E P E++LDEFE AL RL+VLRKIE+LK RN+ GD + L E+L + ++ ++ +K D SHFILR AYC SEDLRRWF QET LF+YR E L S + +F + ++ + V K + R L S T Y+ +PF QA+DLV RQ Y+EAG AYVP+ ++V+IV +F +S+SL A F+ VT+++ R PLL++M QY ++ + +G +D ++T ++T A +SMPLCM QLH+ L ++HKLKHWGRLQYGLFLKGAG+ +++++ F+Q +F KI+ +QF K Y+YN+RHMYGKEGKR +YTPY+C KII+GNPP +GDHHGCPYRHYD+ HLSSLL+++ I AD+DA++ K++N QLAC RHFEA H + G++ D VGNHPNAW S+ +H AK + P Sbjct: 36 NFYNEVPSAELSLDEFEEAALARLKVLRKIEELKVRNITGDSFHTMLMETLKANLLVADTTNKKKEEQSKKLDVNSHFILRAAYCHSEDLRRWFKAQETFLFKYRFENLMKDPSRTRLRQFFRESNIDLDRVSASEKERL-RPMLLSCSDITPTLFPTTPYFAVPFTQALDLVAKRQCYVEAGLAYVPLPKIVSIVTNKFTTALSKSLTNAGYAFSKVTNENGRINPLLKSMHSQYADKNRYTTGEGMSDGQELTSQNVDTYAAQSMPLCMSQLHSGLQQDHKLKHWGRLQYGLFLKGAGMTMEESLMFFQREFGKIITAEQFNKNYSYNIRHMYGKEGKRASYTPYNCTKIILGNPPQSGDHHGCPYRHYDDTHLSSLLTKMNIGTPADRDAIMSHKKAQNPQLACVRHFEAVHPAATSVKGVTLDNVGNHPNAWFAGSVSYHAAKSDNVKP 487
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: A0A7S2LEW2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LEW2_9STRA) HSP 1 Score: 417 bits (1072), Expect = 9.890e-139 Identity = 220/457 (48.14%), Postives = 309/457 (67.61%), Query Frame = 1 Query: 7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEELSPQ------GMGKFISQHDLSFEVVDPERKAAISRSKLQSVHG--TALLNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSD--SRFGPLLQNMSKQYLGRDFGNA----DGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAG-DHHGCPYRHYDEDHLSSLLSQVRIAG-ADKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHASMEFHKAKVG 1326 + MY + P E++LDEFE AL RL+VLRKIE++K RN+ + ++ L S+ + L+ + + D SHFILR AYCR+EDLRRWFL QE LFR+RLE LS G+ +F++ +D + V E K +S KLQ V G T+ T YY++PF QA++LV R+ Y+E G AYVP+ R+V+IV A+FR+ +S+SL A+ F V D SR GPLL++M+ QY G NA DG +A +T ++ LA++SMPLCM+QLH L R+HKLKH GRLQ+GLFLKGAG+ +++ F+Q +FT+IM +QF K Y+Y++RHM+GKEGKR +YTPY+C+KII GNPP +G +HHGCPY+H+D+ +LS+LL++++I AD+D ++ K N+QLAC +HFE +H + G++ DGVGNHPNAW AS+ +H AK G Sbjct: 65 VDMYLDVPSFELSLDEFEEYALARLKVLRKIEEMKTRNLPPETFRTQLDASIK-----ANLTSTQQKHKTKLDVASHFILRAAYCRTEDLRRWFLAQECRLFRHRLENLSRSSSTNNSGLREFLANNDFDLDPVSREEKERLS-DKLQKVPGGPTSPGEFINTQYYRVPFVQALELVSRRECYVEKGQAYVPLARIVSIVAAKFRVALSKSLALAAGVFGQVAHDEASRIGPLLKSMNSQYTGPGAPNAVMGTDGENA--LTAATVDALADQSMPLCMQQLHQGLKRDHKLKHQGRLQFGLFLKGAGMSLEEHTLFFQREFTRIMTSEQFNKSYSYSIRHMHGKEGKRASYTPYNCMKIIFGNPPQSGVEHHGCPYKHFDDQNLSALLTKLKIGSVADRDVIMSHKKDGNFQLACAKHFEVSHPSATSVDGVNLDGVGNHPNAWFSASVSYHNAKNG 513
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Match: B8CCN9_THAPS (DNA primase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCN9_THAPS) HSP 1 Score: 413 bits (1061), Expect = 1.920e-138 Identity = 220/442 (49.77%), Postives = 300/442 (67.87%), Query Frame = 1 Query: 7 ISMYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLHKYMKISTLSDDSARADMRKDKISHFILRLAYCRSEDLRRWFLTQETALFRYRLEEL---SPQGMGKFISQHDLSFEVVDPERKAAISRSKLQSVHGTAL-LNVDKTTYYKIPFWQAVDLVGTRQVYLEAGFAYVPVQRVVTIVVARFRMGISRSLIEASNHFAFVTSD--SRFGPLLQNMSKQYLGRDFGNA--DGADADKITPGMLNTLAERSMPLCMRQLHTVLNREHKLKHWGRLQYGLFLKGAGLGVDDAMAFWQTQFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPGAG-DHHGCPYRHYDEDHLSSLLSQVRIAG-ADKDAVLRQVKSKNYQLACQRHFEATHKGHETA-GISTDGVGNHPNAWMHAS 1299 + MY E P E++LDEFE AL RL+VLRKIE++K RN+ D + L S+ + L+ S + D+ SHFILR AYCR+EDLRRWFL QE LFR+RL+ S G+ F+++++ + V K + R KL SV G+ L + T YY++PF QA++LV R+ ++E GFAYVP+ R+V+IV A+FR +S+SL A+ F V +D SR GPLL++M+ QY G NA D + + +T ++ LA +SMPLCM+QLH L R+HKLKH GRLQYGLFLKGAG+ +++ M F+Q +FTKIM +QF K YAYN+RH +GKEGKR YTPY+C+KII GNPP G +HHGCPY+HYD+ +LS+LL++++I G +D+DA++ K N+QLAC +HFE H + GI+ DGVGNHPNAW AS Sbjct: 5 VDMYLETPAFELSLDEFEEYALARLKVLRKIEEMKTRNLPPDQFTSQLSASIK-----TNLNSTSKKVDIA----SHFILRAAYCRTEDLRRWFLAQECRLFRHRLDNCAKRSSDGLRDFLARNEFDLDRVQGREKERL-RDKLLSVPGSPNPLEFNATEYYRVPFVQALELVSKRECFVEKGFAYVPLGRIVSIVAAKFRATLSKSLALAAGVFGQVANDESSRIGPLLKSMNSQYTGPGAPNAVMDASGENALTAATVDALAAQSMPLCMQQLHVGLKRDHKLKHQGRLQYGLFLKGAGMPMEEHMLFFQREFTKIMTSEQFNKNYAYNIRHTHGKEGKRATYTPYNCMKIIFGNPPQTGVEHHGCPYKHYDDQNLSALLTKLKIGGLSDRDAIMAHKKEGNFQLACTKHFEVMHPAATSVEGINLDGVGNHPNAWFSAS 436 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9572.17282.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9572.17282.1 >prot_H-paniculata_contig9572.17282.1 ID=prot_H-paniculata_contig9572.17282.1|Name=mRNA_H-paniculata_contig9572.17282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=443bp MYTEAPFEEITLDEFELMALDRLQVLRKIEDLKARNVRGDDYKRSLRESLback to top mRNA from alignment at H-paniculata_contig9572:399..9392- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9572.17282.1 ID=mRNA_H-paniculata_contig9572.17282.1|Name=mRNA_H-paniculata_contig9572.17282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8994bp|location=Sequence derived from alignment at H-paniculata_contig9572:399..9392- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9572:399..9392- >mRNA_H-paniculata_contig9572.17282.1 ID=mRNA_H-paniculata_contig9572.17282.1|Name=mRNA_H-paniculata_contig9572.17282.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2658bp|location=Sequence derived from alignment at H-paniculata_contig9572:399..9392- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |