mRNA_H-paniculata_contig9503.17242.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A6H5JMA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA6_9PHAE) HSP 1 Score: 281 bits (718), Expect = 5.520e-83 Identity = 148/225 (65.78%), Postives = 180/225 (80.00%), Query Frame = 1 Query: 1 EAIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVTL-HQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVNVALLETSEVVVGAICDTILSLYDEHGAGHATAAVSNIRDLLQKRLNASPTA 672
+A+ATALV+FHKFFMLHSF+KHERF +GSACLFLAAKVEE++KR + +S+ ++VW G +NEK FKRLREK +LIAERCVLHT+GF ++VEHPYS V + +KLF G+GA GG +GA+ ALNRQL QAA SFVNDSLLTTLCLQY P VAA+VVYL+YLYMGLPRV+ LLE VV ICD ILSLYDE GAGHAT V+++RD L++R+ + TA
Sbjct: 66 DAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPSENEKSFKRLREK-ILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGG-KGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGLPRVDTTLLEADVTVVANICDIILSLYDERGAGHATVVVTDLRDKLKQRIMKNTTA 288
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: D8LLM1_ECTSI (Cycline T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM1_ECTSI) HSP 1 Score: 237 bits (605), Expect = 1.420e-69 Identity = 126/187 (67.38%), Postives = 151/187 (80.75%), Query Frame = 1 Query: 1 EAIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVTLH-QNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVNVALLETSEVVVGA 558
+A+ATALV+FHKFFMLHSF+KHERF +GSACLFLAAKVEE++KR + +S+ ++VW G +NEK FKRLREK +LIAERCVLHT+GF ++VEHPYS V + +KLF G+GA GG +GA+ ALNRQL QAA SFVNDSLLTTLCLQY P VAA+VVYL+YLYMGLPRV+ LLE VV A
Sbjct: 53 DAVATALVFFHKFFMLHSFQKHERFFVGSACLFLAAKVEESSKRVEQVMSKSWKVWNGGRDPPAENEKSFKRLREK-ILIAERCVLHTLGFQLTVEHPYSVVMSLLKKLFTMGKGADGG-KGADKALNRQLSQAATSFVNDSLLTTLCLQYRPKQVAAAVVYLSYLYMGLPRVDTMLLEADVTVVAA 237
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A6V1NFC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NFC1_HETAK) HSP 1 Score: 133 bits (334), Expect = 5.380e-31 Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 7 IATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVTLHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGL 507
+ATA V+FH+FF SF++H+RF + +ACL LA KVEE+ K+ + + C+ V G + E ++ ++K+L ER +LHT+GF M +EHPY ++ +V +KL K +G GG + G RQ Q A++FVNDS T+LCL++ P VAA V+LA L+ GL
Sbjct: 54 VATAHVFFHRFFARQSFKQHDRFDVAAACLHLAGKVEESPKKLEVVAATCHAVRHRGAKTLEKESEESKIAKEKILTCERILLHTMGFDMCIEHPYKYLIEVCKKL--KNKGIIGGNQDDAGG--RQFAQTALNFVNDSFRTSLCLRHPPPLVAAGAVFLAALFAGL 216
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A1E7FTI4_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTI4_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.590e-30 Identity = 65/173 (37.57%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 4 AIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVTL-HQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVN 519
AI+TA+V+FH+F+ H+F++H+RF + A L LAAK EEA K+ +T + +CY++ + H + F +L+E+ +L+ ER +LHTIGF +S++HPY D+ +KL + + +L Q ++S NDS T+LCLQ+ P ++A + VYLA ++ G+ +N
Sbjct: 36 AISTAMVFFHRFYAKHAFQEHDRFEVAVAALVLAAKTEEAPKKLNTVIQECYKLKARAMQAGHTKGEDFLKLKER-ILLLERIILHTIGFELSIDHPYKFFVDMIKKLIIMSK------------MMNELVQYSMSTANDSYQTSLCLQFGPKEIATACVYLACMFSGVEPIN 195
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A7S2B1V0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1V0_9STRA) HSP 1 Score: 125 bits (314), Expect = 9.420e-28 Identity = 72/200 (36.00%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 7 IATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWT--NGVTLHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGL--PRVN---VALLETSEVVVGAICDTILSLY 585
IATA V+FH+F+ L SF+K RF I CLFLA KVEE ++ ++ + C+++W + TL+ + + ++ LR +L ER +LHTI F + V+HPY + D +KL G R+ Q+A++F+NDS+ T++CLQ+ P +A++ +YLA +YM + P N + LE + + +IC+ I+ +Y
Sbjct: 51 IATAQVFFHRFYALQSFKKFRRFDIAVTCLFLAGKVEEYPRKLESVIQMCHQIWNKLDKPTLNPDSQDYEFLR-LTILRTERQILHTIAFDLCVKHPYKDLIDTVKKLHQAGL--------IEEKQKREFAQSALNFLNDSMRTSICLQFEPKKIASATIYLATVYMNMNKPEENPDWMKKLEINHQELASICEQIMEVY 241
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: C1FEH1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEH1_MICCC) HSP 1 Score: 120 bits (302), Expect = 5.170e-27 Identity = 83/211 (39.34%), Postives = 122/211 (57.82%), Query Frame = 1 Query: 7 IATALVYFHKFFMLHS--FEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEV-----WTNGVT-LHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALN-RQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVNVALL----ETSEVVVGAICDTILSLYDEHGA 600
IATA+V H+F+ HS ++++RF++ +ACLFLAAKVEE K V Y V + + V +HQ E+ F+ REK VL AER +LHT+GF +VEHPY H+ ++ R+L G R ++ R+ Q A +F NDSL TTLCLQ+C +D+A + V L++ + + N L + + + IC+ I+ LYDE A
Sbjct: 49 IATAVVLCHRFYAKHSHGIKENDRFIVATACLFLAAKVEETPKPLKEVVRVAYLVQHKNEYDDAVKRIHQKER-FEEHREK-VLQAERLILHTVGFDFNVEHPYKHILNIAREL---------GQREEQLEIHHRRATQVAWNFANDSLRTTLCLQFCSHDIARAAVNLSFNILQATQRNPQKLLDERASKDAICEEICNQIMDLYDETNA 248
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A6T9ZKT4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A6T9ZKT4_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.090e-25 Identity = 69/195 (35.38%), Postives = 108/195 (55.38%), Query Frame = 1 Query: 4 AIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVT-------------------LHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGA----LNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVN 519
AI+TA+V+FH+F+ H+F++H+RF + A L LAAK EEA K+ +T + +CY++ T + L + F +L+E+ +L+ ER +LHTIGF +S++HPY D RKL + +N + +L Q ++S NDS T+LCLQ+ P +A S VYLA ++ G+ N
Sbjct: 50 AISTAMVFFHRFYAKHAFQEHDRFEVAVAALVLAAKTEEAPKKLNTVIQECYKLKTRAMQAGRLSQTPNSKDHESSSSYLDTKGEEFLKLKER-ILLLERIILHTIGFELSIDHPYKFFVDQIRKLIQTRQLKYANKTKSNSETMAKMMNELVQYSMSTANDSYQTSLCLQFGPKQIATSCVYLACMFSGVEPQN 243
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A7S2S177_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S177_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.200e-24 Identity = 73/219 (33.33%), Postives = 126/219 (57.53%), Query Frame = 1 Query: 13 TALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNG----VTLHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVNVALLETSEVVVGAI----CDTILSLYDEHGAGHATAAVSNIRDLLQ 645
TA+V+FH+FF SFE+H+RFV+G+AC+FLAAKVEE +R D Q + G + + + R+ +KVL+ ER +L+T+ F +SV HP+ ++ +K+ +G G +G N + QA+ +F+NDSL T +C+++ P ++AA+ V LAY +M +V+ +T++ ++ A+ D ++D A H A + + D+ +
Sbjct: 34 TAMVFFHRFFKHQSFEQHDRFVVGTACVFLAAKVEEDMRRLDEVSKQAQSIRNFGKMSDLAAGEPTQDLIRMIREKVLLCERVLLNTLSFDVSVTHPHIPAFNLIKKIRVQG-----GPKGLN-----EFRQASWNFLNDSLFTDICVKFNPEEIAAASVLLAYYFMKARVEHVS--DTTKRIIQAVERELADRSSCIFDYKRA-HLEAIIHEMMDVYE 239
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A7S4F3M7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3M7_CHRCT) HSP 1 Score: 117 bits (292), Expect = 1.740e-24 Identity = 83/230 (36.09%), Postives = 118/230 (51.30%), Query Frame = 1 Query: 4 AIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVTLHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVNVALL------------ETSEVVVGAICDTILSLYDEHG-AGHATAAVSNIRDLLQKRL 654
+IATA+V++H+FF S+E + RF I + CLFLA+KVEE K+ V + Y + + FK L+E+ +L++ER +L T+GF ++VEH Y R L A + G R L Q A +F+NDSL TT+CLQY P V+A+ VYLA Y+ + L SE + + I+ LYD G A A SN+ + QKRL
Sbjct: 90 SIATAIVFYHRFFAHKSYENYCRFTIATTCLFLASKVEETPKKLKDVVIETYRIQHGRQAPDPESQEFKDLKER-ILVSERVLLQTLGFDLTVEHAY-------RPLLAYVKSIQG---------TRDLAQVAWNFINDSLRTTICLQYAPRHVSAAAVYLAARYLSEHHDKLYELPPHQGGKWYDAFHVSEEAFQDVANQIMELYDSKANGGPALANGSNVALMSQKRL 302
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Match: A0A7S0CCP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP8_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.550e-23 Identity = 62/201 (30.85%), Postives = 114/201 (56.72%), Query Frame = 1 Query: 4 AIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSQCYEVWTNGVT-----LHQNEKPFKRLREKKVLIAERCVLHTIGFLMSVEHPYSHVTDVFRKLFAKGRGAGGGGRGANGALNRQLHQAAISFVNDSLLTTLCLQYCPYDVAASVVYLAYLYMGLPRVNVALLETSEVVVGAICDTILSLYDE 591
A AT +V FH+FF HSF++H+RF + AC+ LAAK EE+ K+ + +C+++ T L + + +L+E+ +L+ ER +LHTIGF +S++HPY + D + L K + + + +L Q +++F NDS+ + LCLQ+ +A + V+++ Y + VN + T E + ++++S+ ++
Sbjct: 79 ATATGMVLFHRFFSKHSFDEHDRFEVAVACILLAAKTEESPKKLSHVILKCHQLKTRATDPGKGMLDPKGEEYLKLKER-ILLLERIILHTIGFELSIDHPYKFLVDQIKSLTGKRKVKYVDSKKDQSKMVNELLQMSMNFANDSMHSNLCLQFSAKFIAHACVFMSACYCKITLVNASPPLTWESALEVPVESLVSISEQ 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9503.17242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9503.17242.1 >prot_H-paniculata_contig9503.17242.1 ID=prot_H-paniculata_contig9503.17242.1|Name=mRNA_H-paniculata_contig9503.17242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=748bp EAIATALVYFHKFFMLHSFEKHERFVIGSACLFLAAKVEEAAKRTDTSVSback to top mRNA from alignment at H-paniculata_contig9503:149..7443+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9503.17242.1 ID=mRNA_H-paniculata_contig9503.17242.1|Name=mRNA_H-paniculata_contig9503.17242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7295bp|location=Sequence derived from alignment at H-paniculata_contig9503:149..7443+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9503:149..7443+ >mRNA_H-paniculata_contig9503.17242.1 ID=mRNA_H-paniculata_contig9503.17242.1|Name=mRNA_H-paniculata_contig9503.17242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4488bp|location=Sequence derived from alignment at H-paniculata_contig9503:149..7443+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |