mRNA_H-paniculata_contig9412.17173.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: W7U829_9STRA (Morc family cw-type zinc finger protein 4 isoform 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U829_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.860e-14 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 1 LWPFSAVAELVHNSSDAGATEVRLSI--ERFGPNKDRNFVVIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVISVS 285 +W F A+AEL+HNS DAG+T + + + E G + D+G GM EM +F+ GK Y + ER GR G GFKQG LR+G TAVV+S S Sbjct: 86 VWLFGALAELLHNSLDAGSTRLHIDVREEDGGEGGVMVLEIKDNGVGMGPDEMEGMFRLGKTYARDRKNVERVGRYGCGFKQGSLRIGSTAVVLSKS 182
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A0G4G9P0_9ALVE (CW-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G9P0_9ALVE) HSP 1 Score: 77.0 bits (188), Expect = 1.190e-13 Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFVVIDDGSGMTNREM-GQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVISVSKGEEAPMNQRCVPTASFGILSIDAYRKSLRKNTRERVVVEY 408 W F VAE+VHNSSDA AT++ + + +++ V D+G+GM+ + +LF +G+D + Q + GR GVG+K G +R+ +TAVV++ K + T S GI+ +R+ R E + Y Sbjct: 159 WLFGGVAEMVHNSSDADATQLYIDVFFDSHHQENVLEVRDNGTGMSPETVKDRLFSFGRDEAETQRDQSKAGRWGVGYKMGSMRVADTAVVVTKQKKSD---------TVSVGIMCNRPFREEGRLFVFENTTLTY 285
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A446JCN9_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446JCN9_TRITD) HSP 1 Score: 75.1 bits (183), Expect = 3.830e-13 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFV----VIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVIS 279 W F AVAEL+ NS DAGA+ + +SI+ K + V V DDG GMT EM ++ +G D + Y Q++ GR G+GFK G ++LG+ A+V++ Sbjct: 103 WIFGAVAELIDNSRDAGASRLDISIQSMFSKKAKGKVPVLCVSDDGHGMTYEEMMRMVSFGHDKPN-EYCQDQIGRFGIGFKSGAMKLGKDALVLT 197
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A8J5W381_ZIZPA (Morc6_S5 domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5W381_ZIZPA) HSP 1 Score: 74.7 bits (182), Expect = 7.940e-13 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRN----FVVIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVIS 279 W F A+AEL+ NS DAGA+ + +SI K + F VIDDG GMT EM ++ +G D + Q+ GR G+GFK G ++LG+ A+V++ Sbjct: 921 WIFGAIAELIDNSRDAGASRLNISINTLFSKKAESKIPVFSVIDDGHGMTYDEMMRMISFGHKRPD-EHRQDHIGRFGIGFKTGAMKLGKDAIVLT 1015
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A8I7B3Y7_HORVV (CW-type domain-containing protein n=12 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I7B3Y7_HORVV) HSP 1 Score: 74.3 bits (181), Expect = 1.020e-12 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFV----VIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVIS 279 W F AVAELV NS DAGA+ + +SI+ K++ V V DDG GMT EM ++ +G D G + +++ GR G+GFK G ++LG+ A+V++ Sbjct: 222 WIFGAVAELVDNSRDAGASRLDISIQSMFSKKEKGKVPVLCVSDDGLGMTYEEMMRMVSFGHD-GANEHCKDQIGRFGIGFKSGSMKLGKDALVLT 316
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A194YK73_SORBI (CW-type domain-containing protein n=2 Tax=Andropogoneae TaxID=147429 RepID=A0A194YK73_SORBI) HSP 1 Score: 73.6 bits (179), Expect = 1.910e-12 Identity = 38/103 (36.89%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFV----VIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVISVSKGEEA 300 W F A+AEL+ NS DAGA+ + +SIE K + + VIDDG GMT +M ++ +G + + +++ GR G+GFK G ++LG+ A+V++ +K + Sbjct: 247 WMFGAIAELIDNSRDAGASRLSISIEHLFSKKAQKKIPVLSVIDDGHGMTYPDMMRMISFGHKRPN-EHREDQIGRFGIGFKTGAMKLGKDAIVLTQTKSSRS 348
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: UPI001F5D83C9 (MORC family CW-type zinc finger protein 4-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D83C9) HSP 1 Score: 73.2 bits (178), Expect = 2.590e-12 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFV----VIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVIS 279 W F A+AELV NS DAGA+ + +SI+ K V VIDDG GMT EM ++ +G + +S+++ GR G+GFK G ++LG+ AVV++ Sbjct: 211 WIFGAIAELVDNSRDAGASRLDISIQTMFSKKAEGKVPVLSVIDDGCGMTYAEMMRMISFGHKRPN-EHSKDQIGRFGIGFKTGAMKLGKDAVVLT 305
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A061RQC8_9CHLO (Morc family cw-type zinc finger protein 3 n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RQC8_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 3.530e-12 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 10 FSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFVVIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVISVSKGEEAPMNQRCVPTASFGILSIDAYRKSLRKNTRERVVVEYATLNL 423 F A+AELV NS D AT+VR+ I G F V+DDG+GM++ M ++ G + +++ + G+ GVGFK G +R+GETAV+I+ + EE TAS GILS D T VV + NL Sbjct: 295 FGAIAELVDNSWDQAATDVRIGILEEGGAP--VFHVMDDGNGMSHAGMRRMLSMG--HAREEHNKHKLGKYGVGFKNGAMRIGETAVIIT--REEE---------TASVGILSKDMKTGDPEDRTLWTPVVTFKMPNL 417
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A3L6PHX5_PANMI (MORC family CW-type zinc finger protein 3-like n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6PHX5_PANMI) HSP 1 Score: 72.4 bits (176), Expect = 4.650e-12 Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFV----VIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVISVSKGEEA 300 W F A+AEL+ NS DAGA+ + +S+E K + + VIDDG GMT +M ++ +G + +++ GR G+GFK G ++LG+ A+V++ + ++ Sbjct: 195 WIFGAIAELIDNSRDAGASRLNISVESLFSKKAQRKIPVLSVIDDGQGMTYADMMRMISFGHKR-PTDHREDQIGRFGIGFKTGAMKLGKDAIVLTQTSSSKS 296
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Match: A0A1D6P4Q5_MAIZE (Protein MICRORCHIDIA 7 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6P4Q5_MAIZE) HSP 1 Score: 71.6 bits (174), Expect = 8.770e-12 Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 4 WPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFV----VIDDGSGMTNREMGQLFKYGKDYGDLSYSQERCGRNGVGFKQGVLRLGETAVVISVSKGEEA 300 W F A+AEL+ NS DAGA+ + +SIE K + + VIDDG GMT ++ ++ +G + + +++ GR G+GFK G ++LG+ A+V++ +K + Sbjct: 116 WIFGAIAELIDNSRDAGASRLSISIEHLFSKKAQKKIPVLSVIDDGHGMTYPDIMRMISFGHKRPN-GHREDQIGRFGIGFKTGAMKLGKDAIVLTQTKSSRS 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9412.17173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9412.17173.1 >prot_H-paniculata_contig9412.17173.1 ID=prot_H-paniculata_contig9412.17173.1|Name=mRNA_H-paniculata_contig9412.17173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp LWPFSAVAELVHNSSDAGATEVRLSIERFGPNKDRNFVVIDDGSGMTNREback to top mRNA from alignment at H-paniculata_contig9412:3302..4168- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9412.17173.1 ID=mRNA_H-paniculata_contig9412.17173.1|Name=mRNA_H-paniculata_contig9412.17173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=867bp|location=Sequence derived from alignment at H-paniculata_contig9412:3302..4168- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9412:3302..4168- >mRNA_H-paniculata_contig9412.17173.1 ID=mRNA_H-paniculata_contig9412.17173.1|Name=mRNA_H-paniculata_contig9412.17173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at H-paniculata_contig9412:3302..4168- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |