mRNA_H-paniculata_contig9458.17204.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: D7FIP2_ECTSI (Pre-mRNA-splicing factor 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP2_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 5.210e-147 Identity = 350/467 (74.95%), Postives = 365/467 (78.16%), Query Frame = 2 Query: 224 MDLLKAELERKKQQTSELVTKAGSNKGGRRFLRRGDVARLEKEEREKEQANLKRVRDEKXXXXXXXXXXXXXXXXXXXXXXXXXGKGSPLDQEPHEGTENDDSDITTIAKKTGTGEATDHVVAXXXXXXXXXXXXXXXXXXXXXEEVPEREAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGR-DEPIVAAGK-GDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPD------KEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKVR 1600 MDLLKAELERKKQ+TSELV KAG KGGRRF+RRG+ ARLEKEER K QA+L R+R+E XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX +EVP +EAK RLR+L LPITLFGET AQR+ARLL AEEDKGHHQDDFTL DGHNVNNEFLGNVS+DLTGSHLDAATGR DE GK GDD XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX K KEM RNKLVR+FFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCK K LPDGILNNLVTMINFMKEGEFV+AND+Y+LTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKR DI PSKKVR Sbjct: 1 MDLLKAELERKKQRTSELVAKAGGEKGGRRFVRRGEAARLEKEERLKNQADLIRLREEXXXXXXXXXXXXXXXXXXX---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAQEDEVPAKEAKARLRALCLPITLFGETQAQRSARLLLAEEDKGHHQDDFTLADGHNVNNEFLGNVSSDLTGSHLDAATGRNDETAAGDGKAGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGAADKGDGVXXXXXXXXXXXXXXXXXXEDAADKEAGLDGEVKEMERNKLVRTFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKQKALPDGILNNLVTMINFMKEGEFVRANDIYILTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRPDIAPSKKVR 440
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: A0A836CGW5_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW5_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.220e-71 Identity = 117/151 (77.48%), Postives = 137/151 (90.73%), Query Frame = 2 Query: 1145 VRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 VR FF+ LLK+WE DLNARP+ VK ++QG+ +T+TQKQ+KDY+RP+FKLCK L GIL NLV M+NFMKEGEFVKA+DVY+LTAIGNAPWPIGLTMVGIHERSGRE+I S+NVAHIMNNEAQRKYLVS+KRLMT+LQ+KRTD+PPSKKV Sbjct: 85 VRRFFKTLLKQWEEDLNARPEQVKGSIQGRRDTRTQKQSKDYLRPMFKLCKQHALNPGILANLVKMVNFMKEGEFVKAHDVYMLTAIGNAPWPIGLTMVGIHERSGREKIESRNVAHIMNNEAQRKYLVSIKRLMTWLQEKRTDVPPSKKV 235
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: A0A7S2S6W9_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6W9_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.510e-66 Identity = 226/458 (49.34%), Postives = 276/458 (60.26%), Query Frame = 2 Query: 224 MDLLKAELERKKQQTSELVTKAGSNKGGRRFLRRGDVARLEKEEREKEQANLKRVRDEKXXXXXXXXXXXXXXXXXXXXXXXXXGKGSPLDQEPHEGTENDDSDITTIAKKTGTGEATDHVVAXXXXXXXXXXXXXXXXXXXXXEEVPEREAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGRDEPIVAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 M+ LKAEL ++ +T EL K G+ GGR+F+RRGD+A LE++E + + +R R XXXXX K + +D+ D+D A G A V ++P E K RLRS+G ++ FGET R RL EE+ DDF + GH+ N FL S +G D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A + +LVR +F+GLL++WEM LNARPDH KRT QGK++TKTQKQ KDY+RPLFKLCKHKE+P IL NL MI F KEGEFVKAND Y+ TAIGNA WPIG+T+VGIH+RS +++ VAH+MNNE QRKYL SVKRL+ + Q++R D+PPSKKV Sbjct: 4 MEALKAELSARRSKTEELKAKTGN--GGRKFVRRGDIAALEQKEARERTEDFERRRQXXXXXXXDDRRGGAELHERLI-------KRARVDRSA-------DADAAEEAVAEGGAAAEGERVV----------------------DLPPDEVKSRLRSMGQVVSFFGETDTDRYLRLRKIEEEGVTGDDDFRMHGGHDTRNVFLDQDSR-RSGVERDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPVDDF--------QLVRDYFKGLLRDWEMQLNARPDHEKRTAQGKIDTKTQKQCKDYIRPLFKLCKHKEVPADILYNLKRMIMFAKEGEFVKANDAYIQTAIGNAAWPIGITLVGIHQRSAHDKVQVGQVAHVMNNEMQRKYLQSVKRLIRFEQNRRVDVPPSKKV 414
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: D0NFF0_PHYIT (Pre-mRNA-splicing factor 18 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFF0_PHYIT) HSP 1 Score: 215 bits (547), Expect = 1.300e-59 Identity = 132/311 (42.44%), Postives = 172/311 (55.31%), Query Frame = 2 Query: 674 EAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGN---VSADLTGSHLDAATGRDEPIVAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 + + RLR LG PITLFGE+ R RL AE D + + L GH++ N F+G V D + DAA +E +A D G G + D+E +K+V FF+G+L+ WE DL +RPDHVKRT QGK+ KT KQ KDY+RPLFKLCKH+++P IL LV ++ F ++GEFV AND Y+ AIGNA WPIG+TMVGIHER+GRE+I+S AH+MNNE+QRKYL SVKRLM+Y Q +++ PSK+V Sbjct: 94 DLRRRLRELGEPITLFGESMKDRMTRLRRAEMDAVT-KHEVELGAGHDIRNRFVGGDGGVHGDQKDTADDAAEDAEEFDIADTAEDGGKSKTGG-----------------------------------------------------GNEEDEEKDADKMVYRFFKGMLQRWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPSDILPILVEIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQS-ISNVLPSKRV 349
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: A0A2D4CCV0_PYTIN (Pre-mRNA-splicing factor 18 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCV0_PYTIN) HSP 1 Score: 211 bits (537), Expect = 8.480e-58 Identity = 131/309 (42.39%), Postives = 166/309 (53.72%), Query Frame = 2 Query: 674 EAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGRDEPIVAA-GKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 E K RLR LG P+TLFGET QR RL AE D +++ L +GH++ N+F+G+ D DE V G+ D +KE+ + LV FF+ +L WE DL RPDHVKRT QGKL TKT KQ KDY+RPLFKLCK +++P IL NLV ++ F + GEFV+AND Y+ AIGNA WPIG+TMVGIHER+GRE+I++ AH+MNNEAQRKY+ SVKRL++Y Q + PSKKV Sbjct: 121 EMKRRLRDLGHPVTLFGETMRQRMQRLRRAEHDAASRREE-ELGEGHDIRNQFVGHQRDDDEHEGPSRDDVEDEATVPPEGRAGDSAAGLAAREDGTDDPHAVD---------------------------------------------EKELEDDVLVYRFFKSMLLRWEQDLADRPDHVKRTAQGKLATKTMKQCKDYIRPLFKLCKRRQVPADILPNLVEIVRFCRMGEFVRANDAYIRLAIGNAAWPIGVTMVGIHERTGREKINANKQAHVMNNEAQRKYITSVKRLISYAQS-IASVLPSKKV 382
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: A0A6U3R6S4_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R6S4_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.520e-57 Identity = 153/473 (32.35%), Postives = 219/473 (46.30%), Query Frame = 2 Query: 224 MDLLKAELERKKQQTSELVTKAGSNKGGRRFLRRGDVARLEKEEREKEQANLKRVRDEKXXXXXXXXXXXXXXXXXXXXXXXXXGKGSPLDQEPHEGTENDDSDITTIAKKTGTGEATDHVVAXXXXXXXXXXXXXXXXXXXXXEEVPEREAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLD---------------AATGRDEPIVAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 MD LKAE+ERK+++ EL+ S+ G ++F RR D+ E+ ERE ++ + ++ R D+ G E ++ + + T D + ++P E K+RLR + +T FGET A+R ARL E + ++DF ++ GH+ N FL D + LD + +G+ P +G DG K + + ++L++ +F+GL + WEMDLNAR + VKRT QGK+ETKTQKQ KDY+RPLFKLCK K +P IL NL ++ ++GEFV AND Y+ TAIGN+ WPIG+T+VGIH+RS + + VAH+MNNE QRKYL SVKRL+ Y Q +R D+ PSKKV Sbjct: 1 MDALKAEIERKRKRKEELLPHLASDTGPKKFFRRCDLEAAEQRERETKRQDFEKTRALNVRQH---------------------------DENRRGGAELNEQLLRRKGQSTSRSNLGDPAASAQDNGRDDPPLM----------DLPIDEVKIRLRDMNQVVTYFGETDAERLARLRKIEVEGVDQENDFAISGGHDTRNVFL---DQDSRSNALDDXXXXXXXXXTPKASSKSGKRAPNFTSGM--DGKALSTELALIDETPKKKPNKQERVALEEKERA---------------------------ATKEQQVVNDHRLIKDYFKGLTRSWEMDLNARSEQVKRTAQGKIETKTQKQCKDYIRPLFKLCKKKTVPADILFNLKKIMECCQKGEFVMANDAYIQTAIGNSAWPIGITLVGIHQRSAHDGLQVGKVAHVMNNEMQRKYLQSVKRLIAYEQKRRPDVAPSKKV 404
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: A0A5D6YA39_9STRA (Pre-mRNA-splicing factor 18 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YA39_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.620e-57 Identity = 135/318 (42.45%), Postives = 166/318 (52.20%), Query Frame = 2 Query: 662 VPEREAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGRDEPIVAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDK------EMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 +P E K RLR G PITLFGE+ R RL AE D Q+D L GH + F G +A DAA + G +A+ G D E +KLV FF+ L+ WE DL ARPDHVKRT QGK+ TKT KQ KDY+RPLFKLCK +++P IL NLV ++ F ++GEFV AND Y+ AIGNA WPIG+TMVGIHER+GRE+I+S AH+MNNEAQRKYL SVKRL++Y Q +++ PSKKV Sbjct: 109 LPWAEMKRRLREFGEPITLFGESARARVDRLRRAEHDAASWQED-ELEGGHRTRSRFAGEQAAQAAEHAEDAAGFEGDXXXXXXSG------------------------------GTQRAGGHGRDSAHGTSHHKRKAAKRAPTALDGDANDDDXDARDERDLDKLVYRFFKAKLQAWERDLAARPDHVKRTAQGKIATKTMKQCKDYIRPLFKLCKQRQVPPDILPNLVEIVRFCRQGEFVLANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNEAQRKYLTSVKRLVSYAQSV-SNVLPSKKV 394
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: W2QIM4_PHYPN (Pre-mRNA-splicing factor 18 n=7 Tax=Phytophthora TaxID=4783 RepID=W2QIM4_PHYPN) HSP 1 Score: 209 bits (531), Expect = 2.310e-57 Identity = 131/316 (41.46%), Postives = 170/316 (53.80%), Query Frame = 2 Query: 662 VPEREAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGRDEPI----VAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 +P + + RLR LG PITLFGE+ R RL E D + + L GH++ N F+G S + G D A E VA GD ++ D+E +K+V FF+G+L+ WE DL RPDHVKRT QGK+ KT KQ KDY+RPLFKLCKH+++P IL +LV ++ F ++GEFV AND Y+ AIGNA WPIG+TMVGIHER+GRE+I S AH+MNNE+QRKYL SVKRLM+Y Q +++ PSK+V Sbjct: 89 LPWPDLRRRLRELGEPITLFGESMKDRMTRLRRLEIDVVT-KHEVELGAGHDIRNRFVGGDSG-MNGEQKDTADDAAEXXXXFDVADTAGD------------------------------------------------------GKSKTDRKEEEDEEKDADKMVYRFFKGMLQRWEKDLANRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPPDILPHLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKIHSNKQAHVMNNESQRKYLTSVKRLMSYAQS-ISNVLPSKRV 347
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: A0A0W8DND4_PHYNI (Pre-mRNA-splicing factor 18 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DND4_PHYNI) HSP 1 Score: 209 bits (531), Expect = 2.370e-57 Identity = 131/316 (41.46%), Postives = 170/316 (53.80%), Query Frame = 2 Query: 662 VPEREAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGRDEPI----VAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 +P + + RLR LG PITLFGE+ R RL E D + + L GH++ N F+G S + G D A E VA GD ++ D+E +K+V FF+G+L+ WE DL RPDHVKRT QGK+ KT KQ KDY+RPLFKLCKH+++P IL +LV ++ F ++GEFV AND Y+ AIGNA WPIG+TMVGIHER+GRE+I S AH+MNNE+QRKYL SVKRLM+Y Q +++ PSK+V Sbjct: 90 LPWPDLRRRLRELGEPITLFGESMKDRMXRLRRLEIDXVT-KHEVELGAGHDIRNRFVGGDSG-MNGEQKDTADDAAEXXXXFDVADTAGD------------------------------------------------------GKSKTDRKEEEDEEKDADKMVYRFFKGMLQRWEKDLANRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKHRQVPPDILPHLVDIVKFCRQGEFVMANDAYIKLAIGNAAWPIGVTMVGIHERTGREKIHSNKQAHVMNNESQRKYLTSVKRLMSYAQS-ISNVLPSKRV 348
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Match: M4BLQ0_HYAAE (Pre-mRNA-splicing factor 18 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLQ0_HYAAE) HSP 1 Score: 208 bits (530), Expect = 3.890e-57 Identity = 132/308 (42.86%), Postives = 166/308 (53.90%), Query Frame = 2 Query: 674 EAKMRLRSLGLPITLFGETHAQRTARLLSAEEDKGHHQDDFTLTDGHNVNNEFLGNVSADLTGSHLDAATGRDEPIVAAGKGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAVMGQKPDKEMPRNKLVRSFFRGLLKEWEMDLNARPDHVKRTVQGKLETKTQKQAKDYMRPLFKLCKHKELPDGILNNLVTMINFMKEGEFVKANDVYLLTAIGNAPWPIGLTMVGIHERSGRERISSKNVAHIMNNEAQRKYLVSVKRLMTYLQDKRTDIPPSKKV 1597 + + RLR LG PITLFGE+ R RL E D DD L GH + N F+G D DAA +E + XXXXX + +K+V FF+G+L WE DL +RPDHVKRT QGK+ KT KQ KDY+RPLFKLCK +++P IL NLV ++ F ++GEFV AND Y+ AIGNA WPIG+TMVGIHER+GRE+I+S AH+MNNE+QRKYL SVKRLM+Y Q +++PPSK+V Sbjct: 99 DLRRRLRELGEPITLFGESLLDRMTRLRHVEMDAATKHDD-DLGAGHGIRNRFVGGEEGDQREEADDAAEDAEEFEASV--------------------------------------------------ETRRKSXXXXXDDLXXXXXXXXXDADKMVYRFFKGMLHGWEKDLASRPDHVKRTAQGKIAVKTMKQCKDYIRPLFKLCKQRQVPPDILLNLVAIVKFCRQGEFVLANDAYIKLAIGNAAWPIGVTMVGIHERTGREKINSNKQAHVMNNESQRKYLTSVKRLMSYAQSV-SNVPPSKRV 354 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9458.17204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9458.17204.1 >prot_H-paniculata_contig9458.17204.1 ID=prot_H-paniculata_contig9458.17204.1|Name=mRNA_H-paniculata_contig9458.17204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=460bp MDLLKAELERKKQQTSELVTKAGSNKGGRRFLRRGDVARLEKEEREKEQAback to top mRNA from alignment at H-paniculata_contig9458:866..5377- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9458.17204.1 ID=mRNA_H-paniculata_contig9458.17204.1|Name=mRNA_H-paniculata_contig9458.17204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4512bp|location=Sequence derived from alignment at H-paniculata_contig9458:866..5377- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9458:866..5377- >mRNA_H-paniculata_contig9458.17204.1 ID=mRNA_H-paniculata_contig9458.17204.1|Name=mRNA_H-paniculata_contig9458.17204.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at H-paniculata_contig9458:866..5377- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |