mRNA_H-paniculata_contig9568.17280.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A6H5KFS2_9PHAE (DNA topoisomerase 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFS2_9PHAE) HSP 1 Score: 803 bits (2073), Expect = 1.900e-273 Identity = 399/496 (80.44%), Postives = 437/496 (88.10%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAK---AKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 P++ + GR+ELSFYTVPEY WK+ + NGKGW+AKYYKGLGTST+KEAKEYFAALDTHQLEFEW+ D +D DLIDMAFSKKRVEDRK+WLR FKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNL+KEIKVVQLAGYVSEHSAYHHGEASLNGTI AMAQN+TGSNNLNLL PGGQFGTRLMGGKDAASPRYIF+ LEK ARA+FHPDDDALL YLDDDGLSIEPEFY+P++PLILVNGSDGIGTGWSS VPNYSP DVIENL+RRIKG FVEMQPWY GFAGSI AK KKG +G Y+ GIVNR+DDTTVEI ELPVR WTQ+YKQFLESLLPGAEDAK AKG KS +R I+DFKENHTDTTVHFTVTM EDLDA++KG+GLYKFFKLESSV+T+NMVLFDQDG L +Y++PQHIMEEF TLR ++Y RRK SL+ K+Q+EWSKLDNKV Sbjct: 516 PIVKVSKGRNELSFYTVPEYTVWKEGHANGKGWNAKYYKGLGTSTAKEAKEYFAALDTHQLEFEWQDDHRDDDLIDMAFSKKRVEDRKEWLRGFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLRKEIKVVQLAGYVSEHSAYHHGEASLNGTITAMAQNFTGSNNLNLLTPGGQFGTRLMGGKDAASPRYIFTALEKAARAVFHPDDDALLTYLDDDGLSIEPEFYMPIIPLILVNGSDGIGTGWSSNVPNYSPHDVIENLKRRIKGDQFVEMQPWYKGFAGSIEAKVGKKGFEGSYTVRGIVNRVDDTTVEITELPVRKWTQDYKQFLESLLPGAEDAKSKDAKGNXXXXXXXXXXXXXXKSPTRCIKDFKENHTDTTVHFTVTMSMEDLDALDKGDGLYKFFKLESSVSTNNMVLFDQDGHLERYESPQHIMEEFITLRSEFYDRRKTSLLNKLQSEWSKLDNKV 1011
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A835YRC0_9STRA (DNA topoisomerase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC0_9STRA) HSP 1 Score: 620 bits (1598), Expect = 1.280e-209 Identity = 311/485 (64.12%), Postives = 372/485 (76.70%), Query Frame = 1 Query: 31 ELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGG-YSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEG-LYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 ELSF+TVPEY W+ + +GWS KYYKGLGTST+KEAKEYFA LD HQ+ FEW+ D D D++D+ F+KKR EDRK+WLR F GT DY V+++TY++F N+ELILFS+EDNKRS+PC+VDG KPSQRKVLF+CFKR LK EIKV QLAGYVSEHSAYHHGE SL GTI AMAQ+Y GSNN+ LL PGGQFGTRLMGGKD ASPRYIF+RL+KVARA+FHPDDDA+L YLDDDG+SIEP +YVPV+PL+LVNG++GIGTGWSS VPNYSPRDV+ENLRRRI+GQ VEMQPWY GF G+I K G G ++ GIV R D T+EI ELPV+ WTQ+YK FLES P KA AK +I+DF+ENHTDTTVHFT+TM DLDAIE+ G L KFFKLE+++ +NM LFD G + +Y++P IMEEF+ LR+ +Y RK L+ +MQ EW +LDNKV Sbjct: 521 ELSFFTVPEYETWRAAHAQQRGWSIKYYKGLGTSTAKEAKEYFAKLDQHQIPFEWRDDAADGDMVDLVFNKKRAEDRKEWLRNFVPGTFVDYGVDAMTYDAFFNRELILFSIEDNKRSLPCMVDGLKPSQRKVLFACFKRKLKNEIKVAQLAGYVSEHSAYHHGEVSLTGTITAMAQSYCGSNNVALLYPGGQFGTRLMGGKDQASPRYIFTRLDKVARAIFHPDDDAILTYLDDDGMSIEPAYYVPVLPLVLVNGAEGIGTGWSSGVPNYSPRDVMENLRRRIRGQPMVEMQPWYRGFVGTIARKAG--GAKGSSFTVEGIVERTGDETLEITELPVKKWTQDYKAFLES------------PTKAAAK----------PRFHIKDFRENHTDTTVHFTITMDKSDLDAIEQQPGGLSKFFKLETTLAETNMTLFDNTGMIARYESPLQIMEEFYDLRLRHYGMRKEHLLARMQKEWMRLDNKV 981
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A7S3XNX1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNX1_HETAK) HSP 1 Score: 574 bits (1479), Expect = 1.230e-196 Identity = 297/497 (59.76%), Postives = 364/497 (73.24%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSIT--AKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAI--EKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 P++ G+ +F+T+PEY WK+ N+GKGW+ KYYKGLGTS+SKEAKEYF+ L+TH+L+FEW+ + D DLIDMAFSKKRV DRK WL+ F+ GT +Y +++TYE+FINKEL+LFS+ DN RSIP ++DGFKPSQRKVLF+CFKR LK EIKV QLAGYVSEH+AYHHGEASLN TI+ MAQN+ GSNN+NLL P GQFGTRLMGGKDAASPRYIF+RLE VAR +FHPDDD LL +LDDDG SIEP+ Y+PV+P++LVNG+DGIGTGWSS VP Y PRDVI NLRR +K + M PW++GFAG + AKT G Y GI+ +DD+T+ I ELPVR WTQ+YK FLESLLPG A A G I+ FKENHTDTTV FTV + L+ + E G GL K FK+E SV+TSNM LF+++G + Y TP+ IME F+ R+ Y RK L+ K+ E+ KLDNKV Sbjct: 107 PIVKCTKGKRTETFFTIPEYQRWKEATNDGKGWTIKYYKGLGTSSSKEAKEYFSDLNTHRLDFEWQDEAIDGDLIDMAFSKKRVNDRKTWLKEFEQGTSINYGSDAMTYENFINKELVLFSLADNMRSIPHVMDGFKPSQRKVLFACFKRKLKAEIKVAQLAGYVSEHAAYHHGEASLNSTIVGMAQNFVGSNNVNLLFPSGQFGTRLMGGKDAASPRYIFTRLEAVARLIFHPDDDPLLNFLDDDGQSIEPDHYLPVLPMVLVNGADGIGTGWSSSVPTYDPRDVIANLRRLVKCEAMEPMHPWFNGFAGELVPNAKTP-----GSYKVKGILEVVDDSTILISELPVRKWTQDYKVFLESLLPGGTGAGADG--------------------IIKGFKENHTDTTVAFTVNLDPTVLNRLRLEPG-GLEKKFKIEGSVSTSNMTLFNKEGMIETYATPEAIMEVFYEARIQGYEDRKNYLVDKLNKEFRKLDNKV 577
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A7S3XY17_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY17_HETAK) HSP 1 Score: 561 bits (1447), Expect = 3.140e-193 Identity = 285/494 (57.69%), Postives = 362/494 (73.28%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEG-LYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 P++ G+ E FYT+PEY WK N++G+GW+ KYYKGLGTS +KEA++YF+ L+TH+LEFEWK +E D + I++AF+KKRV+DRK+WL ++ G+ DY VE+V +++FI KEL+LFS+ DN RSIP +VDGFKPSQRKVLF+CFKR L +EIKV QLAGY+SEHSAYHHGE SL GTII MAQN+ GSNN+NLL P GQFGTR+MGGKD+ASPRY+F+RLEK+ARA+FH DDD LL YLDDDG SIEPE+YVPV+P++LVNGSDGIGTGWSS VP Y+PRD+IENL+RRI G+ ++PWY GF G K +K G Y +G ++D T+ I ELPVR WTQNYKQFLE L EK+ + DF ENHTDTTV FTVT L+ E G L+KFFKLES+V SNM LF+++ ++ KYD+ +ME FF LR+++Y RRKA ++ M+ ++ LDNKV Sbjct: 39 PIVKCRKGKREKIFYTLPEYEQWKRENDDGRGWNIKYYKGLGTSNAKEARDYFSDLNTHRLEFEWKGEE-DGEAIELAFAKKRVDDRKEWLLEYEKGSVMDYTVETVPFDTFIRKELVLFSLADNVRSIPGVVDGFKPSQRKVLFACFKRGLTQEIKVAQLAGYISEHSAYHHGEMSLTGTIIGMAQNFVGSNNINLLFPSGQFGTRIMGGKDSASPRYVFTRLEKIARAIFHKDDDPLLTYLDDDGKSIEPEYYVPVLPMVLVNGSDGIGTGWSSSVPCYNPRDIIENLKRRINGEPMKPLKPWYRGFNG----KVAKGKGPGKYVTVGTAKVLNDKTIHITELPVRVWTQNYKQFLEDKL----------------------RTEKNPQGTVLDFIENHTDTTVDFTVTFTDGALEDAENAPGGLHKFFKLESAVGCSNMHLFNEESKILKYDSVLDVMEAFFHLRLEFYRRRKAHMLASMELDFRVLDNKV 505
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: W7TC60_9STRA (DNA topoisomerase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC60_9STRA) HSP 1 Score: 583 bits (1504), Expect = 3.320e-191 Identity = 284/489 (58.08%), Postives = 372/489 (76.07%), Query Frame = 1 Query: 16 GSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTM-HTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 GS R++ +FYT+PEY WK+ N GW+ KYYKGLGTST++EAKEYF+ L TH+++F W +D+ D D+IDMAF+KKRVEDRK+WLR F GT+ DY VES++Y++F+N+ELILFSM DN+RSIP L+DG KP+QRKVLF+CFKRNLKKEIKV QLAGYVSEHSAYHHGEASLNGTI+ MAQN+ GSNN+ L P GQFGTR+MGGKDAASPRY+F+RLE+V RA+FHP+DD LL ++DG IEPE+Y PV+P +LVNG +GIGTGWSS VPNY+PRD++ N+RR ++G+ EM PWY GF G++ AK ++ G Y+ +G V R+DD TVE+ ELPV+ WTQ+YKQFLES+ GA D K GA +I+D KE HTDT+V+F +T+ T + + + L+K KLESS+TTSNM LFD +G + KY+TP ++ EF+ LR+ Y +R+A+L+ +++ EW ++DNKV Sbjct: 594 GSKRAD-AFYTIPEYEQWKERTNEAAGWTIKYYKGLGTSTAQEAKEYFSDLSTHRIDFCW-ADDGDGDVIDMAFAKKRVEDRKEWLRGFSKGTYVDYKVESMSYDTFVNQELILFSMADNQRSIPHLMDGLKPAQRKVLFACFKRNLKKEIKVAQLAGYVSEHSAYHHGEASLNGTIVGMAQNFVGSNNIGFLYPSGQFGTRIMGGKDAASPRYVFTRLEEVTRALFHPEDDQLLPLQEEDGQVIEPEYYAPVIPTVLVNGGEGIGTGWSSTVPNYNPRDIMANIRRLLRGEEPEEMHPWYRGFTGTVEAKGGREA--GSYAVLGTVRRVDDVTVEVTELPVKKWTQDYKQFLESMTVGASDEK-------GA--------------FIKDLKERHTDTSVYFVITLSETAAPELLVDDQALFKRLKLESSITTSNMHLFDAEGHIVKYETPLAVLREFYPLRLSLYEKRRAALLQRLEREWRRMDNKV 1057
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A1V9Z4P5_9STRA (DNA topoisomerase 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4P5_9STRA) HSP 1 Score: 562 bits (1449), Expect = 9.430e-184 Identity = 284/494 (57.49%), Postives = 366/494 (74.09%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEG-LYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 P++ G LSFYT+PEY W+++ NNG+GW KYYKGLGTST+KEAKEYF+ L+ HQ+ F+++ D D I+MAFSKKR+EDRK+WLRAF GTH DY+V+++ Y F+NKELILFSM DN RSIP +VDGFKPSQRKVLFSCFKRNLKKEIKV QLAGYVSEHSAYHHGEASL+GTII MAQ++ GSNNL+LL+P GQFGTRL GGKDAAS RY+F++LE + R +FHP DD++L+YL+++GLSIEPE+Y+PV+PL LVNGSDGIGTGWSS +PNY+P D+I+N+R+RIK + MQPWY GF GSI +KG + G+ +D++T+ I ELPV+TWTQ+YK+ LE +L + I+DF+ENHTDTTV FT+TM L A++ G + K FKLE+S++TSNM LFD GQ+ Y +P I++EF+TLR+DYY RRK +++ ++ E L NK+ Sbjct: 574 PIIKATKGGRVLSFYTMPEYENWRNSTNNGRGWDIKYYKGLGTSTAKEAKEYFSDLNKHQIAFKYEGPV-DDDAIEMAFSKKRIEDRKEWLRAFVPGTHIDYDVQNMGYADFVNKELILFSMADNIRSIPSVVDGFKPSQRKVLFSCFKRNLKKEIKVAQLAGYVSEHSAYHHGEASLHGTIINMAQDFVGSNNLHLLSPNGQFGTRLKGGKDAASARYVFTKLETLTRMVFHPLDDSVLSYLEEEGLSIEPEWYMPVIPLALVNGSDGIGTGWSSSIPNYNPVDIIKNIRQRIKAEPMEAMQPWYRGFKGSIV----QKGSGDNFLVQGLFEVVDESTLVISELPVKTWTQSYKKILEKML---------------------------ETNKIKDFRENHTDTTVLFTITMEPAALAAVQNEVGGILKEFKLETSISTSNMHLFDAAGQIKHYRSPLEIIDEFYTLRIDYYGRRKVAILKRLDTEIMALSNKM 1035
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: K3X2K0_GLOUD (DNA topoisomerase 2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2K0_GLOUD) HSP 1 Score: 562 bits (1449), Expect = 2.950e-183 Identity = 287/490 (58.57%), Postives = 357/490 (72.86%), Query Frame = 1 Query: 16 GSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGG-YSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDL-DAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 G S++ FYT+PEY W++ NNG+GWS KYYKGLGTST++EAKEYF+ L THQ+ F + DE D D IDMAFSKKRVE+RKDWLR ++AGTH DY+V+ + Y F+NKELILFSM DN RSIP +VDGFKPSQRKVLF CFKRNLK EIKV QLAGYVSEHSAYHHGE SLNGTII MAQ++ GSNN++LL+P GQFGTRLMGGKDAASPRYIF+ LE+VAR +F P D+ +L YLDDDG SIEP+FYVP++P+ LVNGS+GIGTGWSS +PNY+P D+I+NLR+++ G+ + PWY GF+G I K+S K D + G+ D++T+ I ELPV+TWTQ YKQFLESLL S I+DF+ENHTD V FT+T + L D G+ K FKLE+S++TSNM LFD G + KY+ P I+EEF+ +R+DYY RRKA+L+ K++ + L NK Sbjct: 650 GKNNSKV-FYTIPEYNAWREVTNNGRGWSIKYYKGLGTSTTQEAKEYFSDLKTHQVGFTYDGDE-DGDAIDMAFSKKRVEERKDWLRGYQAGTHVDYDVDDMAYSEFVNKELILFSMADNMRSIPSVVDGFKPSQRKVLFCCFKRNLKVEIKVAQLAGYVSEHSAYHHGEQSLNGTIINMAQDFVGSNNVHLLSPNGQFGTRLMGGKDAASPRYIFTNLEQVARRIFDPLDNDVLNYLDDDGQSIEPDFYVPIIPMALVNGSEGIGTGWSSSIPNYNPLDIIKNLRQKLNGEDLSPLVPWYRGFSGHIIEKSSGKPSDNQTFLVQGLYEIKDESTLVISELPVKTWTQTYKQFLESLL---------------------------ESGTIKDFRENHTDAKVLFTITFEPKTLSDICSAPGGVVKKFKLETSISTSNMHLFDSTGHIKKYENPHEILEEFYAIRLDYYGRRKAALLRKLEEQIKILSNKT 1110
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A024G308_9STRA (DNA topoisomerase 2 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G308_9STRA) HSP 1 Score: 557 bits (1435), Expect = 1.090e-181 Identity = 282/496 (56.85%), Postives = 362/496 (72.98%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVE-MQPWYSGFAGSITAKTSKKGVDG-GYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDL-DAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 P++ GR + FYT+PEY W+ NNG+GW KYYKGLGTST++EAKEYF+ L THQ++F +K +E D D IDMAFSKKRVE+RKDWLR + GTH DYNV+ + Y F+NKELILFS DN RSIPCLVDGFKPSQRKVL+ CFKRNLK EIKV QLAGYVSEHS+YHHGEASL+GTII MAQ++TGSNN NLL+P GQFGTR++GGKDAASPRYIF++LE +A +F P+DD+LL +LD+DG IEPE+YVPV+P++LVNGS+GIGTGWSS +PNY+P D+IENLR RIKG+ + PWY GF GSI +++ + D + GI + D+T+ I ELPV+ WTQ YKQFLE+LL + I+DFKENHTD+ V FT++M E L + ++ G+ K FKLE+S++ SNM LFD DG++ KYD+P I+ F+ +R+ YY +RKA+++ K+ ++ L NKV Sbjct: 615 PIVKCAKGRMKKVFYTMPEYEAWRLVTNNGQGWRIKYYKGLGTSTTEEAKEYFSDLPTHQIDFSYKGEE-DGDSIDMAFSKKRVEERKDWLRGYTPGTHVDYNVDDMPYSEFVNKELILFSRADNMRSIPCLVDGFKPSQRKVLYCCFKRNLKVEIKVAQLAGYVSEHSSYHHGEASLHGTIINMAQDFTGSNNTNLLSPNGQFGTRILGGKDAASPRYIFTKLESIAYKIFDPNDDSLLNFLDEDGQLIEPEWYVPVIPMVLVNGSEGIGTGWSSSIPNYNPLDLIENLRARIKGEEATRPLVPWYRGFTGSIEERSNARDGDSQAFIVRGIYHVTGDSTLVITELPVKVWTQTYKQFLETLL---------------------------ENETIKDFKENHTDSKVLFTISMTPEKLQEIVQSPGGIVKKFKLETSISASNMHLFDADGRIQKYDSPHAIINAFYGIRLAYYGKRKAAMLNKLTDQIQMLANKV 1082
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A120E6S9_9BASI (DNA topoisomerase 2 n=2 Tax=unclassified Rhodotorula TaxID=2640191 RepID=A0A120E6S9_9BASI) HSP 1 Score: 550 bits (1417), Expect = 3.460e-180 Identity = 271/493 (54.97%), Postives = 361/493 (73.23%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLLPGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYDTPQHIMEEFFTLRMDYYHRRKASLMTKMQNEWSKLDNKV 1479 P++ + + ELSF+T+PEY WK ++G+GW KY+KGLGTS + +AK+YF+ +D H+L F+ + E D LIDMAF+KK+ +DRK+WLR F GT+ D++V+ V FINKELILFSM DN RSIP +VDGFKP QRKVLF CFKR LK EIKV QL+GY+SEHSAYHHG+ SL GTI+ +AQN+ GSNNLN+L+P GQFGTRL GGKDAAS RYIF+ + ++ RA+FH DDD +L YL+DDG SIEP +Y+PV+P++LVNG+DGIGTGWSS +PN++P D++ NLRR++ G+ M PWY GF G+I K K+ GY C G++ R+DD+TVEI ELP+RTWTQNYK+ LES + AG +K PA +++D+KE HTDTTVHF VT+ T +AIEK +GL K FK+ S V TSNMV FD G++ KY TP+ I+ +F+ +R+DYYHRRK L+++++ + +L N+ Sbjct: 664 PIVKVTKAKKELSFFTIPEYEAWKAETHDGRGWKIKYFKGLGTSDTNDAKKYFSDMDRHRLPFKELTIE-DRALIDMAFNKKKADDRKEWLRGFVPGTYMDHDVDEVPISDFINKELILFSMADNVRSIPSVVDGFKPGQRKVLFGCFKRKLKNEIKVGQLSGYISEHSAYHHGDVSLQGTIVGLAQNFVGSNNLNVLDPNGQFGTRLQGGKDAASARYIFTNVAQITRAVFHADDDNILQYLNDDGQSIEPNWYIPVLPMVLVNGTDGIGTGWSSYIPNFNPSDIVANLRRKLAGEEMEPMHPWYRGFRGTIE-KADKE----GYKCSGLIERLDDSTVEITELPIRTWTQNYKEMLESWV-------------AGTEKQPA---------WVKDYKEYHTDTTVHFVVTLTTAGKEAIEK-DGLEKVFKISSKVNTSNMVCFDPTGKIKKYATPEDIVSDFYDVRLDYYHRRKKHLVSELELVYDRLSNQA 1127
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Match: A0A482RTD7_9ARCH (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTD7_9ARCH) HSP 1 Score: 537 bits (1383), Expect = 3.550e-180 Identity = 271/457 (59.30%), Postives = 343/457 (75.05%), Query Frame = 1 Query: 1 PLLWMGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAALDTHQLEFEWKSDEQDSDLIDMAFSKKRVEDRKDWLRAFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVLFSCFKRNLKKEIKVVQLAGYVSEHSAYHHGEASLNGTIIAMAQNYTGSNNLNLLNPGGQFGTRLMGGKDAASPRYIFSRLEKVARAMFHPDDDALLAYLDDDGLSIEPEFYVPVVPLILVNGSDGIGTGWSSQVPNYSPRDVIENLRRRIKGQGFVEMQPWYSGFAGSITAKTSKKGVDGGYSCMGIVNRIDDTTVEILELPVRTWTQNYKQFLESLL---PGAEDAKAKGPAKAGAKKPPAKEKEKSTSRYIRDFKENHTDTTVHFTVTMHTEDLDAIEKGEGLYKFFKLESSVTTSNMVLFDQDGQLYKYD 1362 P++ G++ELSFYT+PEY WK+ N GKGW KYYKGLGTS++ EAKEYF+ LDTH+L+F W D++ DLIDMAF+KKRVEDRK WL +AG H DY +TY++F+N ELILFS DN+RSI +DG KPSQRKVLF+CFKRNLK+EIKV QLAGYVSEH+AYHHGEASL TI+ MAQNY GSNN+NLL+P GQFGTRLMGGKDAASPRY+F++LE + RA+FHPDDD LL YLD+DG SIEP Y P++P++LVNGSDGIGTGWSS +P Y+PR++IENLR I+G+ EM PW+ GF G + K K + G +++ID+ TV I ELPV WT +YKQFLES++ PGA A K K + A KE + + +++DFKENHTDTTV FTVT +E L+ +++ GL K FKLES+++T+NM LFD + Q+ K++ Sbjct: 438 PIVKCTKGKTELSFYTIPEYQSWKEENEEGKGWRIKYYKGLGTSSAAEAKEYFSNLDTHELDFTW--DDRADDLIDMAFAKKRVEDRKLWLLGLEAGVHIDYKAAKITYDNFVNHELILFSHADNERSIAHFMDGMKPSQRKVLFACFKRNLKQEIKVAQLAGYVSEHAAYHHGEASLTQTIVGMAQNYVGSNNINLLSPCGQFGTRLMGGKDAASPRYVFTKLENITRAIFHPDDDPLLEYLDEDGQSIEPVHYAPIIPMVLVNGSDGIGTGWSSTIPTYNPREIIENLRLMIQGELPQEMMPWFRGFTGQVQGKAGKD--TSSFVLSGTMDQIDEQTVVISELPVGKWTTDYKQFLESVVIGGPGAAAATNKDKDKEDGQ---AVAKEPAGAPFVKDFKENHTDTTVLFTVTCPSEKLEGLDQA-GLMKKFKLESAISTTNMHLFDSNKQIRKFE 886 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9568.17280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9568.17280.1 >prot_H-paniculata_contig9568.17280.1 ID=prot_H-paniculata_contig9568.17280.1|Name=mRNA_H-paniculata_contig9568.17280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=489bp MGSGRSELSFYTVPEYMGWKDTNNNGKGWSAKYYKGLGTSTSKEAKEYFAback to top mRNA from alignment at H-paniculata_contig9568:604..9098- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9568.17280.1 ID=mRNA_H-paniculata_contig9568.17280.1|Name=mRNA_H-paniculata_contig9568.17280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8495bp|location=Sequence derived from alignment at H-paniculata_contig9568:604..9098- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9568:604..9098- >mRNA_H-paniculata_contig9568.17280.1 ID=mRNA_H-paniculata_contig9568.17280.1|Name=mRNA_H-paniculata_contig9568.17280.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2934bp|location=Sequence derived from alignment at H-paniculata_contig9568:604..9098- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |