mRNA_H-paniculata_contig9556.17275.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A6H5KJD0_9PHAE (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJD0_9PHAE) HSP 1 Score: 304 bits (779), Expect = 4.200e-93 Identity = 163/278 (58.63%), Postives = 200/278 (71.94%), Query Frame = 1 Query: 346 AAWQWESPDPPAELTEEQNQMLDVVIEEVRRSPLSS--AVTHGGRSAIWRYLNAARWGTE-LSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGA-GPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSGTREQQRELLLNYISPEDLRAGQLGCPEEPPFNAEAYLAGGDGEG 1167
+ W WE PP LT EQ ML+ I EV+ SPL S AV +GGR+A+WRYL A+W E + GKRVS +FL+TL WR+ +D VL D+ H + + EA++GKLFVRGT L RPLIW+H G E++A P +++R LVYTVERAIASM PE +KGQFCVVIDCT G G LPSL F ++AV MLM RYPSRLG LF+VN G VY+LW+AISLLL PVTREK+VVVSGT +QQRE+LL +IS + L G+LG PPF+AE+YL GGD G
Sbjct: 17 STWSWECESPPPSLTPEQASMLETTIAEVQASPLCSDAAVANGGRTAVWRYLEGAQWRLEPVRGKRVSDFFLDTLAWRQDGGVDTVL-DRAH--TFVDEASSGKLFVRGTSLLGRPLIWVHAGWEDSASGPEASLRFLVYTVERAIASMEPETSTPASKGQFCVVIDCTATGGDGQLPSLAFVREAVSMLMLRYPSRLGNLFIVNAGNMVYYLWRAISLLLSPVTREKVVVVSGTEQQQREVLLQHISEDALEGGRLGLKGAPPFHAESYLKGGDAGG 291
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A835YZF0_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF0_9STRA) HSP 1 Score: 121 bits (303), Expect = 8.670e-27 Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 385 LTEEQNQMLDVVIEEVRRSPLSSAVTHG-----GRSAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRG-TCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSG 1035
L+E+Q+ M+ + +++ P+ G + WRYL+AA W + K +S Y +TLEWR+ L + ++ + + +L TG ++V G PL+ L R + +VY +ERA+ + E +A FCV+ +C AG +P L ++AV +LM YPSRL +L++VNPG A W+ + LLE TR KIV V G
Sbjct: 3 LSEDQHAMIQSTLRQLQEVPVDLFEQAGVSFPPDEALCWRYLDAAGWRECVRSKPISEYIRDTLEWRRNLKVPKLAAETLLSPALQTNLCTGSIYVDGFDASGDHPLVMFRLARFKGTETTEDFIEYMVYNLERALLRVPQEQ---RALASFCVLFNCDTGDAGQMPRLAAVREAVNVLMRHYPSRLHRLYVVNPGTAFALTWRVVRPLLEANTRNKIVFVRG 222
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A6A5C3G4_NAEFO (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C3G4_NAEFO) HSP 1 Score: 102 bits (253), Expect = 8.200e-20 Identity = 77/236 (32.63%), Postives = 126/236 (53.39%), Query Frame = 1 Query: 373 PPAELTEEQNQMLDVVIEEVRRSPLSSAVTHG-GRSAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCT-FAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSGTREQQRELLLNYI 1074
P + LTEEQN++L+ I+ V L+ +A+ R+L A + + K +++ LEWR+ D + ++ + EA++GKLF RG +RP++++ REN+ D N++LLVYT+ERA+ +M PE + Q C +ID ++ LP L A+Q + +L YP RLG F+V+ W+AIS + PVT+ KI V+G ++ ++ YI
Sbjct: 34 PRSALTEEQNEILNDFIKRVDYDRLTDRERRFLDEAALIRFLRARDYDINKAEKLMNT----CLEWRRSFKPDEITAEEVDS-----EASSGKLFQRGFDKMNRPIVYMFPARENST-DYEKNIKLLVYTLERAVDAM-PEGVE-----QMCWIIDFNGYSTRNSLP-LSVAKQTLNILNDCYPERLGACFMVDTPFIFNIFWKAISPFINPVTKNKIHFVNGKDIEKAKIFGKYI 252
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: D2V0F0_NAEGR (CRAL-TRIO domain-containing protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2V0F0_NAEGR) HSP 1 Score: 98.2 bits (243), Expect = 1.290e-18 Identity = 73/235 (31.06%), Postives = 120/235 (51.06%), Query Frame = 1 Query: 373 PPAELTEEQNQMLDVVIEEVRRSPLSSAVT-HGGRSAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSGTREQQRELLLNYI 1074
P LT+EQN++L+ I+++ L+ + ++ R+L A + + K ++S LEWR+ D + A L E+++GKLF RG +RP+I++ REN+ D N++LLVYT+ERA+ +M PE + Q +ID P A+Q + +L YP RLG F+V+ W+AIS + PVT+ KI V+G ++ ++ +I
Sbjct: 25 PRTSLTQEQNEILNDFIKKIDYDSLTDRERKYLDEPSLLRFLRARDYDLNKAEKLMNS----CLEWRRTFKPDEIT-----AKELEDESSSGKLFQRGFDKNNRPIIYMFPARENST-DYEKNIKLLVYTMERAVDAM-PEGVE-----QMTWIIDFNGYTTRNAPPFSVAKQTLSILNECYPERLGACFMVDTPFIFNIFWRAISPFINPVTKNKIHFVNGKESEKAKIFGKHI 243
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A7S1VXY9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXY9_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.890e-11 Identity = 54/203 (26.60%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 556 TLEWRKLLAIDRVLE------DKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSGTREQQRELLLNYISPEDLRAGQLGCPEEPPFNAEAYL 1146
+L WR+ ++++ D + +E TGK++ RG R +++LH G EN+ + ++N+R LVY++ERAIA+ A ++ K +F +VI P++ + V +L YP R+ + ++ +P + W + ++PVTR+K+ G + R +L+ E G E FN+ YL
Sbjct: 138 SLAWRRDFEVEKIKNCFTPSGDITMRKIIAQENETGKIYARGYDRDGRAILYLHPGLENSN-NEMNNMRHLVYSLERAIATTAKKS----GKEKFNIVISYKGFKLKNAPAISVVRHTVDILQNHYPERMYRAYVCDPPLVFRTFWSIVKPFIDPVTRDKLQFCHG--KAGRHVLMERFDLETTERCACGTRELRAFNSTEYL 333
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A2B7ZMR7_9EURO (CRAL-TRIO domain-containing protein n=2 Tax=Emmonsia crescens TaxID=73230 RepID=A0A2B7ZMR7_9EURO) HSP 1 Score: 76.3 bits (186), Expect = 7.200e-11 Identity = 60/235 (25.53%), Postives = 110/235 (46.81%), Query Frame = 1 Query: 367 PDPPAELTEEQNQMLDVVIEEVRR---SPLSSA-------VTHGGR-----SAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVV 1026
P+PPAELT EQ D+++ V P +SA +T R + RYL A +W + R+ TL WR+ +D++ D + E TGK + G + RP ++L+ R+N ++ LV+ +ER + M P+ + ++++ + +G ++ +Q + +L YP RLG+ +VN +Y ++ I+ ++P+TR K+ +
Sbjct: 74 PEPPAELTSEQQSKYDLLLTTVSEWTTVPTTSAKNAPTEPITDDDRMFLTRECLLRYLRATKWDVPAAINRLRG----TLTWRREYGLDKLTPDY-----ISIENETGKQVILGYDVNARPCLYLNPARQNTEQSD-RQIQHLVFMLERVVDLMGPD------QESLALLVNFSDTRSGQNATIGQGRQTLSILQNHYPERLGRALVVNIPFLIYGFFKLITPFIDPLTRTKLKI 292
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A137QER3_9AGAR (CRAL-TRIO domain-containing protein C23B6.04c n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137QER3_9AGAR) HSP 1 Score: 73.9 bits (180), Expect = 2.240e-10 Identity = 57/185 (30.81%), Postives = 90/185 (48.65%), Query Frame = 1 Query: 472 RSAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAG--PLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKI 1020
R I RY+ AA+W + K + + TLEWR+ D + D+ E+ TG++ + G +P+I++ GREN + +R LV+ VERA M P GQ +VI + P + A++ + +L Y LG +VN + + ++AISL L+PVTR+KI
Sbjct: 62 RDTIPRYMRAAKWNFPDAQKHIKA----TLEWRRAFRPDLIPPDEVKI-----ESETGEIILTGFDRGGQPIIYIRPGRENTETS-LRQLRYLVWCVERAKDLMPP--------GQEYLVIIFVYESTTLHTNPCMSVARKVLNILQQHYVETLGSALIVNLPLLLTCFYKAISLFLDPVTRDKI 228
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A7S0HB85_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HB85_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 5.340e-10 Identity = 66/229 (28.82%), Postives = 100/229 (43.67%), Query Frame = 1 Query: 532 RVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTC-LFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSGTREQQRELLLNYISPEDLRAGQLGCPEEPPFNAEAYLAGGDGEGMPPDGGRDA*LSGRGA 1215
+ ++ ETL WR + ++ E A + E+ TGKL V + RP++ + R N D + LVY +ERA P + A G+ VID ++ ++ + +L YP RL + L+N LW A++ ++PVTR KIV V+G+ EQQ+ L L G LG ++ AY A RDA L+ GA
Sbjct: 54 KATTMLKETLRWRHSFGVSKL---GERHAVIRTESETGKLRVSDSVDRAGRPVLVM-TPRAENTSDHDGQILNLVYHLERATGGRGP--VDGAADGKLVTVIDFKGWSLRNAAPMKTSRATLSILQNHYPERLHRFLLLNVPTLFTVLWNAMNPFIDPVTRAKIVFVTGSAEQQQAALRECFDLAQLEEG-LGGLAPLHWDPAAYFA------------RDAELASAGA 263
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A5N5XC34_9EURO (CRAL-TRIO domain-containing protein n=1 Tax=Aspergillus leporis TaxID=41062 RepID=A0A5N5XC34_9EURO) HSP 1 Score: 71.6 bits (174), Expect = 1.980e-9 Identity = 59/233 (25.32%), Postives = 105/233 (45.06%), Query Frame = 1 Query: 367 PDPPAELTEEQNQMLDVVIEEVRR---SPLSSA-------VTHGGR-----SAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKI 1020
P PPAELT +Q + + V+E V P +SA +T R + RYL A +W + R+ TL WR+ ++++ + + E TGK + G + RP ++L L N + LV+ +ER I M P+ + ++++ +G S+ A+Q + L YP RLG+ ++N + ++ I+ ++P+TR+K+
Sbjct: 80 PSPPAELTSDQQEKYNSVVETVSAWTTVPTTSAKNAPTEPITENERMFLTRECLLRYLRATKWNASEAVARLQ----RTLTWRREYGVEKLTPEY-----ISVENETGKQVILGYDIHARPCLYL-LPSNQNTEKSDRQIEHLVFMLERVIDLMGPD------QETLALIVNYNETKSGQNASVGQAKQTLSFLQNHYPERLGRALVINMPFMIMGFFKLITPFIDPLTRQKL 296
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Match: A0A8H5ZY65_ASPBU (CRAL-TRIO domain-containing protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A8H5ZY65_ASPBU) HSP 1 Score: 71.2 bits (173), Expect = 2.590e-9 Identity = 60/241 (24.90%), Postives = 109/241 (45.23%), Query Frame = 1 Query: 367 PDPPAELTEEQNQMLDVVIEEVRR---SPLSSA-------VTHGGR-----SAIWRYLNAARWGTELSGKRVSSYFLETLEWRKLLAIDRVLEDKEHAASLLKEAATGKLFVRGTCLFHRPLIWLHLGRENNALDPVSNVRLLVYTVERAIASMAPEALGAKAKGQFCVVIDCTFAGAGPLPSLQFAQQAVRMLMARYPSRLGKLFLVNPGVAVYFLWQAISLLLEPVTREKIVVVSGTRE 1044
P PPAELT +Q + + V+E V P +SA +T R + RYL A +W + R+ TL WR+ ++++ + + E TGK + G + RP ++L L N ++ LV+ +ER I M P+ + ++++ + +G S+ A+Q + L YP R+G+ ++N + ++ I+ ++P+TR+K+ RE
Sbjct: 77 PPPPAELTSDQQEKYNSVLEAVSAWTTVPTTSAKNAPKEPITDNERMFLTRECLLRYLRATKWNVPEAVTRLE----RTLTWRREYGVEKLTPE-----FISVENETGKQVILGYDIHARPCLYL-LPSNQNTEKSDRQIQHLVFMLERIIDLMGPD------QETLALIVNYSDTKSGQNASVGQAKQTLNFLQNHYPERMGRALVINMPFLIMGFFKLITPFIDPLTRQKLKFNEDLRE 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9556.17275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9556.17275.1 >prot_H-paniculata_contig9556.17275.1 ID=prot_H-paniculata_contig9556.17275.1|Name=mRNA_H-paniculata_contig9556.17275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp MSGSVQQTTTHNHGKDDENDAAWQWESPDPPAELTEEQNQMLDVVIEEVRback to top mRNA from alignment at H-paniculata_contig9556:1140..6003- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9556.17275.1 ID=mRNA_H-paniculata_contig9556.17275.1|Name=mRNA_H-paniculata_contig9556.17275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4864bp|location=Sequence derived from alignment at H-paniculata_contig9556:1140..6003- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9556:1140..6003- >mRNA_H-paniculata_contig9556.17275.1 ID=mRNA_H-paniculata_contig9556.17275.1|Name=mRNA_H-paniculata_contig9556.17275.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig9556:1140..6003- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |