mRNA_H-paniculata_contig9481.17225.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A6H5J7S9_9PHAE (FCP1 homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7S9_9PHAE) HSP 1 Score: 294 bits (752), Expect = 8.300e-86 Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELVDQARNGSL 459
QVYVRKRPHLDAFLEAVSELFEVVVFTASQ+VYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDD +DEELLHLLPLLKQLIS+SE AGGDVRPFIR+IFKTHELVD+ARNG L
Sbjct: 395 QVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDKSDEELLHLLPLLKQLISESETAGGDVRPFIRNIFKTHELVDKARNGDL 547
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A7S2V5C9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5C9_9STRA) HSP 1 Score: 205 bits (522), Expect = 6.040e-58 Identity = 96/148 (64.86%), Postives = 125/148 (84.46%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELVDQA 444
+V+VRKRPHL+ FL+ VSELFEV+VFTASQ+VYA+ LL++IDP+KK+V+YRL+RDAC+ +EGN+LKDL VLGR+LS+V ++DNSPYAYG+Q+DNGIPIESWFDD D ELL L+P L+ + + DVRPF+R F+T+ELVD A
Sbjct: 46 KVHVRKRPHLEHFLQTVSELFEVIVFTASQKVYADTLLDIIDPEKKYVQYRLFRDACLPVEGNFLKDLGVLGRELSQVVLIDNSPYAYGYQVDNGIPIESWFDDPDDTELLDLIPFLRHIHNVE-----DVRPFVREKFRTYELVDGA 188
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A836CBU7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU7_9STRA) HSP 1 Score: 201 bits (511), Expect = 7.090e-56 Identity = 103/150 (68.67%), Postives = 119/150 (79.33%), Query Frame = 1 Query: 4 VYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELVDQARNG 453
VYVRKRP LDAFL AVS LFEVVVFTASQRVYAE LL+M+DPQ + +RLYRDAC+ ++GNYLKDLNVLGRDL +VAIVDNSPYAY +Q+ NGIPIESWFDD DEEL LLP L++L + D+RP I+ FKTHELV +A G
Sbjct: 78 VYVRKRPGLDAFLAAVSALFEVVVFTASQRVYAEVLLDMLDPQGAHINHRLYRDACLQVDGNYLKDLNVLGRDLRRVAIVDNSPYAYAYQLANGIPIESWFDDDKDEELSLLLPFLQRLADKD-----DMRPTIQQTFKTHELVKKAPIG 222
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A7S3AP22_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AP22_9EUKA) HSP 1 Score: 194 bits (493), Expect = 6.870e-53 Identity = 90/145 (62.07%), Postives = 120/145 (82.76%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELV 435
QV+VRKRPH+D F+E VS+ FE++VFTASQ+VYA++LL++IDPQ+K++K+R++RD+C+ +EGNYLKDL VLGRDL+K AIVDNSP A+GFQ++NGIPIESWFDD D EL++LLP L+ + DVRP IR F+ H+LV
Sbjct: 117 QVFVRKRPHMDYFMEQVSKHFEIIVFTASQKVYADKLLSIIDPQRKWIKHRVFRDSCVLVEGNYLKDLTVLGRDLTKTAIVDNSPQAFGFQLENGIPIESWFDDPNDTELVNLLPFLESMAD-----ADDVRPLIRDKFQLHKLV 256
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A7S0P667_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P667_9EUKA) HSP 1 Score: 193 bits (491), Expect = 7.140e-53 Identity = 90/145 (62.07%), Postives = 119/145 (82.07%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELV 435
QVYVRKRPH++ F+ VS+LFE++VFTASQ+VYA++LL++IDPQ+K++KYR++RD+C+ ++GNYLKDL VLGRDL+K IVDNSP A+GFQ++NGIPIESWFDD +D ELL LLP L+ L S DVRP IR F+ ++ V
Sbjct: 96 QVYVRKRPHMEYFMNRVSQLFEIIVFTASQKVYADKLLSIIDPQRKWIKYRVFRDSCVVVDGNYLKDLTVLGRDLTKTCIVDNSPQAFGFQLENGIPIESWFDDPSDTELLKLLPFLESLQS-----ADDVRPIIRDHFQLYKRV 235
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A7S3XV81_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV81_HETAK) HSP 1 Score: 197 bits (500), Expect = 7.210e-53 Identity = 95/149 (63.76%), Postives = 119/149 (79.87%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELVDQAR 447
QV+VR RPHL FL A +E FEVVVFTASQRVYA+ LL+++DP FVK+RL+R+AC+ ++GN++KDL +LGRDLSK +VDNSPYA+G+QIDNGIPIESWFDD DEELL LLP L++L DVRP IR ++THELV++AR
Sbjct: 182 QVHVRCRPHLKTFLRACAENFEVVVFTASQRVYADALLDILDPHGAFVKHRLFREACLPVDGNFIKDLQILGRDLSKTILVDNSPYAFGYQIDNGIPIESWFDDPNDEELLKLLPFLEELRQ-----SADVRPLIRDRYRTHELVERAR 325
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A0M0J657_9EUKA (Scp1-like small phosphatase 5 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J657_9EUKA) HSP 1 Score: 199 bits (507), Expect = 8.770e-53 Identity = 95/145 (65.52%), Postives = 124/145 (85.52%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELV 435
QVYVRKRPH+D F+E VS+LFE++VFTASQ+VYA++LL++IDPQ+K++K+R++RD+C+ +EGNYLKDL +LGRDL+K AIVDNSP A+GFQ+DNGIPIESWFDD +D ELL LLP L+++ +E+ DVRP IR F HELV
Sbjct: 291 QVYVRKRPHMDFFMERVSKLFEIIVFTASQKVYADKLLSIIDPQRKWIKHRVFRDSCVLVEGNYLKDLQILGRDLTKAAIVDNSPQAFGFQLDNGIPIESWFDDQSDTELLKLLPFLEKM---AEVE--DVRPGIREHFGLHELV 430
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A7S3LZV9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZV9_9STRA) HSP 1 Score: 196 bits (498), Expect = 2.900e-52 Identity = 101/165 (61.21%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELVDQARNGSLIEHRSVSTPSPP 495
Q+YVRKRP+LD FLE VS+ FEVVVFTASQ+VYA+ LL+ +DP +K VKYRL+R++C+ ++GNYLKDL+VLGRDLSK +VDNSP+AY + IDNGIPIESW+DD D ELL L+ LK L + DVRP IR FKT+ LV++ARNG SVS +PP
Sbjct: 212 QIYVRKRPYLDYFLETVSKSFEVVVFTASQKVYADVLLDKLDPTRKLVKYRLFRESCLLVQGNYLKDLHVLGRDLSKSILVDNSPHAYSYHIDNGIPIESWYDDDTDTELLKLIGFLKNLQNVD-----DVRPLIREHFKTYNLVERARNG-----LSVSLSAPP 366
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: T1FZR4_HELRO (FCP1 homology domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FZR4_HELRO) HSP 1 Score: 191 bits (484), Expect = 3.250e-52 Identity = 90/145 (62.07%), Postives = 117/145 (80.69%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELV 435
QVYV+ RP FLE VS+LFEV+VFTAS++VYA +LLN++DPQKK ++YRL+R+ C+ + GNY+KDLNVLGRDLSK IVDNSP A+ +Q+DNGIPIESWFDD D+EL+ LLP L+QL+++ + DVR +RS FK HEL+
Sbjct: 70 QVYVKTRPRHREFLEHVSKLFEVIVFTASKKVYANKLLNLLDPQKKLIRYRLFREHCICVNGNYIKDLNVLGRDLSKTIIVDNSPQAFAYQLDNGIPIESWFDDQNDDELMKLLPFLQQLVTKRD---DDVRQHVRSKFKLHELL 211
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Match: A0A6T0CHV2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0CHV2_CHRCT) HSP 1 Score: 194 bits (494), Expect = 4.440e-52 Identity = 89/149 (59.73%), Postives = 121/149 (81.21%), Query Frame = 1 Query: 1 QVYVRKRPHLDAFLEAVSELFEVVVFTASQRVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTADEELLHLLPLLKQLISQSEIAGGDVRPFIRSIFKTHELVDQAR 447
QVYVRKRPH++ F+ VS+LFE++VFTASQ+VYA++LL++IDPQ+K++KYR++RD+C+ ++GNYLKDL +LGRD++K IVDNSP A+GFQ+ NGIPIESWFDD +D ELL L+P L+ L + DVRP IR F+ H+ V+ AR
Sbjct: 191 QVYVRKRPHMEYFMNRVSQLFEIIVFTASQKVYADKLLSIIDPQRKWIKYRVFRDSCVIVDGNYLKDLTILGRDMAKTCIVDNSPQAFGFQLSNGIPIESWFDDPSDTELLKLIPFLESLQT-----AEDVRPLIRDHFQLHKRVEGAR 334 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9481.17225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9481.17225.1 >prot_H-paniculata_contig9481.17225.1 ID=prot_H-paniculata_contig9481.17225.1|Name=mRNA_H-paniculata_contig9481.17225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp MIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGback to top mRNA from alignment at H-paniculata_contig9481:1614..7950+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9481.17225.1 ID=mRNA_H-paniculata_contig9481.17225.1|Name=mRNA_H-paniculata_contig9481.17225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6337bp|location=Sequence derived from alignment at H-paniculata_contig9481:1614..7950+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9481:1614..7950+ >mRNA_H-paniculata_contig9481.17225.1 ID=mRNA_H-paniculata_contig9481.17225.1|Name=mRNA_H-paniculata_contig9481.17225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig9481:1614..7950+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |