mRNA_H-paniculata_contig9555.17274.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9555.17274.1 vs. uniprot
Match: A0A6H5LAT3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT3_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.500e-37 Identity = 136/373 (36.46%), Postives = 178/373 (47.72%), Query Frame = 1 Query: 1 QRVFGPVYAGEYLGTTVAVSVLNEQIDVGPDDKNAA----AAAARLRLAATEEIRVLAARLSPNARLARTHGTEVVSVLVPLNVKNAPTISLLGDGGHAGEKAGAAAATVGDDVGVASPPTAMARHCRPVLVVVGELVEGGSLRERV----------------------------------------VRARQSSEATAVGGALRRRQILADVAEGLSCLHGKGLEHGALSSENVLLDAVGRAKLSLYGLTKTRKAVATLAAGRAPAAANQDA---NGXXXXXXAVMRPTPWTPPEALCASSV---------------------------SAFDESDLKPESEQESDEKSTENPREKAVGAADAYAFGMVAWEV 897
Q FGP YA EYLG V+ +VL+ + D+ AA A+A LR +AT E+R L++ + P+ARLART+G E +S L + + + G GG GE+ G AA LV+VGE+VEGGSLR R+ RA S EA AV LRRR++LAD+AEGL+CLH +G+ HGALSSENVLLDA GRAKLSL+GL TRKAVA+ A A+ D G + + WT PE AS+ SA D L E+ ++ ++ + ++KA ADAYAFGM+AWEV
Sbjct: 651 QGAFGPTYAAEYLGIPVSATVLS----INTSDRMAAVWSTASAKLLRRSATSELRALSSLVPPHARLARTYGNESISTQGSLRIVHHKSG---GVGGEQGEEDGPAA-----------------------LVLVGEMVEGGSLRNRIKACAAPAAAAGEETAEVLEEDEEAGVEENLSAKGGEGEEEARAASSGEAPAVQ-LLRRRKVLADIAEGLACLHERGVSHGALSSENVLLDAEGRAKLSLFGLPDTRKAVASFMVSSATASEEWDVLPMKGAAVPRVIDPQGSVWTAPETWVASAARQKAXXXXXXXXXXXXXXXXXXXXXRASAVD---LAAETRVAAEAEALDG-KKKAAFMADAYAFGMIAWEV 988
BLAST of mRNA_H-paniculata_contig9555.17274.1 vs. uniprot
Match: D7FXM4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM4_ECTSI) HSP 1 Score: 144 bits (364), Expect = 6.010e-35 Identity = 129/370 (34.86%), Postives = 176/370 (47.57%), Query Frame = 1 Query: 1 QRVFGPVYAGEYLGTTVAVSVLNEQIDVGPDDKNAA----AAAARLRLAATEEIRVLAARLSPNARLARTHGTEVVSVLVPLNVKNAPTISLLGDGGHAGEKAGAAAATVGDDVGVASPPTAMARHCRPVLVVVGELVEGGSLRERV----------------------------------------VRARQSSEATAVGGALRRRQILADVAEGLSCLHGKGLEHGALSSENVLLDAVGRAKLSLYGLTKTRKAVATLAAGRAPAAANQDA---NGXXXXXXAVMRPTPWTPPEALCASSVS------------------------AFDESDLKPESEQESDEKSTENPREKAVGAADAYAFGMVAWEV 897
Q FGP YA EYLG V+ +VL+ + D+ AA A+A LR +AT E+R L++ + +ARLART+G E +S L + + K+ G++ G A+ LV+VGE+VEGGSLR+R+ RA S EA A LRRR++LAD+AEGL+CLH +G+ HGALSSENVLLDA GRAKLSL+GLT TRKAVA+ A + DA G + + WT PE AS+ + +DL E+ ++ ++ + ++KA ADAYAFGM+AWEV
Sbjct: 688 QGTFGPTYAAEYLGIPVSATVLS----INTSDRMAAVWSTASAKLLRRSATSELRALSSLVPLHARLARTYGNESISTQGSLRIVH--------------HKSXXXXXXXGEEDGPAA------------LVLVGEMVEGGSLRDRIKACGAAAAAAGEERADVLEEGGEAGVEENLSAKGGEGEEEARAASSGEAPAAQ-LLRRRKVLADIAEGLACLHERGVSHGALSSENVLLDAEGRAKLSLFGLTDTRKAVASFMVSSATVSEESDALPMKGAAVPRVLDPQGSVWTAPETWVASAARQKAAXXXXXXXXXXXXXXXXXXXXSASVADLAAETLVAAEAEALDG-KKKAAFMADAYAFGMIAWEV 1025
BLAST of mRNA_H-paniculata_contig9555.17274.1 vs. uniprot
Match: R7RZZ1_PUNST (Kinase-like protein (Fragment) n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=R7RZZ1_PUNST) HSP 1 Score: 55.1 bits (131), Expect = 3.720e-5 Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 1 Query: 490 ILADVAEGLSCLHGKGLEHGALSSENVLLDAVGRAKLSLYGLTKTRKAVATLAA 651
++ D+A GL+ +H GL HG L S NVL+D +GRA+LS +GL T A+LAA
Sbjct: 55 LITDIARGLNYMHASGLVHGDLKSRNVLVDKIGRARLSDFGLATTILGTASLAA 108
BLAST of mRNA_H-paniculata_contig9555.17274.1 vs. uniprot
Match: UPI0019B9D022 (Protein kinase n=1 Tax=Thermoanaerobaculia bacterium TaxID=2651171 RepID=UPI0019B9D022) HSP 1 Score: 55.8 bits (133), Expect = 5.310e-5 Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 376 VLVVVGELVEGGSLRERVVRARQSSEATAVGGALRRRQILADVAEGLSCLHGKGLEHGALSSENVLLDAVGRAKLSLYGLTK 621
V VV ELVEG +LRER+ R E A ++ A VAEGLS H +GL H + EN+++ GRAK+ +GL K
Sbjct: 83 VTYVVTELVEGETLRERLARGPLRMEEAA--------ELAAQVAEGLSAAHARGLIHRDVKPENIVIAPEGRAKILDFGLVK 156
BLAST of mRNA_H-paniculata_contig9555.17274.1 vs. uniprot
Match: UPI0004418585 (kinase-like protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004418585) HSP 1 Score: 53.9 bits (128), Expect = 8.610e-5 Identity = 46/140 (32.86%), Postives = 59/140 (42.14%), Query Frame = 1 Query: 487 QILADVAEGLSCLHGKGLEHGALSSENVLLDAVGRAKLSLYGLTKTRKAVATLAAGRAPAAANQDANGXXXXXXAVMRPTPWTPPEALCASSVSAFDESDLKPESEQESDEKSTENPREKAVGAADAYAFGMVAWEVRLE 906
+++ DVA GL +H GL HG L S NVL+D++G A+LS +GL T ATLA A AN A PE SD+ E + +D YAFGM AWE+ E
Sbjct: 25 ELITDVARGLEYMHASGLVHGDLKSRNVLVDSLGYARLSDFGLATTVLGTATLAP-----TAGSSANWGSFRYMA---------PEL-----------SDI-------------EEKGKTLTWKSDVYAFGMTAWEIFAE 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9555.17274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9555.17274.1 >prot_H-paniculata_contig9555.17274.1 ID=prot_H-paniculata_contig9555.17274.1|Name=mRNA_H-paniculata_contig9555.17274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=307bp QRVFGPVYAGEYLGTTVAVSVLNEQIDVGPDDKNAAAAAARLRLAATEEIback to top mRNA from alignment at H-paniculata_contig9555:6878..8555- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9555.17274.1 ID=mRNA_H-paniculata_contig9555.17274.1|Name=mRNA_H-paniculata_contig9555.17274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1678bp|location=Sequence derived from alignment at H-paniculata_contig9555:6878..8555- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9555:6878..8555- >mRNA_H-paniculata_contig9555.17274.1 ID=mRNA_H-paniculata_contig9555.17274.1|Name=mRNA_H-paniculata_contig9555.17274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1842bp|location=Sequence derived from alignment at H-paniculata_contig9555:6878..8555- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |