mRNA_H-paniculata_contig946.17207.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: D7FMZ8_ECTSI (Phosphomevalonate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMZ8_ECTSI) HSP 1 Score: 705 bits (1820), Expect = 2.410e-246 Identity = 386/604 (63.91%), Postives = 444/604 (73.51%), Query Frame = 1 Query: 187 INDKSDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDA------ALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSWE 1980 +N + E C TVSAPGKVLVAGGYLVLDRPN+GVVLAATARF+TSVKWT+E+ P A E LR+KVESPQFR ++WY+C+ YEDGRLP LL+S DQ SN+FVER LTYVLGYLL+A G K + + + + AG+ LAIKLRADNDFYSQTSQL RGLP T+ ALATLPPFLECP+++DGAVVVAKTGMGSSAAL+SSLVGALLSFFG AR PC + D A G+D VNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTH YTRFSPSE+AD LSAGD ++A +G SA PTP++R + CV+A+GGWDAER QLRLP CFRLLMGDVCGGSSTPSMV+KVQAWRA PSTA AKE+WS LGSTN+ IA LN++ + TGG S FEA K LSALP KWAE + L S+++L+ L+ AFAKAR+LLR+MGE AGVPIEPPVQTKLV+AT LPGVLCAGVPGAGGVDAVFAI VHP++E GVR+LWASWR G D + +GE G VCPLLL+ASE GLEGG + +R L WE Sbjct: 1 MNGSTGEECTTVSAPGKVLVAGGYLVLDRPNIGVVLAATARFFTSVKWTEEKTPAPVAAP--EKGLQQSLLRIKVESPQFRSVHWYECVMYEDGRLPVLLASSDQTSNVFVERALTYVLGYLLQAKGVGGGKSND----VKDTVRSAGDKGHALAIKLRADNDFYSQTSQLRARGLPSTSGALATLPPFLECPVSEDGAVVVAKTGMGSSAALVSSLVGALLSFFGAARLPCFDGTPDEEPTGAPACGSPSGTDAAVLGVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHTYTRFSPSELADALSAGDAASA-------------DGSSGFSASPTPIERTTACVQARGGWDAERSQLRLPPCFRLLMGDVCGGSSTPSMVRKVQAWRAHPSTADQAKELWSTLGSTNTVIAKTLNALAAMAAVVPGGSTGGQS-FEADAKVLSALPPSKWAE-LAGSGTLGADSLQELLHLRTAFAKARQLLREMGEDAGVPIEPPVQTKLVNATSTLPGVLCAGVPGAGGVDAVFAIVVHPDAEDGVRDLWASWRVGA---------DTESEGE---GATVCPLLLTASEGGLEGGIVSSRTLGWE 571
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A835YYC0_9STRA (Phosphomevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC0_9STRA) HSP 1 Score: 409 bits (1051), Expect = 5.000e-131 Identity = 269/598 (44.98%), Postives = 340/598 (56.86%), Query Frame = 1 Query: 220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSS--DAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSWE*VGTIQSHL 2007 VSAPGKVL+ GGYLVL++PN G+VL TARF+T+ W + P ++++ + Q L + V+SPQFR Y+Y C F G LP L Q SN++VE TL YV+ +L A+ M L+G VL IKL ADNDFYSQT+QL RGLP TAEALA+LP FL CP DG + V+KTGMGSSAA+I+SLVGALL F P + + DA+ NV EG + + HNLAQACH AQGK+GSGFDV+AAVYGTH+YTRFSP+ +AD LSA DG D R+ V A WD +R + LP F LLMGDV GGSSTPSMVK V WRA ST + ++W L N++I LL ++ L + S A +HLS LPS + + + L +L+ AF + R LLR+MG+ AGVPIEPP QT L +AT ALPGVLC+GVPGAGGVDA++AI VHP + S V++LWASW+ + DA R VCPLLL A+ + L G + + L TI H+ Sbjct: 16 VSAPGKVLLTGGYLVLEQPNSGIVLGTTARFHTTTCW---ERYAPLCLLLQQTSSHTQNLAITVDSPQFRQQYYYTCSFPPAGVLPVLSPKTGQPSNVYVECTLKYVMAFL---------------ATEMAEQQLSG----VLHIKLEADNDFYSQTAQLQARGLPVTAEALASLPTFLPCP-TVDGHLQVSKTGMGSSAAMITSLVGALLVTFHAVELPSADTPTICDASGNVVEG-----------MRIVHNLAQACHAAAQGKIGSGFDVAAAVYGTHVYTRFSPTVLADVLSA--------------TDGEEGVGD----------RLRFAVVATQ-WDLKREPIHLPQGFCLLMGDVQGGSSTPSMVKSVLKWRAAESTKDSSADLWGKLAQVNNSIRELLQELS--GLDGSGSSSSNSLSAAATYQHLSLLPSHQRG-------SVSSTASSSLCKLRDAFVQMRALLREMGDAAGVPIEPPEQTALANATAALPGVLCSGVPGAGGVDAIYAIVVHPSAASAVQDLWASWQT----VSSTGTTDAQRPA-------VCPLLLRATGAALGDG-IVCKVLDHLNKSTISDHV 533
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A7S2LKP2_9STRA (Phosphomevalonate kinase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKP2_9STRA) HSP 1 Score: 295 bits (755), Expect = 2.350e-86 Identity = 233/615 (37.89%), Postives = 307/615 (49.92%), Query Frame = 1 Query: 214 ITVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFYTSVKWTDEQASIPPAGTVEES-RAFPQRLRMKVESPQFRMIYWYDCIFY---------EDGRLPTLLSSPDQAS---NIFVERTLTYVLGYLLEAGRAGAE----KIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCV-EAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRA-DPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDK-WAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVR------ELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW 1977 ++VSAPGK LVAGGYLVL+ PN GVVLAA RF+T++ + + G + S A + + + V SPQF I+ Y + +D L P AS N FVERTL GYL ++ G E + + G + E +AL AIKLRADNDFYSQ + L RGL T + + +L PFL CP + +G V+V KTGMGSSAAL++S+VGALL FFG + P D + G + + E L + HNLAQ CHC AQGKVGSGFDVS+AV+G+H+YTRFS I +K + ++ D S T ++ + V + WD + LP LLM DVCGGS +PSM +K+ W+ + T L+ W L N IA LL+ T G + T P W EF D+ MQ L+ L+ AF ++R+ L+ MG AGVP+EP QT L DAT LPGV+ AGVPGAGG DA+F I V +G + ++ WR D+ DN VCPL + A+ S G L L W Sbjct: 64 VSVSAPGKALVAGGYLVLESPNPGVVLAADGCRFHTTIMFRQPCNTSKEGGVIGNSINATWESVPLDVYSPQFDKIFCYYLSYSLTGEDGDDSDDDGEDVLRLQPRTASYEPNKFVERTLLLAFGYLRQS--LGKELFHSRFRQHGLNSNERVAL--------AIKLRADNDFYSQINHLKQRGLDLTPQDVESLEPFLPCPKDSEGKVIVNKTGMGSSAALVTSIVGALLQFFGASSLPMI----DGEMTETVGQENQE----EGLRIAHNLAQICHCYAQGKVGSGFDVSSAVFGSHVYTRFSKGVI-------NKFIEDVEVRNETLK------DGLSLAETDSSQLFELVTDIDKKWDCTVQPINLPEGLELLMADVCGGSESPSMARKILEWKKKNRETGFLSGYYWKDLKRCNKKIASLLSDQYTKKPFCNGLVRDGPLIIASRTAEQWKKPMPSTWHEFDGSSWDVAMQ----LLDLRMAFLESRQNLKGMGTAAGVPVEPDSQTTLADATMKLPGVVAAGVPGAGGYDALFVIYVKGPPTNGGKSDQVRDDIGNLWR----DLSNQDNSTV-----------VCPLSVRAAGS----GGLCASSLQW 624
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A1V9Z1M7_9STRA (Phosphomevalonate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1M7_9STRA) HSP 1 Score: 289 bits (740), Expect = 6.220e-86 Identity = 215/580 (37.07%), Postives = 281/580 (48.45%), Query Frame = 1 Query: 220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTL 1956 VSAPGKVL+AGGYLVL+ G VLAA++ F+TSVK + I +G + + V SPQF E+G S + N +VE+T+ L G GAE + G ++ L I L ADNDFYSQ+ L RGL T LA LPPFL CP+ND G ++ KTGMGSSAALI+SLVGA+L FF P +SS+ A +D+ HNLAQ H +AQ K+GSGFDVSAA YG Y RF P I ++ +K+ + SA ++ C++ Q WD +P ++MGDV GS+T SMV+KV AW+ ADP ++ +W +L + N I +S+ PT D + L+A S KW + Q L+ ++ F + R LLR+MG AGVPIEP QT L+DAT LPGVL GVPGAGG DA+FAI +HP S V W+ W A R V LL+ + SG +GG L Sbjct: 4 VSAPGKVLIAGGYLVLEPLYAGAVLAASSCFHTSVKLIQKSTEILGSG-----------INVIVLSPQFHQTL--QGTLSENG----FTLSKESPQNPYVEKTMQVCAKAL--TGLLGAEFAQKLGKMAEKHS---------LEITLEADNDFYSQSEHLVKRGLAMTRANLAQLPPFLPCPLNDQGQAIIMKTGMGSSAALITSLVGAILRFFDAVTLPTTASSTTTA----------------GVDIVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQRYNRFHPDRIQSFVA--EKNLSNISA----------------------SELTHCIKTQSLWDNVVKPFGIPPNMHMIMGDVNAGSATVSMVRKVLAWKSADPKG---SQTLWESLNAKNMQIISCFDSL----------PTASDE----IWLRLAATTSAKWP-------SIHAQLGNALVAMQTTFYEIRALLREMGNGAGVPIEPTEQTALIDATMQLPGVLFGGVPGAGGNDAIFAIVLHPSVLSQVETFWSKWT-------------ATR---------VSALLVDVAPSGFQGGLL 469
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: B8BYG3_THAPS (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYG3_THAPS) HSP 1 Score: 291 bits (746), Expect = 7.250e-84 Identity = 230/626 (36.74%), Postives = 313/626 (50.00%), Query Frame = 1 Query: 199 SDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQ---------------ASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEY---LALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNES-LDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADP-STATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSA------LPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHP-----ESESGVRELWAS-WRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW 1977 S+ +TVSAPGKVL+AGGYLVL+ PN GVVLAA RF+T+V + + +I T+ + + + + V SPQF ++ Y RL LL S D SN FVER+L L Y ++ L E+ L + LAIKLRADNDFYSQ + L RGL T + + +L PFL CP ++ G +VV KTG+GSSAAL++SLVGALLSFF P + D G++ + ++E L + HNL+Q CHC AQGKVGSGFDVS+AVYG+HIYTRFS + I L + D + G G D + L+ + + WD + LP LLM D+CGGS +PSM KK+ W+ + L W L N+ I L+++ LAS+ G + +A +PS W EF D+ +L+ L+ AF ++R+ L+ MG+ A VP+EP QT L +AT LPGV+ +GVPGAGG DA+F + V + VR+ A+ WR D Q + VCPL + A+ G E G L L W Sbjct: 187 SNPSTVTVSAPGKVLIAGGYLVLESPNPGVVLAAKGCRFHTTVMFR-QPFNIGVGDTLGLNAVGMESIPLDVYSPQFDKVFSY--------RLSYLLGSQDDDDVAIRLQPRHPETHTSNKFVERSLLLALSY------------IQQSIGLQEFHSKLRQQDDNGGALAIKLRADNDFYSQITHLKQRGLDLTPKNIESLEPFLPCPKDEMGNLVVNKTGLGSSAALVTSLVGALLSFFDVVSLP---------VTKDGGTNSNNKELHEEGLRIAHNLSQICHCHAQGKVGSGFDVSSAVYGSHIYTRFSENVINRFLESVD-----------AQKGFEGGLDLTGILSQQLRELVNDTTKE--WDCAVTPISLPQGLELLMADICGGSESPSMAKKILEWKKNNRKVGFLDDYYWKDLKRCNNKIVSLISN----QLASQTVLKGLQRDGPVILASRTAEQWKKPMPS-SWHEFEGSSWDI----AGKLLDLRMAFMESRQNLKGMGKAADVPVEPDEQTNLANATMKLPGVVASGVPGAGGYDALFVVYVKGTVTCVDKSDSVRDNIANLWR------------DFSNQNDTT---VVCPLSVKAAGFGGENG-LCASALRW 744
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A1V9YNS4_9STRA (Phosphomevalonate kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNS4_9STRA) HSP 1 Score: 282 bits (721), Expect = 3.990e-83 Identity = 210/545 (38.53%), Postives = 273/545 (50.09%), Query Frame = 1 Query: 214 ITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLS------SPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQ-LKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASW 1824 + VSAPGKVL+AGGYLVL+ G VLAA++RF+T+V ++P AG L + + SPQF L +LS SP+ +N +VE+TL L G GA GA+L A L I L ADNDFYSQ+SQL RGLP T + LATLP FL CP++ DG ++ KTGMGSSAALI+SLVGA+L FFG P +S++ + +D+ HNLAQ H +AQ K+GSGFDVSAA YG Y RF P I + G N D ++A ++ C+ AQ WD LP R++MGDV GS+T SMV++V AW+ ADP +T +W L + N I ++ S V L+ S W + E V ++Q ++A F + R LLR MG AGV IEP QT L+DAT +PGVL GVPGAGG DA+FA+ +HP V WA+W Sbjct: 4 VRVSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTVSLA--APTVPTAG-----------LAVVICSPQFHQT------------LSGVLSADVFELSPESPANPYVEKTLQVCAKAL--HGLLGAS----FGANLASLSA-----EHSLLITLEADNDFYSQSSQLLERGLPVTRDNLATLPAFLPCPVDADGRAIIMKTGMGSSAALITSLVGAVLRFFGSVTLPTPTSTTSSP----------------GVDVVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFHPDRIKAFV------------------GQRNLADLSAA------ELATCISAQELWDNVVKPFGLPPSMRMIMGDVNAGSATVSMVRQVLAWKSADPVGSTA---LWEKLNAKNMAIVAQFEALPVVS--------------PHVWAQLATTTSASWPQVHPE--------VGTILQAMQATFYEIRSLLRSMGTQAGVGIEPAEQTALIDATMQVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVEAFWATW 447
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: K0TGY4_THAOC (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGY4_THAOC) HSP 1 Score: 286 bits (731), Expect = 5.890e-82 Identity = 239/623 (38.36%), Postives = 323/623 (51.85%), Query Frame = 1 Query: 193 DKSDEGCI-TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDG--RLP--TLLSSPDQAS---NIFVERTLTYVLGYLLEA--GRAGAEKIVETGASLMEYLALAGEGARV-LAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEI---ADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAW-RADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSA------LPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVH-PESESG----VRELWAS-WRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW 1977 D SD G I TVSAPGK LVAGGYLVL++PN G+VLAA+ RF+TS+ + S A + + + SPQF ++ Y + +G +P L P +A N FVER+L LGYL ++ +A E++ ++ G RV LAIKLRADNDFYSQ + L RGL T LA L PFL CP + G +VV KTGMGSSAAL++SLVGALL+FFG A+++ E +D + E L L HNLAQ HC AQGKVGSGFDVSAAVYG+H+YTRFS + I ++LS+ ++ A + S D L R+ ++ WD + LP LLM DVCGGS +PSM +K+ W R+ T + W L N+ IA LL TT+ + G + + +A +PS W EF D+ ++ L+ L+ + +AR+ L+ MG A VP+EP Q+ L + T LPGV+ AGVPGAGG DA+F + V P++ G VR+ S W+ R E+ VCPL + AS G++ G L + W Sbjct: 164 DASDMGTIITVSAPGKALVAGGYLVLEQPNPGLVLAASGCRFHTSITFRPPHTSQVSTVIGASINAAWSSIPLDIYSPQFDKVFSYYLSYSMNGDQNVPESVLELQPRKAPHEPNKFVERSLLLSLGYLRQSLGPKAFHERLHPMNSN----------GGRVALAIKLRADNDFYSQIAALKDRGLDLTPSNLAALEPFLPCPKDATGKLVVNKTGMGSSAALVTSLVGALLTFFG-------------AISISEPTDDG-VKQQEGLRLAHNLAQISHCYAQGKVGSGFDVSAAVYGSHVYTRFSKTIIHPFLESLSSANEGEALQLTGTLSRD---------------LVRLVD--DSDRAWDCTVHPVALPPGLELLMADVCGGSESPSMARKILDWKRSKRRTGFMDDYYWKDLKRVNAKIARLL----TTTFKEQTFLDGLERDGPVILSTRTAEQWKKPMPS-SWHEFEGSSWDVALK----LLDLRMSILEARQNLKGMGNAASVPVEPAEQSLLANETMKLPGVVAAGVPGAGGYDALFVVYVEGPKTNDGSSDHVRDSICSLWK---------------RISEENSATTVCPLSVRAS--GIDSG-LRASDVEW 718
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A024UL17_9STRA (Phosphomevalonate kinase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UL17_9STRA) HSP 1 Score: 276 bits (707), Expect = 5.570e-81 Identity = 218/588 (37.07%), Postives = 277/588 (47.11%), Query Frame = 1 Query: 220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSV---KWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLP--TLLSSPDQASNIFVERTLTYVLGYLLEA-GRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYT 1962 VSAPGKVL+ GGYLVLD G V+AA++RFYTS+ D+ ++ P S A P R + SPQF G L + SPD N +VE+T+ + L+ G A E+ V L + L AI L ADNDFYSQ QL +GLP + LA+LPPFL ++D G ++KTGMGSSAALI+SLVGALL FFG A P D+ DA+ V DL HNLAQ H +AQ K+GSGFDVSAAVYG +Y RF P I L + DP ++ WD LP L+MGDV GS+T SMV+KV AW+ ADP + +W L +N I LL + T + LS L +W E D + + L ++ F R LRDMG+ AGV IEP QT L+DAT +PGVL AGVPGAGG DA+FAI +H + V W++W+ V LL+ A+ +G GG L T Sbjct: 3 VSAPGKVLITGGYLVLDPAFSGAVIAASSRFYTSITLESLKDDDVALAP------STAVPVR----IHSPQFHQSM--------QGVLTASSFHISPDSIPNPYVEKTIRICVVALVGLLGAAAFERHVHDMLRLRQSL----------AITLEADNDFYSQRDQLHNQGLPVNRKTLASLPPFLPSLLDDAGHAKISKTGMGSSAALITSLVGALLGFFGAANLPTDAGPHDASTQV-------------GADLVHNLAQIAHSIAQEKIGSGFDVSAAVYGNQLYNRFRPDAIEPFLKE-----------------NIEQVDP----------VALAAHLTTPWDNVVRPFCLPDGMHLIMGDVNAGSATVSMVRKVLAWKSADP---VESAALWEKLNGSNQQIPNLLEQLHTLQTTKAN----------GTLEKLSHLSHHQW-----ESTDADVGRL--LSTMRQTFLTIRGYLRDMGDLAGVQIEPADQTALIDATMDVPGVLFAGVPGAGGNDAIFAIVLHADVLDRVEAFWSTWKTTS----------------------VSALLVDAAVNGFRGGLLRT 480
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A067BR68_SAPPC (Phosphomevalonate kinase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR68_SAPPC) HSP 1 Score: 270 bits (689), Expect = 1.880e-78 Identity = 202/546 (37.00%), Postives = 268/546 (49.08%), Query Frame = 1 Query: 220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLS------SPDQASNIFVERTLTYVL----GYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASW 1824 VSAPGKVL+AGGYLVL+ G VLAA++RF+T+V AS+ P+ L + V SPQF + L +LS SP +N +VE+TL G L A A + +T + L I L ADNDFYSQ++QL RG P T E LA LP FL CP++ G V+AKTGMGSSAALI+SLVGA+L FFG P S++ +D+ H+LAQ H +AQ K+GSGFDVSAA YG Y RFSP + ++ + SA AP+ ++ C++++ WD LP ++MGDV GS+T SMV++V AW+ ADP+ + +W L + N I ++ P D V L+ PS W L L+ ++A F + R LLR MG AGV IEP QT L+DAT +PGVL GVPGAGG DA+FA+ +HP V W++W Sbjct: 10 VSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTVSL---DASVTPSPA----------LAVTVHSPQFHQV------------LTGVLSADAFELSPQSPANPYVEKTLQVCAKALHGLLGPAFGAKLASLAKTHS---------------LRITLEADNDFYSQSAQLLERGQPVTREHLAKLPAFLPCPLDASGTPVIAKTGMGSSAALITSLVGAVLRFFGAVTLPTAQSAA----------------ATPGVDIVHHLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFSPERVQSFVAQKNLSAI---APAD---------------------LAACIQSR--WDNVVKAFGLPHNMHMIMGDVNAGSATVSMVRQVLAWKKADPAG---SHALWETLNAKNMQIVAQFEAL----------PAVADD----VWARLAEAPSTSWVH-------LNAVLGAALLAMRATFEEIRHLLRTMGSAAGVAIEPEEQTALIDATMRVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVETFWSTW 449
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A7S4A8Z6_9STRA (Phosphomevalonate kinase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8Z6_9STRA) HSP 1 Score: 270 bits (690), Expect = 2.020e-78 Identity = 214/586 (36.52%), Postives = 285/586 (48.63%), Query Frame = 1 Query: 199 SDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDD-GAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLD-LTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAER-GQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRA-DPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVH-PESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGL 1941 SD +TVSAPGK+L+AGGYLVL+ PN G V+AA RFYTSV ++ S ++ Q +R++VESPQF + Y YE + S +++ N FVE++L L YLL++ + A S +E L +RADNDFYS LS AE +A LP FL CPI+ D G VVV KTG+GSSAAL +SLVGAL+ +F ++ R E L + HNLAQ CHC AQGKVGSGFDVSAA +GTH+Y RF + D L D+ + + N D + L+++ + V W + L LP +L++ DV GGS +PSM + V W+A + +T WS L N I + L +++ D LS LPS W+ S L+ L+ F R+ LR MGE A VPIEPP Q +L DAT LPGV+ A VPGAGG DAV + ++ PE + ELW+SW+ VCPL + A + GL Sbjct: 6 SDIPGVTVSAPGKILLAGGYLVLEAPNAGFVVAADKRFYTSVNAGNDDNSNDDGDEIK------QPMRIRVESPQFHSTWNYT---YEAPNCHLVPSPNNESVNPFVEKSLRVCLIYLLQSSKLTASTGDTASPSSLEIL-------------IRADNDFYSVLPHLSEDSKKTPAE-VAALPKFLPCPIDPDTGKVVVHKTGLGSSAALTTSLVGALVHYFLRSS---------------------QERKEEHLSGIIHNLAQICHCHAQGKVGSGFDVSAACHGTHVYRRFPKCLLPDLLQLLDR-----------FEINENAKDQPVLLGETLKKLVELVP----WKEDMVAPLNLPNDLQLILADVRGGSESPSMARTVLKWKAAEKNTDNNEVPYWSPLSRLNPKIVEAIQ------LLAKEGTDNVD------YDSLSKLPSSDWS----------TDSDSPLVSLRDTFLNIRKELRSMGEAADVPIEPPPQQELCDATSKLPGVVTALVPGAGGYDAVACLYINRPEVVRSIGELWSSWKSP----------------------VVCPLAVRAGDEGL 488 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig946.17207.1 >prot_H-paniculata_contig946.17207.1 ID=prot_H-paniculata_contig946.17207.1|Name=mRNA_H-paniculata_contig946.17207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=602bp MRSINDKSDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKback to top mRNA from alignment at H-paniculata_contig946:17845..23692- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig946.17207.1 ID=mRNA_H-paniculata_contig946.17207.1|Name=mRNA_H-paniculata_contig946.17207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5848bp|location=Sequence derived from alignment at H-paniculata_contig946:17845..23692- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig946:17845..23692- >mRNA_H-paniculata_contig946.17207.1 ID=mRNA_H-paniculata_contig946.17207.1|Name=mRNA_H-paniculata_contig946.17207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3612bp|location=Sequence derived from alignment at H-paniculata_contig946:17845..23692- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |