mRNA_H-paniculata_contig941.17172.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: D7FQ07_ECTSI (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ07_ECTSI) HSP 1 Score: 452 bits (1162), Expect = 2.010e-154 Identity = 226/269 (84.01%), Postives = 248/269 (92.19%), Query Frame = 1 Query: 1 LERAWTSQ---TQGVKMVVTRSQTGSLPADSTFRKYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
L++ W ++ T V MV TRSQTGS+P+ S+ RKYSVILPTYNER+NLPLTTWMLVRTFQ+H L+FEIVVV+DSSPDGTL VA+ LQ LYGK VVRILSRPGKMGLGTAYMDGLRMITG+HVILMDADMSHHPKYIPDLVQKM G HD+VSGTRY LGGGVAGWDLFRK+TSRVANFLAHTLL+PGVTDLTGSYRLFTK+ALEDIMK+VTSKGYVFQMEVIVRA+LKGYSVGEVPI+FVDRIYGESKLGSGEIVSYL+GL+NLF TT
Sbjct: 13 LQQEWKTRRVHTTAVAMVATRSQTGSVPSSSSARKYSVILPTYNERDNLPLTTWMLVRTFQEHDLDFEIVVVDDSSPDGTLAVAKMLQGLYGKEVVRILSRPGKMGLGTAYMDGLRMITGTHVILMDADMSHHPKYIPDLVQKMEEGDHDVVSGTRYGLGGGVAGWDLFRKLTSRVANFLAHTLLSPGVTDLTGSYRLFTKAALEDIMKEVTSKGYVFQMEVIVRARLKGYSVGEVPITFVDRIYGESKLGSGEIVSYLIGLVNLFLTT 281
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: A0A835Z8R0_9STRA (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R0_9STRA) HSP 1 Score: 330 bits (847), Expect = 1.760e-107 Identity = 159/235 (67.66%), Postives = 193/235 (82.13%), Query Frame = 1 Query: 94 KYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
KYSVI+PTYNERENLPL W+L TF QH ++FEI++V+DSSPDGTL+VA+KLQ+LYG+ +RI SRPGK+GLG+AYMDGL ++G+H+ILMDAD+SHHPK+IP + D+V+GTRY GGGV+GWDL RK+TSR ANFLA LL PGV+DLTGS+RL+ K L+D+M+ V SKGYVFQMEVIVR K GY+V EVPI+FVDRIYG SKLG+ EIVSYL GLL LFF T
Sbjct: 5 KYSVIMPTYNERENLPLIIWLLQDTFTQHNIDFEILIVDDSSPDGTLDVARKLQQLYGEDAIRIHSRPGKLGLGSAYMDGLERVSGTHIILMDADLSHHPKFIPQFIAAQAASGCDVVTGTRYRGGGGVSGWDLRRKLTSRGANFLASELLRPGVSDLTGSFRLYRKEVLQDVMRHVKSKGYVFQMEVIVRCKCLGYTVAEVPITFVDRIYGVSKLGAMEIVSYLKGLLWLFFNT 239
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: W2JPX9_PHYPR (Dolichol-phosphate mannosyltransferase subunit 1 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2JPX9_PHYPR) HSP 1 Score: 325 bits (832), Expect = 3.290e-105 Identity = 156/239 (65.27%), Postives = 193/239 (80.75%), Query Frame = 1 Query: 82 STFRKYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
+T KYSV+LPTYNERENLPL W+L +TF +KLN+EIV+VED+SPDGTL+VA+ LQ++YGK + IL R GK+GLG+AY DGL+ TG V LMDAD+SHHPK+IP+ ++K DIV+GTRY GGGV GWDL RK+TSRVAN+LA LL P VTDLTGS+RL+ + +EDIM + GYVFQME++VRA+ + YS+ EVPI+FVDRIYGESKLG+GEIV+YL GLLNLFFTT
Sbjct: 2 ATEHKYSVLLPTYNERENLPLVVWLLDKTFVDNKLNYEIVIVEDNSPDGTLQVARDLQQIYGKDKIVILPREGKLGLGSAYRDGLKKATGDFVFLMDADLSHHPKFIPEFIKKQAEENCDIVTGTRYVSGGGVYGWDLRRKLTSRVANYLATVLLNPSVTDLTGSFRLYKRDVIEDIMSAIQGLGYVFQMEILVRARQRQYSIDEVPITFVDRIYGESKLGAGEIVAYLKGLLNLFFTT 240
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: H3G934_PHYRM (Dolichol-phosphate mannosyltransferase subunit 1 n=16 Tax=Oomycota TaxID=4762 RepID=H3G934_PHYRM) HSP 1 Score: 323 bits (827), Expect = 1.860e-104 Identity = 154/239 (64.44%), Postives = 194/239 (81.17%), Query Frame = 1 Query: 82 STFRKYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
+T KYSV+LPTYNERENLPL W+L +TF +KL +EIV+VED+SPDGTL+VA++LQ++YGK + IL R GK+GLG+AY DGL++ TG V LMDAD+SHHPK+IP+ ++K DIV+GTRY GGGV GWDL RK+TSRVAN+LA LL P VTDLTGS+RL+ + +EDIM + GYVFQME++VRA+ + +S+ EVPI+FVDRIYGESKLG+GEIV+YL GLLNLFFTT
Sbjct: 2 ATSHKYSVLLPTYNERENLPLVVWLLDQTFTDNKLKYEIVIVEDNSPDGTLQVARELQQIYGKDKIVILPREGKLGLGSAYRDGLKLATGDFVFLMDADLSHHPKFIPEFIKKQAEEDCDIVTGTRYVSGGGVYGWDLRRKLTSRVANYLATVLLNPSVTDLTGSFRLYKRDVIEDIMSVIQGLGYVFQMEILVRARQRQFSIAEVPITFVDRIYGESKLGAGEIVAYLKGLLNLFFTT 240
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: A0A2D4CIK6_PYTIN (Dolichol-phosphate mannosyltransferase subunit 1 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CIK6_PYTIN) HSP 1 Score: 320 bits (820), Expect = 2.030e-103 Identity = 151/235 (64.26%), Postives = 191/235 (81.28%), Query Frame = 1 Query: 94 KYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
KYSV+LPTYNERENLPL W+L ++F+++ L++EIV+VED+SPDGTL+VA +LQ++YGK + IL R GK+GLG+AY DGL+ TG VILMDAD+SHHPK+IP+ + K G +DIV+GTRY GGGV GWDL RK+TSRVAN+LA LL P +DLTGS+RL+ + +EDIM + GYVFQME++VRA+LK YS+ EVPI+FVDRIYGESKLG+GEIV+YL GL LF TT
Sbjct: 5 KYSVLLPTYNERENLPLIVWLLEKSFRENSLDYEIVIVEDNSPDGTLQVATELQKIYGKDHIVILPRAGKLGLGSAYRDGLKQATGDFVILMDADLSHHPKFIPEFIAKQASGDYDIVTGTRYVQGGGVFGWDLRRKLTSRVANYLATVLLNPHCSDLTGSFRLYKRDVIEDIMSSIQGLGYVFQMEILVRARLKNYSIAEVPITFVDRIYGESKLGAGEIVAYLKGLAQLFLTT 239
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: A0A5D6XFF6_9STRA (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFF6_9STRA) HSP 1 Score: 320 bits (819), Expect = 2.870e-103 Identity = 150/235 (63.83%), Postives = 192/235 (81.70%), Query Frame = 1 Query: 94 KYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
KYSV+LPTYNERENLPL W+L +TF+++ L+FE+V++ED+SPDGTL+VA LQ++YGK + IL R GK+GLG+AY DGL+ TG V LMDAD+SHHPK+IP+ ++K DIV+GTRY GGGV GWDL RK+TSRVAN+LA LL P V+DLTGS+RL+ ++ +EDIM + GYVFQME++VRA+ + Y++ EVPI+FVDRIYGESKLG+GEIV+YL GLLNLFFTT
Sbjct: 5 KYSVLLPTYNERENLPLIVWLLEKTFRENSLDFEVVIIEDNSPDGTLQVALDLQKIYGKQQIVILPRQGKLGLGSAYRDGLKKATGDFVFLMDADLSHHPKFIPEFIKKQASRDFDIVTGTRYVSGGGVYGWDLRRKLTSRVANYLATVLLNPSVSDLTGSFRLYKRAVIEDIMSSIQGLGYVFQMEILVRARERRYTIAEVPITFVDRIYGESKLGAGEIVAYLKGLLNLFFTT 239
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: F0X0G7_9STRA (Dolichol-phosphate mannosyltransferase subunit 1 n=2 Tax=Albugo TaxID=65356 RepID=F0X0G7_9STRA) HSP 1 Score: 314 bits (805), Expect = 3.400e-101 Identity = 149/235 (63.40%), Postives = 189/235 (80.43%), Query Frame = 1 Query: 94 KYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFTT 798
KYSV+LPT+NERENLPL W+L +TF+Q+ L +EI+++ED+SPDGTL VA++LQ +YG ++ILSR GK+GLG+AY DGL++ TG +V LMDAD+SHHPK+IP +Q + DIV+GTRY GGGV GWDL RKVTSRVANFLA LL P TDLTGS+R++ ++ LE IM + GYVFQME++VRA+ + YS+ EVPI+FVDRIYGESKLG+GEI +YL GLL LFFTT
Sbjct: 3 KYSVLLPTFNERENLPLIIWLLEQTFRQNDLKYEIIIIEDNSPDGTLAVAKQLQSIYGDENIKILSRKGKLGLGSAYRDGLKLATGDYVFLMDADLSHHPKFIPQFIQTQQKHNCDIVTGTRYLPGGGVYGWDLRRKVTSRVANFLATILLDPSCTDLTGSFRMYKRTVLETIMTSIQGLGYVFQMEILVRARQQHYSIAEVPITFVDRIYGESKLGAGEIAAYLKGLLQLFFTT 237
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: A0A1Y2D166_9FUNG (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D166_9FUNG) HSP 1 Score: 311 bits (798), Expect = 4.560e-100 Identity = 143/231 (61.90%), Postives = 190/231 (82.25%), Query Frame = 1 Query: 94 KYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNL 786
KYSV+LPTYNERENLP+ TWMLV+ F+ ++L+FEI++++D+SPDGTLE+A++LQ +G + + R GK+GLGTAY+ G+ TG +V +MDADMSHHPK+IPD ++K + G D+V+GTRYALGGGV GWDL RK+TSRVANFLA TLL PGV+DLTGS+RL+ K LE +++ SKGYVFQME++VRA+ +++GEVPI+FVDR++GESKLG+ EIV YL GL+ L
Sbjct: 8 KYSVLLPTYNERENLPIITWMLVKAFKDNELDFEIIIIDDASPDGTLEIAKQLQAAFGADRIVLRPRAGKLGLGTAYIHGIEHATGDYVFIMDADMSHHPKFIPDFIKKQKEGNFDVVTGTRYALGGGVHGWDLRRKLTSRVANFLADTLLTPGVSDLTGSFRLYKKPVLEAMIRATKSKGYVFQMEMMVRARQMNFTIGEVPITFVDRVFGESKLGAAEIVGYLKGLITL 238
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: A0A507D2B0_9FUNG (Dolichol-phosphate mannosyltransferase subunit 1 n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507D2B0_9FUNG) HSP 1 Score: 311 bits (798), Expect = 6.420e-100 Identity = 146/242 (60.33%), Postives = 196/242 (80.99%), Query Frame = 1 Query: 64 GSLPADSTFRKYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLF 789
G+ A +T KYSV+LPTYNERENLP+ TWMLV+ F+ ++L+FEI++++D+SPDGTLEVA++LQ+ +G+ + + R GK+GLGTAY+ G++ TG V +MDADMSHHPK+IP+ ++K + G +D+V+GTRYALGG V GWDL RK+TSRVANFLA TLL PGV+DLTGS+RL+ K AL +++ SKGYVFQME++VRA+ +++GEVPI+FVDR++GESKLG EIV YL GL LF
Sbjct: 8 GTHMASTTPHKYSVLLPTYNERENLPIITWMLVKAFKDNELDFEIIIIDDASPDGTLEVAKQLQKAFGEDKIVLRPRAGKLGLGTAYVHGIQNATGDFVFIMDADMSHHPKFIPEFIRKQKEGNYDVVTGTRYALGGSVHGWDLRRKLTSRVANFLADTLLTPGVSDLTGSFRLYKKDALAAMIRATKSKGYVFQMEMMVRARQMNFNIGEVPITFVDRVFGESKLGPDEIVGYLKGLWALF 249
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Match: UPI000644B477 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B477) HSP 1 Score: 310 bits (794), Expect = 2.560e-99 Identity = 145/248 (58.47%), Postives = 194/248 (78.23%), Query Frame = 1 Query: 52 RSQTGSLPADSTFRKYSVILPTYNERENLPLTTWMLVRTFQQHKLNFEIVVVEDSSPDGTLEVAQKLQELYGKSVVRILSRPGKMGLGTAYMDGLRMITGSHVILMDADMSHHPKYIPDLVQKMRVGKHDIVSGTRYALGGGVAGWDLFRKVTSRVANFLAHTLLAPGVTDLTGSYRLFTKSALEDIMKDVTSKGYVFQMEVIVRAKLKGYSVGEVPISFVDRIYGESKLGSGEIVSYLMGLLNLFFT 795
R T S S KY++ILPTYNE ENLP+ W++ ++ +N+E+++VED+SPDGTL++AQ+LQ++ G+ ++ILSRPGKMGLG+AYMDG++M TG+ +ILMDAD+SHHPK+IP +QK + +IV+GTRYA GGGV GW+ +RK+TSRVAN++A LL PGV+DLTGS+RL+ K LE ++ SKGYVFQME++VRA Y +GEVPI+FVDRIYG S L SGEIVSYL G++NLFF+
Sbjct: 4 RKTTSSSSGSSADDKYTIILPTYNESENLPIILWLIDTELKKEFINYEVIIVEDNSPDGTLQIAQQLQKIIGEDKIKILSRPGKMGLGSAYMDGMKMATGNWIILMDADLSHHPKFIPQFIQKQKKYNTEIVTGTRYASGGGVYGWNFYRKLTSRVANYIASVLLTPGVSDLTGSFRLYRKDVLEKLISVNKSKGYVFQMEMMVRANQFNYKIGEVPITFVDRIYGVSNLDSGEIVSYLKGVMNLFFS 251 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig941.17172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig941.17172.1 >prot_H-paniculata_contig941.17172.1 ID=prot_H-paniculata_contig941.17172.1|Name=mRNA_H-paniculata_contig941.17172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp MVVTRSQTGSLPADSTFRKYSVILPTYNERENLPLTTWMLVRTFQQHKLNback to top mRNA from alignment at H-paniculata_contig941:23669..29142- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig941.17172.1 ID=mRNA_H-paniculata_contig941.17172.1|Name=mRNA_H-paniculata_contig941.17172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5474bp|location=Sequence derived from alignment at H-paniculata_contig941:23669..29142- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig941:23669..29142- >mRNA_H-paniculata_contig941.17172.1 ID=mRNA_H-paniculata_contig941.17172.1|Name=mRNA_H-paniculata_contig941.17172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at H-paniculata_contig941:23669..29142- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |