mRNA_H-paniculata_contig9456.17202.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: D7FXI7_ECTSI (Aldolase_II domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI7_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 1.140e-143 Identity = 200/251 (79.68%), Postives = 221/251 (88.05%), Query Frame = 1 Query: 1 AWYLDAPENEASETLLKELGIVLYQVHVK-GSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDPRELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHPWEQRSGTR 750 AWYLDAPENEAS TLL ELGIV Y VH++ GS D+N+QLWKLAQARL +H+KSG D D+GAIQIGDLP+TAF HD+MEDQGGEARFD LEGMYCVWGGEAFVDVRDW DCWVRVRL+ GDVVLIPPN FHRATPK+PGARLVQVR+KTG+GGVNV+IRDPRT PAPGSSGT+ GDPRELVASLCRQFY LGWVTGTGGSISIR HGNR+FMTPSGVQKERL+ SDLF+LD+QG +L P RSG + Sbjct: 25 AWYLDAPENEASPTLLAELGIVDYAVHLENGSPDVNIQLWKLAQARLAMHSKSGGDAIDKGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWVDCWVRVRLQPGDVVLIPPNRFHRATPKTPGARLVQVRVKTGDGGVNVEIRDPRTTPAPGSSGTLAGDPRELVASLCRQFYDLGWVTGTGGSISIR----HGNRVFMTPSGVQKERLKPSDLFILDRQGLVLARP-STRSGAK 270
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A6H5JCG2_9PHAE (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG2_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 3.880e-137 Identity = 199/251 (79.28%), Postives = 222/251 (88.45%), Query Frame = 1 Query: 1 AWYLDAPENEASETLLKELGIVLYQVHVK-GSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDPRELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHPWEQRSGTR 750 AWYLDAPENEAS TLL ELGIV Y VH++ GS D+N+QLWKLAQARL +H+KSG D +GAIQIGDLP+TAF HD+MEDQGGEARFD LEGMYCVWGGEAFVDVRDWADCWVRVRL+ G+VVLIPPN FHRATPK+PGARL+QVR+KTG+GGVNV+IRDPRT PAPGSSGT+ GDPRELVASLCRQFY LGWVTGTGGSISIR HGNR+FMTPSGVQKERL+ SDLF+LD+QG +L PW RSG + Sbjct: 33 AWYLDAPENEASPTLLAELGIVEYAVHLENGSPDVNIQLWKLAQARLAMHSKSGGDAMGKGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWADCWVRVRLQPGEVVLIPPNRFHRATPKTPGARLMQVRVKTGDGGVNVEIRDPRTTPAPGSSGTLAGDPRELVASLCRQFYDLGWVTGTGGSISIR----HGNRVFMTPSGVQKERLKPSDLFILDRQGHVLARPWT-RSGAK 278
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A7S3XX92_HETAK (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX92_HETAK) HSP 1 Score: 136 bits (343), Expect = 3.440e-34 Identity = 91/244 (37.30%), Postives = 126/244 (51.64%), Query Frame = 1 Query: 4 WYLDAPENEASETLLKELGIVLYQVHVKGSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRAT-PKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDP--RELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHP 726 WYLD P+ AS+ +L ELGI ++ + E + LA L L + A + ++G PS + + + G E + + +Y V G F+DVRD AD W+R+ L + +++LIPP ++ R + L DPR T P R LV LC++FY LGWVTGTGGSIS+R +GNRI+MTPSGVQKER+ DLFVLD +G +L HP Sbjct: 20 WYLDNPDEPASKAILAELGIKVWDDYSDEDELKGI----LALENLTLKSSKYALSPE----ELG--PS---FEEYVAEMGKEHKISG-DVVYRVVSGSIFIDVRDDADEWIRILLARSELILIPPTVYRREILTEQQYIELESYESPNKGAARTAREEDPRV--------THLSHPYTRHLVVDLCKEFYDLGWVTGTGGSISVR----YGNRIYMTPSGVQKERMTPEDLFVLDLEGRVLSHP 237
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: H3GCA5_PHYRM (Aldolase_II domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCA5_PHYRM) HSP 1 Score: 118 bits (296), Expect = 8.670e-27 Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 1 Query: 262 ALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDP-RELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHP 726 A++ +Y + G A++DVRD ADCWVR L +G V + + R P S A VQ+ +++ +G ++ R R A A S + + RELV LCR +Y W+TGTGG++S+R HG RI++TPSGV KERL+ DL+VLD GGIL P Sbjct: 65 AVDVVYNIVKGRAYLDVRDSADCWVRCTLTEGMRVALSSHTLRRFVPVSSSA--VQL-LESSSGARSLTPRYTRPADAASHSTLLDANKCRELVCELCRLYYSTEWMTGTGGAMSLR----HGERIYVTPSGVPKERLQPKDLYVLDMDGGILSSP 213
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A4D9D244_9STRA (Probable methylthioribulose-1-phosphate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D244_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.370e-26 Identity = 87/275 (31.64%), Postives = 125/275 (45.45%), Query Frame = 1 Query: 1 AWYLDAPENEASETLLKELGIVLYQVHVKGSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGM--YCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARL---VQVRIKTGNG-------------GVNVDIRDPRTAPAPGSSGTMP---------GDPRELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHPWEQRSG 744 AWYL+ P + +L+ELG + + A G D AI +L A D +++ G E A+ + + V G+ ++DVRD AD W+RV L + D + +P +++ R P + + + R NG G ++ R A M G ++L+ LCRQFY LGWVTGTGGSISIR GNR+FMTPSGVQKER+ +L++LD +G L P E + G Sbjct: 3 AWYLNDPHQACTPAILEELGACVGKA---------------------FEADKGPDTLFLTAISEKEL--RAAFADTLKEFGREHCMGAVSEVQDFNVVDGQVYIDVRDSADAWIRVLLFKEDRLTLPSSVWRRLLPTTEDTHVDVAIASRPDPSNGVSKGARNGAGRKEGSAFSVKTYRFASPADERQAMAVWTQRRGQDGGTQQLIVDLCRQFYDLGWVTGTGGSISIRE----GNRVFMTPSGVQKERILPEELYILDMRGNHLYVPPESQPG 250
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A3F2RW29_9STRA (Multifunctional fusion protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RW29_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.960e-24 Identity = 79/241 (32.78%), Postives = 109/241 (45.23%), Query Frame = 1 Query: 7 YLDAPENEASETLLKELGIVLYQVHVKGSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDP-RELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHP 726 YLD P + AS +L+E+G+ + L ++ +L S + G +Y V G F+DVRD ADCWVR L +G V + R G VQ+ ++ NG ++ R R A + + D RELV LCRQ+Y W+TGTGG++S+R HG RI++TPSGV KERL+ DL+VLD G IL P Sbjct: 713 YLDTPSDRASLAILREIGVSIADSSSSSPSSKEGSLVDVSSDEVLQSEHSSSTGI----------------------------------VYKVVKGGVFLDVRDSADCWVRCSLTEGMKVTLGMRTLRRFV--LVGGNCVQL-MENSNGLRSLTARYTRPADSESLNALGGADECRELVCELCRQYYTTEWMTGTGGAMSLR----HGERIYVTPSGVPKERLQPEDLYVLDLDGAILSSP 912
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A3R7H3A5_9STRA (Multifunctional fusion protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H3A5_9STRA) HSP 1 Score: 110 bits (276), Expect = 4.240e-24 Identity = 79/241 (32.78%), Postives = 108/241 (44.81%), Query Frame = 1 Query: 7 YLDAPENEASETLLKELGIVLYQVHVKGSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDP-RELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHP 726 YLD P + AS +L+E+G+ + L ++ +L S + G Y V G F+DVRD ADCWVR L +G V + R G VQ+ ++ NG ++ R R A + + D RELV LCRQ+Y W+TGTGG++S+R HG RI++TPSGV KERL+ DL+VLD G IL P Sbjct: 17 YLDTPSDRASLAILREIGVSIADSSSSSPSSKEGSLVDVSSDEVLQSEHSSSTGI----------------------------------TYKVVKGGVFLDVRDSADCWVRCSLTEGMKVTLGMRTLRRFV--LVGGNCVQL-MENSNGLRSLTARYTRPADSESLNALGGADECRELVCELCRQYYTTEWMTGTGGAMSLR----HGERIYVTPSGVPKERLQPEDLYVLDLNGAILSSP 216
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: K3WWJ7_GLOUD (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWJ7_GLOUD) HSP 1 Score: 110 bits (275), Expect = 5.910e-24 Identity = 66/160 (41.25%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 277 YCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGA--RLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDPRELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHPWEQRSGTR 750 Y + G F+DVRD D W+R+ L G V + + HR P + A V G + R + P+ REL+ LCRQFY GWVTGTGGSISIR GNRI+MTPSGVQKER++ +L++LD G IL P +Q+ G + Sbjct: 76 YVLKSGRVFLDVRDSGDSWIRILLNAGTPVTLAAGVLHRFVPDATYAPHHAVTATESVAEGDRCLVARFDK--PSDAIQTMQYHKYRELICELCRQFYQAGWVTGTGGSISIR----FGNRIYMTPSGVQKERIQPDELYLLDIDGAILNAP-KQKPGQK 228
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A6G0SPN2_9STRA (Probable methylthioribulose-1-phosphate dehydratase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SPN2_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.670e-23 Identity = 77/241 (31.95%), Postives = 112/241 (46.47%), Query Frame = 1 Query: 7 YLDAPENEASETLLKELGIVLYQVHVKGSEDMNVQLWKLAQARLLLHAKSGADGADRGAIQIGDLPSTAFIHDNMEDQGGEARFDALEGMYCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDP-RELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHP 726 YLD+P + AS +L+E+G+ + + S + ++ D A A+Q + S A + Y V G +D+RD ADCWVR L +G + R P + A + + + ++ R R A A S + + RELV LCR +Y W+TGTGG++S+R HG RI++TPSGV KERL+ DL+VLD GGIL P Sbjct: 15 YLDSPSDRASLAVLREIGVSVAEFSPSSSLEKE---------------ETAVDVATDAALQ-NEHSSAANVE------------------YKVVKGRVHLDMRDSADCWVRCTLTEGMKASLSLRALRRFVPIAGNAAQL---VDSSKAARSLTARYTRPADAASHSTLVDANECRELVCELCRLYYTTEWMTGTGGAMSLR----HGERIYVTPSGVPKERLQPEDLYVLDLDGGILSSP 214
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Match: A0A8K1FFG3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFG3_PYTOL) HSP 1 Score: 107 bits (266), Expect = 9.280e-23 Identity = 67/158 (42.41%), Postives = 83/158 (52.53%), Query Frame = 1 Query: 277 YCVWGGEAFVDVRDWADCWVRVRLRQGDVVLIPPNMFHRATPKSPGARLVQVRIKTGNGGVNVDIRDPRTAPAPGSSGTMPGDPRELVASLCRQFYHLGWVTGTGGSISIRRANGHGNRIFMTPSGVQKERLRASDLFVLDQQGGILQHPWEQRSGTR 750 Y V G F+DVRD D W+R L G V + F R VQV + + R + + A REL+ LCRQFY GWVTGTGGSISIR +GNRI+MTPSGVQKER+ DL++LD G IL P +Q+ G + Sbjct: 67 YVVTSGRVFLDVRDAGDAWIRSLLTPGVQVSLVHTTFRRFVLDHTLPADVQVAVLPVTKSGELIPRFNKASDA--LEVVQYHKYRELICELCRQFYEAGWVTGTGGSISIR----YGNRIYMTPSGVQKERIEPDDLYMLDLDGAILDAP-QQKPGKK 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9456.17202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9456.17202.1 >prot_H-paniculata_contig9456.17202.1 ID=prot_H-paniculata_contig9456.17202.1|Name=mRNA_H-paniculata_contig9456.17202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp AWYLDAPENEASETLLKELGIVLYQVHVKGSEDMNVQLWKLAQARLLLHAback to top mRNA from alignment at H-paniculata_contig9456:5221..9424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9456.17202.1 ID=mRNA_H-paniculata_contig9456.17202.1|Name=mRNA_H-paniculata_contig9456.17202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4204bp|location=Sequence derived from alignment at H-paniculata_contig9456:5221..9424+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9456:5221..9424+ >mRNA_H-paniculata_contig9456.17202.1 ID=mRNA_H-paniculata_contig9456.17202.1|Name=mRNA_H-paniculata_contig9456.17202.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig9456:5221..9424+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |