mRNA_H-paniculata_contig9455.17200.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A6H5KZ38_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ38_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.140e-47 Identity = 91/152 (59.87%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 1 TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMEQDKNIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALTCVTLVVG 456 TNYLLEKSRVTGQA GERCFHVMHYLL G S +E+ ++ LL ++Y YLM++D++I G++DG+EF NLK SMS V I DQ H F LL GVLA GN+ F DHGDG ATV+++P AL+R + CLGVD ALE+ALT VTL VG Sbjct: 240 TNYLLEKSRVTGQAPGERCFHVMHYLLEGTSARERSEYRLLPANEYAYLMKKDRSIRGIDDGKEFINLKASMSRVDIHPKDQSHLFPLLAGVLAAGNICFEDHGDGNAATVMQTPDK-------ALARTAGCLGVDPAALEAALTSVTLQVG 384
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A7S0SGA7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGA7_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 9.530e-19 Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 1 Query: 7 YLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLL-SPSDYVYLMEQD-KNIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALTCVTLVVG 456 YLLEKSRVT QA GER +HV + L GA+ +E+E+F +L + DY Y+ I GVND E+ LK ++ AVGI + D F ++ V+ GNVSF + DG A + G +AL +K LG E LE +L ++ G Sbjct: 247 YLLEKSRVTAQAEGERGYHVFYQLCMGATPQEREEFNILKNVGDYKYMSNSACVAIQGVNDALEYRELKTALGAVGISKEDIHEIFRVVASVMWLGNVSFVEDEDGDNAAAVSCT------GKEALETSAKLLGTTPEMLEKSLVTRKIIAG 392
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A662X183_9STRA (Myosin motor domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X183_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.860e-18 Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 4 NYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLL-SPSDYVYLMEQDKNIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFN---DHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 NYLLE+SRV QA GER FH + ++ GA+ E+E + L S ++ L +D I GV+D + + N++ +M+AVGI + +Q F L +L GNV+F D RA I +P + AL++ + LGV+AE LE+ LT Sbjct: 198 NYLLERSRVIRQAEGERNFHAFYQMMSGATAAEREAWQLPESAEEFDVLSNEDAKIEGVDDAENYVNVRQNMTAVGISDDEQRQIFQQLAAILWLGNVAFKETTDEAHNPRA-AIETPEARE-----ALAKAASLLGVEAEKLEALLT 339
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A662YAB1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAB1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.530e-17 Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 4 NYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLL-SPSDYVYLMEQDKNIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFN---DHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 NYLLE+SRV QA GER FH + ++ GA+ E+E + L S ++ L +D I GV+D + + N++ +M+AVGI + +Q F L +L GNV+F D RA I +P + AL++ + LGV+AE LE+ LT Sbjct: 198 NYLLERSRVIRQAEGERNFHAFYQMMAGATAAEREAWQLPESAEEFDVLSNEDAKIEGVDDAENYVNVRQNMTAVGISDEEQRQIFQQLAAILWLGNVAFKETTDEAHNPRA-AIETPEARE-----ALAKAASLLGVEAEKLEALLT 339
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A671SX59_9TELE (Unconventional myosin-Ie-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671SX59_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 2.650e-17 Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMEQDK-NIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 +N+LLEKSRV Q HGER FH+ + LL GA+ +++E+ +++P Y+YL + D + VND +EF + +MS VG+ Q ++ G+L GN++F + G+ V+ S D L+ S LG++ + L+S LT Sbjct: 188 SNFLLEKSRVVSQNHGERNFHIYYQLLQGATKEQRENLGIITPDYYLYLNQSDTYTVEDVNDKKEFKDTMAAMSVVGLSLDAQDTVLQIVAGILHLGNIAFREEGN---YAVVESE--------DFLAFPSYLLGINQDGLKSKLT 322
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A671SY37_9TELE (Unconventional myosin-Ie-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671SY37_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 2.740e-17 Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMEQDK-NIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 +N+LLEKSRV Q HGER FH+ + LL GA+ +++E+ +++P Y+YL + D + VND +EF + +MS VG+ Q ++ G+L GN++F + G+ V+ S D L+ S LG++ + L+S LT Sbjct: 188 SNFLLEKSRVVSQNHGERNFHIYYQLLQGATKEQRENLGIITPDYYLYLNQSDTYTVEDVNDKKEFKDTMAAMSVVGLSLDAQDTVLQIVAGILHLGNIAFREEGN---YAVVESE--------DFLAFPSYLLGINQDGLKSKLT 322
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A671SX38_9TELE (Unconventional myosin-Ie-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671SX38_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 2.850e-17 Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMEQDK-NIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 +N+LLEKSRV Q HGER FH+ + LL GA+ +++E+ +++P Y+YL + D + VND +EF + +MS VG+ Q ++ G+L GN++F + G+ V+ S D L+ S LG++ + L+S LT Sbjct: 188 SNFLLEKSRVVSQNHGERNFHIYYQLLQGATKEQRENLGIITPDYYLYLNQSDTYTVEDVNDKKEFKDTMAAMSVVGLSLDAQDTVLQIVAGILHLGNIAFREEGN---YAVVESE--------DFLAFPSYLLGINQDGLKSKLT 322
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A671SXX3_9TELE (Unconventional myosin-Ie-like n=30 Tax=Cyprininae TaxID=2743694 RepID=A0A671SXX3_9TELE) HSP 1 Score: 87.8 bits (216), Expect = 2.850e-17 Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 1 TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMEQDK-NIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 +N+LLEKSRV Q HGER FH+ + LL GA+ +++E+ +++P Y+YL + D + VND +EF + +MS VG+ Q ++ G+L GN++F + G+ V+ S D L+ S LG++ + L+S LT Sbjct: 188 SNFLLEKSRVVSQNHGERNFHIYYQLLQGATKEQRENLGIITPDYYLYLNQSDTYTVEDVNDKKEFKDTMAAMSVVGLSLDAQDTVLQIVAGILHLGNIAFREEGN---YAVVESE--------DFLAFPSYLLGINQDGLKSKLT 322
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A3F2RTY1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTY1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.280e-17 Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 4 NYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLL-SPSDYVYLMEQDKNIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFN---DHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 NYLLE+SRV QA GER FH + L+ GA+ EKE + L S ++ L +D I GV+D + + N++ +M+AVGI + +Q F L +L GNV F D RA I +P ++ AL++ + +G+D + LE+ LT Sbjct: 198 NYLLERSRVIRQAEGERNFHSFYQLMSGATAAEKEAWKLPESAEEFDVLGNEDATIEGVDDAENYKNVRQNMTAVGITDEEQHAIFQQLSAILWLGNVQFKETTDEAHNPRA-AIDTPEAHE-----ALAKAADLMGIDKDKLEALLT 339
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Match: A0A673LKR7_9TELE (Unconventional myosin-Ie-like n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673LKR7_9TELE) HSP 1 Score: 86.7 bits (213), Expect = 6.920e-17 Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 1 Query: 1 TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMEQDK-NIPGVNDGQEFDNLKYSMSAVGIDETDQFHAFSLLGGVLATGNVSFNDHGDGKRATVIRSPSVYDDDGGDALSRVSKCLGVDAEALESALT 435 +N+LLEKSRV Q HGER FH+ + LL GA+ +++E+ + +P Y YL + D + VND +EF++ +MS VG+ Q ++ G+L GN++F + G+ V+ S D L+ S LG++ + L+S LT Sbjct: 170 SNFLLEKSRVVSQNHGERNFHIYYQLLQGATKEQRENLGVTTPDYYFYLNQSDTYTVEDVNDKKEFEDTMAAMSVVGLSLDAQDTVLQIVAGILHLGNITFREEGN---YAVVESE--------DFLAFPSYLLGINQDGLKSKLT 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9455.17200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9455.17200.1 >prot_H-paniculata_contig9455.17200.1 ID=prot_H-paniculata_contig9455.17200.1|Name=mRNA_H-paniculata_contig9455.17200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp TNYLLEKSRVTGQAHGERCFHVMHYLLHGASDKEKEDFCLLSPSDYVYLMback to top mRNA from alignment at H-paniculata_contig9455:1923..4516+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9455.17200.1 ID=mRNA_H-paniculata_contig9455.17200.1|Name=mRNA_H-paniculata_contig9455.17200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2594bp|location=Sequence derived from alignment at H-paniculata_contig9455:1923..4516+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9455:1923..4516+ >mRNA_H-paniculata_contig9455.17200.1 ID=mRNA_H-paniculata_contig9455.17200.1|Name=mRNA_H-paniculata_contig9455.17200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at H-paniculata_contig9455:1923..4516+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |