mRNA_H-paniculata_contig9429.17183.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: D7FHI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHI5_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.570e-33 Identity = 67/108 (62.04%), Postives = 80/108 (74.07%), Query Frame = 3 Query: 69 LRFSPVATTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH-----DFCQV 377
+++S AT QW+LEG YG++GF A SFSP L V+MR KV CVTGANSGIGY AKSLA RN VHM+CRN+ARGEEAR+R+ ETGNE+V+LH DF QV
Sbjct: 1 MKYSVAATAQWFLEGSRKYGAKGFANACASFSPGDLDVNMRSKVACVTGANSGIGYCAAKSLAERNCTVHMLCRNKARGEEARARLSAETGNEDVYLHVVDVSDFQQV 108
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A812ZE25_9DINO (DHRS12 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZE25_9DINO) HSP 1 Score: 96.7 bits (239), Expect = 5.300e-20 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 3 Query: 63 MVLRFSPVATTQWYLEGVLSYGSRGFQKASTSFSPDAL-AVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
M L++S ++T WYL+GV YG GF +A+ + P L VDM GK +TGANSGIG + A A NA VH++CR++ RG +AR + +GN NVHLH
Sbjct: 1 MGLKYSLLSTPAWYLDGVRRYGHAGFTEAAKHWDPAHLQGVDMSGKHVLITGANSGIGLAAASKFAEMNATVHLLCRSETRGADARDSIKAASGNPNVHLH 101
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: K7F715_PELSI (Uncharacterized protein n=2 Tax=Cryptodira TaxID=8464 RepID=K7F715_PELSI) HSP 1 Score: 91.7 bits (226), Expect = 2.510e-18 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
W+L+G+ Y G++ AS F P L V++ G+ +TGANSGIG + A +A R +H+ICRN+ R EEA+S ++TETGN+NV LH
Sbjct: 9 WFLKGLREYTRSGYESASKHFVPADLEVNVTGRSFMITGANSGIGKAAATEIAKRGGTLHLICRNKERAEEAKSEIITETGNQNVFLH 96
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A8B8EAT8_CRAVI (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EAT8_CRAVI) HSP 1 Score: 91.3 bits (225), Expect = 3.520e-18 Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 3 Query: 99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLHDFCQVLYRRLANF 401
W+++G+ Y GFQ AS +F+ L V+ G+ +TGANSGIG A ++A + VHM+CR+ RGEEAR ++++TGN++VHLH R + NF
Sbjct: 9 WFVKGLREYTKSGFQSASKNFNNADLEVNASGRAFMITGANSGIGKCAAIAIAQKGGTVHMVCRDLTRGEEARQEIISQTGNQDVHLHQLDMSRPRDIFNF 109
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A2V3J6W6_9FLOR (Dehydrogenase/reductase SDR family member 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W6_9FLOR) HSP 1 Score: 91.3 bits (225), Expect = 3.980e-18 Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 90 TTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
T Q+ G L++GSRGF+ SF+P AL +D+ GK VTG SG+G+ A+ +A R VH++CRN A+GE ARS++V ++GN+ V +H
Sbjct: 6 TVQFVALGCLTFGSRGFRARKKSFNPTALDIDLTGKHYIVTGGTSGLGFVTAQQIAERGGTVHIVCRNGAKGETARSQIVAQSGNDRVQIH 96
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: K1R3A5_CRAGI (Dehydrogenase/reductase SDR family member 12 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R3A5_CRAGI) HSP 1 Score: 90.9 bits (224), Expect = 4.870e-18 Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
W+++G+ Y GFQ AS +F+ L V++ G+ +TGANSGIG A ++A + VHM+CR+ RGEEAR ++T+TGN++VHLH
Sbjct: 9 WFVKGLREYTKSGFQSASKNFNNADLEVNVNGRAFMITGANSGIGKCAAIAIAQKGGIVHMVCRDVTRGEEARQEIITQTGNQDVHLH 96
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: UPI0003318DB4 (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003318DB4) HSP 1 Score: 89.0 bits (219), Expect = 9.290e-18 Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 78 SPVATTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
S T W+L+G+ Y S G+ +AS F D L V + G+ VTG+NSGIG ++A +LA R VHM+CR+QA+ E+ R+++VT+T N+ V +H
Sbjct: 2 SAYRNTIWFLKGLREYTSGGYDRASRHFVNDDLDVQLNGRSFLVTGSNSGIGEAIAMALAQRGGRVHMVCRDQAKAEQVRNKIVTKTRNQEVFIH 96
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A6J1SUB1_FRAOC (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SUB1_FRAOC) HSP 1 Score: 89.0 bits (219), Expect = 2.530e-17 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
W+++G+ Y G+Q AS +F+ L VD GKV +TGANSGIG SVA+ +A VHM+CRN EEA++R++ +T N+N++LH
Sbjct: 9 WFMKGLREYTKSGYQSASKNFNDGDLDVDCSGKVYMITGANSGIGESVAQHVAKCGGTVHMVCRNAQTAEEAKARMIEKTNNQNIYLH 96
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: UPI0014868F40 (dehydrogenase/reductase SDR family member 12-like isoform X1 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI0014868F40) HSP 1 Score: 88.6 bits (218), Expect = 3.500e-17 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 3 Query: 99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
W+L G+ Y RG++ A +F P L V + G+ +TGANSGIG + A ++A + VHM+CRN+ + EEARS +V+E+GN VH+H
Sbjct: 9 WFLNGLHQYTRRGYEAAVKNFEPQDLEVSVVGRSFMITGANSGIGRATAMAIAKKGGTVHMVCRNKGKAEEARSDIVSESGNTEVHVH 96
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A6G0IHR4_LARCR (Dehydrogenase/reductase SDR family member 12 n=2 Tax=Eupercaria TaxID=1489922 RepID=A0A6G0IHR4_LARCR) HSP 1 Score: 87.4 bits (215), Expect = 3.860e-17 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
W+L G+ Y +G++ AS F P L V + G+ +TGANSGIG + A ++A + VHM+CRN+ + EEAR+ +V E+GN VH+H
Sbjct: 9 WFLNGIHQYTRKGYEAASKDFEPQDLNVSVVGRSFMITGANSGIGRATAMAIAKKGGTVHMVCRNKDKAEEARTDIVNESGNTEVHVH 96 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9429.17183.1 >prot_H-paniculata_contig9429.17183.1 ID=prot_H-paniculata_contig9429.17183.1|Name=mRNA_H-paniculata_contig9429.17183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp MVLRFSPVATTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTback to top mRNA from alignment at H-paniculata_contig9429:1887..4641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9429.17183.1 ID=mRNA_H-paniculata_contig9429.17183.1|Name=mRNA_H-paniculata_contig9429.17183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2755bp|location=Sequence derived from alignment at H-paniculata_contig9429:1887..4641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9429:1887..4641+ >mRNA_H-paniculata_contig9429.17183.1 ID=mRNA_H-paniculata_contig9429.17183.1|Name=mRNA_H-paniculata_contig9429.17183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig9429:1887..4641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |