mRNA_H-paniculata_contig9432.17187.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI) HSP 1 Score: 436 bits (1120), Expect = 5.310e-145 Identity = 221/330 (66.97%), Postives = 265/330 (80.30%), Query Frame = 2 Query: 194 RDFWILVSFLLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAA-TTPNGNQTEGASSAEPVRLVKLNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLTGGAESGSNAGVAVAPVSRESVKAKSKASKKAD 1180
R+FW+L S+LLVALRRALTV WIR+NKF+ DW IR +DFRHKVVLIGDGF EG+GDWVVMGG AG+TR L+++A +D+KVR W IINRGR+G+ S+DWLPSD KSLY +KV S ACRDAEIFVV+LGTMDV+ +CVGMPV+A+RKTA D F E E C +VKN+REIC+ LRAEGKKVVVCNVMTSGAGINRR G AKR+NRQL+LY + ATATATA T P G Q PV +VK+NNPR+ R+DGRAFDGLHLNA+GYRAFAS +YEV+GPMM+A EW++WK L G +G+ G AVAP+S E + KSK++KKAD
Sbjct: 4 REFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGK---ATATATAKGETAPKGGQ--------PVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGAG-GAAVAPISGEGFEPKSKSNKKAD 321
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.610e-34 Identity = 95/295 (32.20%), Postives = 143/295 (48.47%), Query Frame = 2 Query: 209 LVSFLLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRD-AETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRLVK-LNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLTG 1087
+V ++ VA+R W+RL ++ + I ++FRHK+V+IGDGF G GDWV M GL R + + A+ + KVR +W++INRG T S+ W P+ +Q RDA+I +V +G+MD P Q+V NI+ IC+ LR +GK+V + + S + + + + N+QL Y N+T G PV++ L+ P R D +AFDG H N+K Y+ A + VL PM+ A EW WK+ L G
Sbjct: 4 VVLYIYVAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMDSKRSPPIPP-----------------SQTVTNIQSICDALRKKGKRVCIGTLCHSD--VEAQNEIHRATNKQLLEYC------------------NETSGDDL--PVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQLDG 259
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.290e-33 Identity = 89/290 (30.69%), Postives = 146/290 (50.34%), Query Frame = 2 Query: 221 LLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRLVK-LNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLTG 1087
L VA+R + W+R ++ + + +++ HK+V+IGDGF G GDW+ M GL+ + + +DK+R +W++INRG T S+ W P+ +Q + + RDA++ +V +G+MD A RKT S ++T ++NI+ IC+ LR +GK+V V ++ S + + +N+ L + ++ A+ A PV++ L+ P R D +AFDG H NAK Y+ A D VL P++ A EW WK+ L G
Sbjct: 4 LYVAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTPS--ISPDQT---LRNIQAICDALRKKGKRVCVGSLCHSD--VVTECDGHRSINQALVDFCAST--------------------ATDAFPVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQLDG 255
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.430e-33 Identity = 91/294 (30.95%), Postives = 144/294 (48.98%), Query Frame = 2 Query: 209 LVSFLLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRLVK-LNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLTG 1087
LV ++ VA+R A W+R ++++ + ++++HK+V+IGDGF G GDW+ M GL++ L ++ +DK+R RW++INRG T S+ W P+ +Q RDA+I +V +G++D + S E+T V NI+ IC+ LR +GK+V V ++ A + + N+ L Y +++ PV+L L+ P R D +AFDG H NAK Y+ A D VL P++ A EW WK+ L G
Sbjct: 4 LVLYVYVAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-------------SRRKNPSISPEQT---VCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCESTKMDDL--------------------PVKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQLEG 259
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.060e-31 Identity = 85/294 (28.91%), Postives = 141/294 (47.96%), Query Frame = 2 Query: 218 FLLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVV---CNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRLVK-LNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLTG 1087
++ V +R W+R ++++ + ++F HK+V+IGDGF G GDWV M GL + + ++ + K+R +W++INRG + SADW P+ + +Q +R RDAE+ +V +G++D+ +P A +++KNI+ IC+ L +GK+V V C++ A RL + L T+ ++ P+++ L+ P R D +AFDG H N+K Y+ A D VL P + A EW WK+ L G
Sbjct: 8 YIYVTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDI-RRYPRIPAA----------------ETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENKAILDL-------------------CTDTSADELPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKLDG 259
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV) HSP 1 Score: 128 bits (322), Expect = 1.520e-29 Identity = 86/295 (29.15%), Postives = 131/295 (44.41%), Query Frame = 2 Query: 209 LVSFLLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGA-GINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRLVK-LNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLTG 1087
+V +L V +R W+RL ++I I S++RHK+V+IGDGF G GD++ GL + L + K+R W++INRG T S+ W P + +Q + RDA+I +V +G+MD P +R NI+ IC+ L +GK+V V + S IN + +L R + ++ E PV L P R + +AFDG+H N+ GY+ A D +V+ P+ A EW WK+ L G
Sbjct: 4 IVLYLYVIVRSYCAWLWLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMDAQRSPPIEPEVTLR-----------------NIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCVDTQHDEL-----------------------PVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKLDG 258
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: A0A2D4BF39_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF39_PYTIN) HSP 1 Score: 126 bits (316), Expect = 1.660e-28 Identity = 91/305 (29.84%), Postives = 152/305 (49.84%), Query Frame = 2 Query: 209 LVSFLLVALRRALTVAWIRLNKFISSA--DWQIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKT-------AQDEFSEEETCQ---SVKNIREICETLRAEGKKVVVCNVMT-SGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRL-VKLNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHL 1081
+ S + ++R LT+ W+++ +++ A D ++ F HK+V+IGD F G+GD++V+GG AGL + L DKVR RW ++NRG G+T+ DWL + + S+A RDAE+ +V LG+ + CV + + + ++ D + +CQ KN+ IC+TLR +GK V + + + S G + + LN L + +++ G+ T PV L +L+ R+ AFD HL + GY+ A + + L P+M EW+ WK+ L
Sbjct: 1 MASAXVTSIRLYLTLLWLKICRWVVHALYDRSLKPTDQFFHKIVVIGDDFAAGVGDYLVLGGNAGLAQHLPHAIAQSDKVRHRWAVVNRGVVGSTTGDWLLNAPTKYMDDILSSKATRDAEVVIVVLGSQEY--RCVPVRLHTLPRSWITDEIVGMDRNRSQPSCQVGVMHKNLVAICDTLRKKGKHVCLATIASPSPLGQDEKIP----LNAMLEEFCASTK-------------GDDT-------PVVLGPRLDTYAFRRESLLAFDSYHLCSNGYKVLARNTADFLVPIMTGVEWKTWKKQL 279
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: K3W6Y8_GLOUD (SGNH_hydro domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6Y8_GLOUD) HSP 1 Score: 120 bits (302), Expect = 6.840e-27 Identity = 86/290 (29.66%), Postives = 139/290 (47.93%), Query Frame = 2 Query: 227 VALRRALTVAWIRLNKFISSADW--QIRSCSDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRLV---KLNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHL 1081
VA+R L + W ++ F+ ++ + + HK V+IGD F G+GD++ +G G+ + L DKVR RWEIIN G G+TSADWL + + Y+ SR+ DAEI +V LG++++ P A+ T + KN+ +C+TLR +GKKV + V ++ + + LN L + +++ S E + +V +L+ R++ A+D H N+ GY+ A + + L PMM A EW WK+ L
Sbjct: 7 VAIRLYLALLWWKICGFLLYVMHVKSLKPANQYLHKAVIIGDDFAAGIGDYITIGNAGGIAQYLSPIIAQSDKVRHRWEIINAGVPGSTSADWLLNAARQNYKNVFSSRSMGDAEIVIVILGSVELRD-----PKAS-------------TFEVKKNLASLCDTLRKKGKKVCLATVASATPLASDTETIP--LNTALEEFCKST----------------------STEEIPVVLGPRLDTYAFRRENSLAYDRFHFNSSGYKLLARNTADFLIPMMTAIEWSTWKKQL 254
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: H3HBQ7_PHYRM (SGNH_hydro domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBQ7_PHYRM) HSP 1 Score: 119 bits (299), Expect = 1.420e-26 Identity = 91/290 (31.38%), Postives = 134/290 (46.21%), Query Frame = 2 Query: 227 VALRRALTVAWIRLNKFISSADWQIRSC---SDFRHKVVLIGDGFVEGLGDWVVMGGMAGLTRQLQRDAETDDKVRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRL-VKLNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLT 1084
VALR L + W L F++ + +R S F HKVV+IGD F G+GD+V +GG G AE KVR W I+N G GTT+ADWL S K ++ SRA DA I ++ LG++++ P AA + + ++ EIC+TLR +GK+V + V + + + LN L + +++ T PV L +L+ R+ +FD H N++ YR A + + L PMM A EW WK L+
Sbjct: 3 VALRAFLALVWWHLCHFLAY-NLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYVTIGGAGGGI------AEYLKKVRHNWVIVNAGVPGTTTADWLMSSPKKYFKNVFTSRAMADASIVIIVLGSVEIKN-----PAAAGHEMKR-------------HLMEICDTLRKKGKQVCLATVASPDPTADETDTASSTLNTALEQFCKSTSTEET--------------------PVILGPRLDTYAFRRESALSFDKYHFNSQSYRQLARNTADFLVPMMTAQEWTTWKEQLS 247
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI) HSP 1 Score: 119 bits (298), Expect = 2.500e-26 Identity = 91/297 (30.64%), Postives = 140/297 (47.14%), Query Frame = 2 Query: 221 LLVALRRALTVAWIRLNKFISSADWQIRSC---SDFRHKVVLIGDGFVEGLGDWVVMGGMAG-LTRQLQRDAETDDK----VRMRWEIINRGRSGTTSADWLPSDEKSLYQKKVHSRACRDAEIFVVSLGTMDVLTECVGMPVAAIRKTAQDEFSEEETCQSVKNIREICETLRAEGKKVVVCNVMTSGAGINRRAGVAKRLNRQLSLYARNSEATATATAAATTPNGNQTEGASSAEPVRL-VKLNNPRSCRDDGRAFDGLHLNAKGYRAFASDLYEVLGPMMIASEWRIWKRHLT 1084
+LVALR L + W + F++ + +R S F HKVV+IGD F G+GD++ +GG G + + L++ DDK VR W IIN G G+T+ADWL S K ++ S DA I ++ LG+ ++ TA+ E +N+ EIC+TLR +GK+V + V++ + + LN L + +++ TE A PV L +L+ R+ +D H N++ YR A + + L PMM A EW WK L+
Sbjct: 1 MLVALRAFLALVWWHICHFLAY-NLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEIRNS----------GTAEHEIK--------RNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTS----------------TEEA----PVILGPRLDTYAFRRESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLS 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9432.17187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9432.17187.1 >prot_H-paniculata_contig9432.17187.1 ID=prot_H-paniculata_contig9432.17187.1|Name=mRNA_H-paniculata_contig9432.17187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=331bp MRDFWILVSFLLVALRRALTVAWIRLNKFISSADWQIRSCSDFRHKVVLIback to top mRNA from alignment at H-paniculata_contig9432:1628..9256+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9432.17187.1 ID=mRNA_H-paniculata_contig9432.17187.1|Name=mRNA_H-paniculata_contig9432.17187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7629bp|location=Sequence derived from alignment at H-paniculata_contig9432:1628..9256+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9432:1628..9256+ >mRNA_H-paniculata_contig9432.17187.1 ID=mRNA_H-paniculata_contig9432.17187.1|Name=mRNA_H-paniculata_contig9432.17187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1986bp|location=Sequence derived from alignment at H-paniculata_contig9432:1628..9256+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |