mRNA_H-paniculata_contig9446.17197.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: A0A6H5JTA2_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTA2_9PHAE) HSP 1 Score: 215 bits (548), Expect = 5.040e-62 Identity = 118/233 (50.64%), Postives = 150/233 (64.38%), Query Frame = 2 Query: 59 AGVM--AAGAKAEVPP-----TGTDKVGWDEGEXXXXXXXAPVVEGV-VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKKPQPSSLALIFAAILTLLALLSLTISSSPASKSRPDARPKID 733
AGV+ AA A AE+P D +G EGE P + G V++LTD +FER+TQ STGATTGDWFV+FYAPWCGHC+KL+ W ELA+KLGG+VN+ KVD TANR + KRFGV FPTLL FSHG ++KF G RKLD+ + +AKGGF K + VP P L G LK LL + KDL G+ GK P ++ ++ ++L LL L ++T+S P P R K D
Sbjct: 41 AGVVDGAAAAAAEIPQEPKMDADEDGMGGAEGEEE------PTIPGATVQVLTDGDFERITQASTGATTGDWFVEFYAPWCGHCRKLDGTWTELAEKLGGEVNVGKVDATANRGLVKRFGVKGFPTLLFFSHGNLHKFAGPRKLDSFIEFAKGGFKKTDSVPVPAPPSLAGGLKGLLTSVLKDLEGVKDGKMPSQMTIMVLVGSLLLLLVLFAITLSKPPPQA--PSKRAKAD 265
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: A0A836CGC7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC7_9STRA) HSP 1 Score: 177 bits (448), Expect = 5.750e-48 Identity = 88/152 (57.89%), Postives = 109/152 (71.71%), Query Frame = 2 Query: 179 VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGK-VNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKKPQPSSLA 631
V +LT++NFE LTQ STGATTGDWFVK YAPWCGHCK+LEP WDELA + + VN+AKVDVTANR VG+RFGV FPTLL+ G+ Y + G R L+ L +A GG++ E VP PR G+L LL+ ++KDLA +P GK P +LA
Sbjct: 41 VVLLTEQNFEHLTQASTGATTGDWFVKLYAPWCGHCKRLEPTWDELAAAVAARGVNVAKVDVTANRRVGERFGVRGFPTLLLLHAGRAYTYRGPRTLEKLTEFAAGGYAAAESVPVPPPRG--GALAALLSTVRKDLAAVPQGKVPSFPTLA 190
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: A0A7S2WDG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDG4_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.140e-42 Identity = 76/130 (58.46%), Postives = 97/130 (74.62%), Query Frame = 2 Query: 170 EGVVEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRV-VPKPRDLMGSLK 556
E V +LT +NFE TQ STGATTGDWFVKFYAPWCGHCKKL P+WDELA +L G VN+AKVD A+ ++ KRF + +PTL+ FS G++YK+ R L++L+A+AKGG+ D V VP P DL+ +LK
Sbjct: 27 ESDVVVLTSQNFEHDTQASTGATTGDWFVKFYAPWCGHCKKLAPVWDELATELKGVVNVAKVDAEAHSSLRKRFRIRGYPTLIFFSQGKMYKYEEKRSLESLVAFAKGGYKDDTEAVDVPAPPDLIATLK 156
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: A0A662WNR8_9STRA (Thioredoxin domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WNR8_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.030e-41 Identity = 77/144 (53.47%), Postives = 97/144 (67.36%), Query Frame = 2 Query: 179 VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKK 610
V +LT FE LTQ +GATTGDW V+FYAPWCGHCKKL P++++LA +L G+VN+AKVDVTAN +GKRF + FPT++ FSHGQ YKF G R L L A+A+GGF K E V ++ + LKKD + A KK
Sbjct: 47 VVVLTTSTFESLTQAGSGATTGDWLVEFYAPWCGHCKKLAPVYEKLADELKGEVNVAKVDVTANSELGKRFEIRGFPTIVHFSHGQAYKFAGKRTLPDLAAFARGGFEKVEGTAVSTAPSVLDQATQYVTDLKKDFITLLATKK 190
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: K3WL54_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL54_GLOUD) HSP 1 Score: 158 bits (400), Expect = 2.840e-41 Identity = 74/147 (50.34%), Postives = 97/147 (65.99%), Query Frame = 2 Query: 170 EGVVEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKK 610
E V +L +ENFE LTQ +TGATTGDW V+FYAPWCGHCK+L P+W+ELA +L G VN+AKVDVT N +GKRFG+ FPTLL GQVYK+ GAR ++ L +A+ G+ VP + + V+++D + A KK
Sbjct: 33 ESNVVVLNEENFEHLTQAATGATTGDWLVEFYAPWCGHCKRLAPVWEELADELKGTVNVAKVDVTENSELGKRFGIRGFPTLLFLRQGQVYKYSGARTVEELSRFARSGYKTIVSESVPALPTFANAALQHIKVIQEDFVSLLATKK 179
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: A0A8K1C713_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C713_PYTOL) HSP 1 Score: 158 bits (399), Expect = 3.110e-41 Identity = 72/144 (50.00%), Postives = 102/144 (70.83%), Query Frame = 2 Query: 179 VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKK 610
V ILT++NFE LTQ STGATTGDW V+FYAPWCGHCKKLEP+++++A +L GKVN+AKVD TA+ A+GKRF + +PT+L+ G VYK+ G R + L +A+ G+ VP P L+ ++K + ++++D + A KK
Sbjct: 27 VIILTNDNFEHLTQASTGATTGDWLVEFYAPWCGHCKKLEPVYEKVADELKGKVNVAKVDATAHSALGKRFEIQGYPTILLLRQGTVYKYSGPRTTEELSRFARSGYKTLVGHPVPTPSSLLKTVKHHVQLIQQDFVSLMATKK 170
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: U6LL83_9EIME (Thioredoxin, putative n=1 Tax=Eimeria brunetti TaxID=51314 RepID=U6LL83_9EIME) HSP 1 Score: 159 bits (401), Expect = 4.100e-41 Identity = 68/130 (52.31%), Postives = 94/130 (72.31%), Query Frame = 2 Query: 170 EGVVEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKD 559
E V++LTD NFE+ TQ TG+T+GDWFVKFYAPWCGHC+K+ P W+ELA+KL G++N+A +D TAN +RFG+ FPTLL F +GQ+Y + G+R +D L A+A GG+ K + +P + S+KD
Sbjct: 52 ESAVQVLTDANFEQETQAVTGSTSGDWFVKFYAPWCGHCRKMAPAWEELARKLKGRINVAHLDATANPQTARRFGIRGFPTLLFFKNGQMYSYQGSRAVDDLYAFATGGWEKTTAKPIPPVLSWLDSMKD 181
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: H3G8D9_PHYRM (Thioredoxin domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8D9_PHYRM) HSP 1 Score: 157 bits (397), Expect = 5.010e-41 Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 2 Query: 179 VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKK 610
V +L+ +FE TQ +GATTGDW V+FYAPWCGHCKKLEP+++ +A L G+VN+AKVDVTAN +GKRFG+ FPT+L FSHG+ YKF G R L+ L A+A+GGF E VV L+ K +K D + A KK
Sbjct: 23 VVVLSTSDFEHKTQAGSGATTGDWLVEFYAPWCGHCKKLEPIYETVANDLKGEVNVAKVDVTANSELGKRFGIRGFPTVLHFSHGKSYKFAGKRTLEELSAFARGGFKSVEGEVVSGAPSLVDFAKQQALDIKHDFVTLLATKK 166
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: D0MU36_PHYIT (Protein disulfide-isomerase, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MU36_PHYIT) HSP 1 Score: 156 bits (394), Expect = 1.640e-40 Identity = 74/144 (51.39%), Postives = 100/144 (69.44%), Query Frame = 2 Query: 179 VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKK 610
V +L++++FE TQ +GATTGDW V+FYAPWCGHCKKL P+++++A +L G+VN+AKVDVTAN +GKRFG+ FPTLL FSHG+ YK+ G R L+ L +A+GGF K E VV L+ +K+D + A KK
Sbjct: 30 VIVLSNDDFEHKTQAGSGATTGDWLVEFYAPWCGHCKKLVPIYEKVASELKGQVNVAKVDVTANAELGKRFGIRGFPTLLHFSHGKSYKYSGKRTLEDLAEFARGGFKKVEGEVVNAAPSLLDFAVQQAEDVKRDFITLLATKK 173
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Match: A0A3F2REI5_9STRA (Thioredoxin domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2REI5_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.160e-40 Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 2 Query: 179 VEILTDENFERLTQVSTGATTGDWFVKFYAPWCGHCKKLEPLWDELAKKLGGKVNIAKVDVTANRAVGKRFGVNRFPTLLMFSHGQVYKFGGARKLDALMAYAKGGFSKDEPRVVPKPRDLMGSLKDLLNVLKKDLAGIPAGKK 610
V +LT +FE TQ +GATTGDW V+FYAPWCGHCKKL P+++++A L G+VN+AKVDVT N +GKRFG+ FPT+L FSHG+ YKF G R L+ L +A+GGF E VV + +K+ +KKD + A KK
Sbjct: 30 VVVLTSSDFEAKTQAGSGATTGDWLVEFYAPWCGHCKKLAPIYEKVANDLKGEVNVAKVDVTDNAELGKRFGIRGFPTVLHFSHGKSYKFAGKRTLEDLSVFARGGFKSVEATVVAAAPSYLDFVKEQALDVKKDFVTLLATKK 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9446.17197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9446.17197.1 >prot_H-paniculata_contig9446.17197.1 ID=prot_H-paniculata_contig9446.17197.1|Name=mRNA_H-paniculata_contig9446.17197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp MAAGAKAEVPPTGTDKVGWDEGEGEDEDEDAPVVEGVVEILTDENFERLTback to top mRNA from alignment at H-paniculata_contig9446:642..7327+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9446.17197.1 ID=mRNA_H-paniculata_contig9446.17197.1|Name=mRNA_H-paniculata_contig9446.17197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6686bp|location=Sequence derived from alignment at H-paniculata_contig9446:642..7327+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9446:642..7327+ >mRNA_H-paniculata_contig9446.17197.1 ID=mRNA_H-paniculata_contig9446.17197.1|Name=mRNA_H-paniculata_contig9446.17197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig9446:642..7327+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |