mRNA_H-paniculata_contig939.17155.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI) HSP 1 Score: 807 bits (2085), Expect = 6.250e-285 Identity = 458/698 (65.62%), Postives = 521/698 (74.64%), Query Frame = 1 Query: 1 VCLREMHVYCGAVRVSVVDGDLGEMVLGSLERMSMSVAATATEVDLKFKLGSFQIDSHMPGTPFPVLLQPVKQG-QGHRGDRHQKCVRFALVAAPHVKNVTYVKLASLEVEEFDLRLDEGMVRWAQGLADRVLWTLVLERRADEMSTWPLPEEAFCS-QAACVEAKSAGRHHRDSSRRSFNSVGRLQSGVAH-----HPRGKFVSRYVYLEVFQVSSVKVRLSLQRAKESVETVYVGVKPGQMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQ----NQHLQPYALNEGRKNAATDAGC------------WDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLGQRPARGALPA-SKVVVIITRSMVMLMLASVGEVVLDERLDRIQVVERTKEGVLLHLRPIPPPPSAYKCTR--ASSFPGLPPTPSEQDGELNARRRSRYSQTKGIACSDEDLKSRLYDLIDSAVKSSTR 2016
+ LRE+HV+C AVRVSVVDGD GE+VLGSLE MSM+VAAT EV++KFKLGS QID+H+PGT FPVLLQPV+ G QG GD KCVRF LVAAP VKNV Y+KLASL VEEFDLRLDEGMVRWAQGLADRV+WTLV +RRADEM WPLP+EAFCS QA A + D S SVG Q G F SRYVYLEVFQVSSVKVRLSLQRAK+S + VYVGVKPGQMLLDLMMRMDSAHIK SLIVHN TTTRSRL +TAREHY+REL QQAFLMLGSLEAFGNPVGL+RG+GQG+QDFVKEPV+GLLKSVEDLAPEEL+ GM RGAGSLL HSVGGVANSVSLITGTVSQNLTTLAMDKEYK+KRA RK+ RGEN+D+LDGIGSA SLARGL DGVSGL KNP++GAE G AGFAKGVGTG+LGLVVKPVVGV DAATD+LQGV+GTT SIA+IG +P +Q P + GR + AG WDEG+ QVRPRRVL G R LR Y +ED+ AAALL+ T++++EEYAAHL++ Q GA + VVI+T+S+V+L+ GEVVL++RL IQ VE EGVLLHL P PS K R AS + GLPP R Q +GI C +E K RLYDL+D+AVK++ R
Sbjct: 87 ISLRELHVFCRAVRVSVVDGDRGEVVLGSLEGMSMNVAATEAEVEVKFKLGSLQIDNHLPGTSFPVLLQPVRPGYQG--GDN--KCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENIDGS-----SVGGGQGSTGMVVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITGTVSQNLTTLAMDKEYKLKRARRKDARGENKDVLDGIGSAGGSLARGLTDGVSGLIKNPLKGAESGGLAGFAKGVGTGMLGLVVKPVVGVTDAATDLLQGVRGTTASIAQIGKPSPSASPYHQTAGPPSAGHGRGGSLGAAGXXXXXXXXXXXXXWDEGVGQVRPRRVLYGSMRTLRPYAIEDARAAALLRTTRYKEEEYAAHLEISQAAGAGATSKPTSAVVILTQSLVLLLRVPGGEVVLEQRLAGIQAVEIKAEGVLLHLHP----PSTPKAPRQGASGYLGLPPXXXXXXXXPGGGRNRGRVQARGIPCREEASKRRLYDLLDAAVKNAAR 771
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE) HSP 1 Score: 817 bits (2111), Expect = 9.230e-284 Identity = 461/698 (66.05%), Postives = 528/698 (75.64%), Query Frame = 1 Query: 1 VCLREMHVYCGAVRVSVVDGDLGEMVLGSLERMSMSVAATATEVDLKFKLGSFQIDSHMPGTPFPVLLQPVKQGQGHRGDRHQKCVRFALVAAPHVKNVTYVKLASLEVEEFDLRLDEGMVRWAQGLADRVLWTLVLERRADEMSTWPLPEEAFCSQAACVEAKSAGRHHRDSSRRSFNSVGRLQSGVAH-----HPRGKFVSRYVYLEVFQVSSVKVRLSLQRAKESVETVYVGVKPGQMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQ----NQHLQPYALNEGRKN---AATDAGC---------WDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLGQRPARGALPASK---VVVIITRSMVMLMLASVGEVVLDERLDRIQVVERTKEGVLLHLRPIPPPPSAYKCTRA--SSFPGLPPTPSEQDGELNARRRSRYSQTKGIACSDEDLKSRLYDLIDSAVKSSTR 2016
V LRE+HV+C AVRVSVVDGD GE+VLGSLE MSM+VAAT EV++KF+LGS QID+H+PGT FPVLLQPV+ G ++G + KCVRF LVAAP VKNV Y+KLASL VEEFDLRLDEGMVRWAQGLADRV+WTLV +RRADEM WPLP EAFCS +A G SVG Q A G F SRYVYLEVFQVSSVKVRLSLQRAK+S + VYVGVKPGQMLLDLMMRMDSAHIK SLIVHN TTTRSRL +TAREHY+REL QQAFLMLGSLEAFGNPVGL+RG+GQG+QDFVKEPV+GLLKSVEDLAPEEL+ GM RGAGSLL HSVGGVANSVSLITGTVSQNLTTLAMDKEYK+KRA RK+ RGEN+D+LDGIGSA SLARGL DGVSGL KNP++GAE GFAGFAKGVGTG+LGLVVKPVVGV DAATD+LQGV+GTT SIA+IG P +Q P + +G+ AA D+G WDEG++QVRPRRVL G R LR Y +ED+ AAALL+ T++ +EEYAAHL++ Q A GA ASK VVI+T+S+V+L+ GEVVL++RL IQ VE EGV+LHL P PS K R S + GLPP PSE+D R Q GI C +E LK RLYD++D+AVK++ R
Sbjct: 440 VSLRELHVFCRAVRVSVVDGDRGEVVLGSLEGMSMNVAATEAEVEVKFELGSLQIDNHLPGTSFPVLLQPVRPG--YQGGNN-KCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPREAFCSS----QAGHPGGGKPSGENADGGSVGGGQGTTAMVVSRGGSEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQGMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITGTVSQNLTTLAMDKEYKLKRARRKDARGENKDVLDGIGSAGGSLARGLTDGVSGLIKNPLKGAESGGFAGFAKGVGTGMLGLVVKPVVGVTDAATDLLQGVRGTTASIAQIGKPCPSASPYHQTAGPPSAGQGQGGSLGAAGDSGXXXXXXXXXXWDEGVSQVRPRRVLYGSMRTLRPYAIEDARAAALLRTTRYEEEEYAAHLEISQ--AAGAGAASKPTSAVVILTQSLVLLLRVPGGEVVLEQRLAGIQAVEIKAEGVMLHLHP----PSTPKAPRQGPSGYLGLPPPPSEEDDGPGGERNRGRVQAHGIPCREEALKRRLYDMLDTAVKNAAR 1124
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA) HSP 1 Score: 359 bits (921), Expect = 4.350e-104 Identity = 244/649 (37.60%), Postives = 334/649 (51.46%), Query Frame = 1 Query: 1 VCLREMHVYCGAVRVSVVD-GDLGEMVLGSLERMSMSVAATATEVDLKFKLGSFQIDSHMPGTPFPVLLQPVKQ----GQGHRGDRHQKCVRFALVAAPHVKNVTYVKLASLEVEEFDLRLDEGMVRWAQGLADRVLWTLVLERRA--------------DEMS--TWPLPEEAFCSQAACVEAKSAGRHHRDSSRRSFNSVGRLQSGVAHHPRGKFVSRYVYLEVFQVSSVKVRLSLQRAKESVETVY--VGVKPGQMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMR----------GAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQ-----------NQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLGQRPARGALPASKVVVIITRSMVMLMLASVGEVVLDERLDRIQVVERTKEG-VLLHLRP 1812
VCL C + VSV+D + GEMVL S++ + TE+ L+ ++G QID+H+P TPFPVLLQPV++ G G +G +H C R + APHV N+ Y K SL++ +LRL+E +V WAQ AD+V L E DE S W LP + +A +A + L + +++ +VRLSLQR + E V + QM+LD MMRMDSAHI +S I+HN T +L A HY + Q LMLG+LEAFGNPVGL RGV QGVQDF+ EPV+GL++SVE+L PEE AG+ RG GSLLKH+VGG+ANS S+I GT+ N+ LA+D EYKVKRA+R E R +DL+ G+ S + A G+ DGVSG+ +P+R GAE++GF +VG ADAATDV QGV+ TD IAR V++ + ++RPRRVL G R L+ Y L D+ AALL FR+E+Y H+ +V++T V+ + ++ V L ERLD I+ +ER + G +L+H++P
Sbjct: 5069 VCLN-----CKDIHVSVIDEAEGGEMVLA--RDASVNYFSCPTELQLQVQVGHLQIDNHLPRTPFPVLLQPVERCDDGGGGGKGGQH--CARLMVRVAPHVANIVYCKALSLKLSPLELRLEESIVLWAQRFADKVRRYLQTEAAXXXXXXXXXXXXXXXDEASDAAWELPHTVLGAPQMPQQAAAAAPGASSPLWARYVYFHILATXXXXXXXXXXXXXXXXXXXXXIAAFQVRLSLQRPTQGAEEVRRAPALTVTQMVLDAMMRMDSAHINLASFIMHNETIATQQLGAIAAAHYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQGVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAGTIGTNVGNLALDTEYKVKRAVRLEERSPPQDLMAGLSSGGMAFAAGIGDGVSGIILDPLRQARGWPSTCQGAEKEGFVXXXXXXXXXXXXXXXXXMVGAADAATDVFQGVRAATDEIARKNVSSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARIRPRRVLYGRSRVLKPYVLADAQIAALLLEKGFRNEDYMEHMT-----------TDNFIVVVTHRRVIAISSATHTVHLAERLDAIEGLERQQGGGLLIHIKP 5697
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.120e-70 Identity = 184/586 (31.40%), Postives = 287/586 (48.98%), Query Frame = 1 Query: 46 SVVDGDLGEMVLGSLERMSM---------SVAATATEVDLKFKLGSFQIDSHMPGTPFPVLLQP-----VKQGQGHRGD----RHQKCVRFALVAAP-HVKNVTYVKLASLEVEEFDLRLDEGMV----RWAQGLADRVLWTL---------VLERRADEMSTWPLP--EEAFCSQAACVEAKSAGRHHRD-----------------SSRRSFNSVGRLQSGVAHHPRGKFVSRYVYLEVFQVSSVKVRLSLQRAKESVETVYVGVKPGQMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKR--ALRKER-RGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLG 1641
S++D + E+ + SL+ + M A TA V G QID+H P PFPV L P ++ G + Q + + AP H+ VT ++ ++ + +D + R+ G DR+ ++ + A+ WP P ++ F +ACV A AG+ R+ +S R+ S + G V + L + + + + R + V G+ +++D ++R + A + + + N T ++ HY L +LGSL AFGNP+GL+RG+G GV DFV EP+ GL KS+E+L P +I G+ RG GSL +H++GGVA+S SL+T T+S+N+ L +D+ Y KR +L + G ++DGIG+ + L +G+ DGVSG+ + PMRGAE+ G GFAKGVG G+LGLVVKPVVG++DAATD++ GVKG+ + + Q + + +Q+RPRRV G ER +R Y D+ AA L+ T+ E+Y +H+D+G
Sbjct: 19 SLIDQEPSEIAVISLQSVKMLSKWNKQRGKDATTAVSV------GWLQIDNHCPNAPFPVALCPDSTIEIENADGETENVVNLPEQPVIAIGINFAPKHISEVTCLRSVTVAPRNIAVGVDLAFIVRLQRFLLGAQDRLEQASEDENDEGGELIWKYAESRELWPFPNLQKMF---SACVNASGAGKESRELFFEGLTVFPYNLSLSVASPRAMTSAQAMLEGPGAAAIHAAVRKGDLLVTAGSGAGVLGVKIGRTNRTALAVVRGIFKS-IIVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLTQTLSKNMAVLTLDRRYAQKRDRSLHQSNPSGATPTIVDGIGTGSAKLLKGVYDGVSGVIRAPMRGAEKGGPEGFAKGVGKGLLGLVVKPVVGLSDAATDIMIGVKGSVEGGTYNDIGKMQQRIKR---------------------ASQLRPRRVFYGRERTIREYKQSDATAAQLMMTTRLAGEQYFSHVDMG 573
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA) HSP 1 Score: 252 bits (643), Expect = 3.690e-69 Identity = 184/586 (31.40%), Postives = 287/586 (48.98%), Query Frame = 1 Query: 46 SVVDGDLGEMVLGSLERMSM---------SVAATATEVDLKFKLGSFQIDSHMPGTPFPVLLQP-----VKQGQGHRGD----RHQKCVRFALVAAP-HVKNVTYVKLASLEVEEFDLRLDEGMV----RWAQGLADRVLWTL---------VLERRADEMSTWPLP--EEAFCSQAACVEAKSAGRHHRD-----------------SSRRSFNSVGRLQSGVAHHPRGKFVSRYVYLEVFQVSSVKVRLSLQRAKESVETVYVGVKPGQMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKR--ALRKER-RGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLG 1641
S++D + E+ + SL+ + M A TA V G QID+H P PFPV L P ++ G + Q + + AP H+ VT ++ ++ + +D + R+ G DR+ ++ + A+ WP P ++ F +ACV A AG+ R+ +S R+ S + G V + L + + + + R + V G+ +++D ++R + A + + + N T ++ HY L +LGSL AFGNP+GL+RG+G GV DFV EP+ GL KS+E+L P +I G+ RG GSL +H++GGVA+S SL+T T+S+N+ L +D+ Y KR +L + G ++DGIG+ + L +G+ DGVSG+ + PMRGAE+ G GFAKGVG G+LGLVVKPVVG++DAATD++ GVKG+ + + Q + + +Q+RPRRV G ER +R Y D+ AA L+ T+ E+Y +H+D+G
Sbjct: 230 SLIDQEPSEIAVISLQSVKMLSKWNKQRGKDATTAVSV------GWLQIDNHCPNAPFPVALCPDSTIEIENADGETENVVNLPEQPVIAIGINFAPKHISEVTCLRSVTVAPRNIAVGVDLAFIVRLQRFLLGAQDRLEQASEDENDEGGELIWKYAESRELWPFPNLQKMF---SACVNASGAGKESRELFFEGLTVFPYNLSLSVASPRAMTSAQAMLEGPGAAAIHAAVRKGDLLVTAGSGAGVLGVKIGRTNRTALAVVRGIFKS-IIVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGDGVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLTQTLSKNMAVLTLDRRYAQKRDRSLHQSNPSGATPTIVDGIGTGSAKLLKGVYDGVSGVIRAPMRGAEKGGPEGFAKGVGKGLLGLVVKPVVGLSDAATDIMIGVKGSVEGGTYNDIGKMQQRIKR---------------------ASQLRPRRVFYGRERTIREYKQSDATAAQLMMTTRLAGEQYFSHVDMG 784
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A4D9D9K3_9STRA (FYVE-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9K3_9STRA) HSP 1 Score: 253 bits (646), Expect = 6.140e-68 Identity = 207/661 (31.32%), Postives = 311/661 (47.05%), Query Frame = 1 Query: 16 MHVYCGAVRVSVVDGDLGE-MVLGSLERMSMSVAATATE----VDLKFKLGSFQIDSHMPGTPFPVLLQPVKQGQGHRGDRHQKC----------VRFAL-VAAPHVKNVTYVKLASLEVEEFDLRLDEGMVRWAQGLADRVLWTLVLERRADEMSTWPLPEEAF--CSQAACVEAKSAGRHH---------RDSSRRSFNSVGRLQSGVAHHPRGKFVSRY-VYLEVFQVSSVKVRLSLQRAKESVETVYVGVKPGQMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGEN-------------------RDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRD--------------EEYAAHLDLGQRPARGALPASKVVVIITRSMVMLMLASVGEVVLDERLDRIQVVERTKE--GVLLHLR 1809
M + AV +S+VD E +VLG + ++ +V E + + + SFQ+D+HM F V+L+P VRF + V PH ++++ + L LD+ V Q + R+ + E T + + + C A+ + H R S L + + K + +E ++ + V LSL R +ES E VYVG+KP +ML D++ R+D A + V T S L+ AR HY RE+ + F MLGSL A G PV L+RG+G+G DFV +P+ L++SVE L PE G+ RG SLLKH+VGGVA+S S + V + L+ LA DKEY++ R + R GE D+L+G+G L RGL DGV+G+ P+RGAER+GF G KG+G +LGLVVKPVVG+ADAA+DVLQGV+GT AA A E ++Q+RP+R + G ER L+ Y + D+ A L + + R+ E Y + ++G+ + ++ V+ + ++ S EVVL E +QV R++E G++LH++
Sbjct: 3742 MRLALPAVILSLVDDTPEEVLVLGLGDVVAQAVKGGGEEGRGGLRSRLTIDSFQVDNHMARAHFAVVLRPADDEHALLAPNPSSSPSSLSSRPPSVRFDMDVGPPHPSLFAHIRMLRVSTRRVILNLDQSTVLAVQRMGHRM-------KGEGEAGTEAVGKIMYLPCQDASRGSPAEVAKLHFSPIQGEVVRQGCGGSLTPGRNLHEEIQRKKQRKPKQGVKILVEELRIEPLSVNLSLSRPRESPEDVYVGLKPNKMLSDMLNRLDEARLNLQPFEVSFLLTPASHLLWLARVHYAREVKRHVFSMLGSLRALGKPVTLIRGIGKGASDFVSQPIQSLVRSVELLDPEIFFQGVGRGTDSLLKHTVGGVASSASCVMENVGKQLSCLAFDKEYRLARE--RGREGEAGXXXXXXXXXXXXXXXXRPADVLEGLGLGGKRLMRGLVDGVTGVVAAPVRGAEREGFRGMVKGMGKXMLGLVVKPVVGLADAASDVLQGVQGTA--------------------------GAALTA----EALSQLRPKRAVYGEERRLKPYDMADAQAQMLFERVRCREGRRKGGKRLLARQEEWYCDYAEIGRNRGGVVVLSTARVLFLNEEGILHYSLSWREVVLAE----LQVPTRSEERLGLVLHVQ 4359
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A7S0CCM6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCM6_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.510e-62 Identity = 183/584 (31.34%), Postives = 283/584 (48.46%), Query Frame = 1 Query: 43 VSVVDGDLGEMVLGSLERMSMSV------AATATEVDLKFKLGSFQIDSHMPGTPFPVLLQPVKQGQGHR--GDRHQKC-----VRFALVA---AP-HVKNVTYVKLASLEVEEFDLRLDEGMV----RWAQGLADRVLWTLVLERR---------ADEMSTWPLPEEAFCSQAACVEAKSAGRHHRDSSRRSFNSVGRLQSGV--AHHPRGKFVSRYVYLEVFQVSSVK--VRLSLQRAKESVETVYVGVKPGQ---------------MLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLGQR 1647
+S VD + E+ + SL+ + +S + TAT ++ +G Q+D+H P PFPV ++P ++ + GD +K V F LVA AP H +T + + ++ + +D + R+ G+ + E ++ WP P + VE +A + F S+ L V + P S LE +++ VR K + +GVK G +++D ++R +SA + + +N + +L HY + GSL AFGNPVGL+RG+G GV DFV EP+ GL KSV +L P + G+ RG GSL +H+VG +A S SL+T T+S+N+ L +D++Y +R RK E + ++G+GS +G+ DGV+G+Y+ PMRGAE+ G GFAKGVG G+LGL+VKPV+G+ DAATDV+ GVKG+ + G+ + +Q Q+RPRR L G ERALR+Y + D+ A+ L+ T+ E + + DLG R
Sbjct: 110 LSFVDAEPSEIAVVSLKNVDISAKWNKIRSQTAT---IRASIGFLQVDNHCPSAPFPVAVRPNEKMDENEYDGDELKKSNENSQVPFLLVALTFAPEHSSGITCFEQVKISPKDVSIAVDLAFIVRVQRYLLGIQEHFDSCSTSETSYGYGGLVAYSESRQVWPAPNLVKIFED--VEYSAAIGVGVGCQKNYFESLIFLPCKVNLSVAPARALTSVQSLLEGTDAAAIHAAVRKGDLLVKGASNPGLLGVKIGSKNRTALSVIRGVFKSIVVDALLRCESAVLVFPGIAFNNHNSNTQQLTTHLAAHYLAAFRGNLPALFGSLSAFGNPVGLIRGLGDGVSDFVSEPIKGLKKSVAELDPIFALDGVARGTGSLARHTVGSIAGSASLLTETLSKNMAVLTLDRKYAQRRD-RKSLDREGGNFVEGVGSGGVKFFKGVMDGVTGVYRAPMRGAEKRGVEGFAKGVGKGLLGLLVKPVIGLTDAATDVMIGVKGSVEC-GGGGLKLRGTRRVQ-----------------------QIRPRRALYGRERALRSYNIADASASLLMMKTRLAGERFWSQHDLGNR 663
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: B5YP64_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YP64_THAPS) HSP 1 Score: 224 bits (572), Expect = 2.520e-58 Identity = 161/571 (28.20%), Postives = 265/571 (46.41%), Query Frame = 1 Query: 43 VSVVDGDLGEMVLGSLERMSMSVAATATEVD---LKFKLGSFQIDSHMPGTPFPVLLQPVKQGQGHRGDRHQKC------VRFALVAAPHVKNVTYVKLASLEVEEFDLRLDEGMV----RWAQGLADRVL-------WTLVLERRADEMSTWPLPEEAFCSQAACVEAKSAGRHHRDSSRRSFNSVGRLQSGVAHHP-RGKFVSRYVYLEVFQVSSVKVRLSLQRAKESVETVYVGVKPGQ---------------MLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKR---ALRKERRGENRDLLDGIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDL 1638
+S +D E+ + SL + + + + + +G FQ+D+H P PFPV + P + + + + + L AP + A + + + LD + R+ G+ + ++ W+ + D TW +P + E +GR+ FN +A P R KF E + +++ + + +GVK G +L+D ++R D A + + + N ++ + HY L+ +LGSL AFGNP+GL+R +G GV DFV EPV G +S+E++ P +++G+ RG GSL +H+VGG A+S +++T T ++N+ L +D++Y +R K + ++L G S L G+ +GV+G+ P+RGAERDGF GFAKG+G G+LGLVVKPV+G D TD L GVKG+ DS G++ Q Q +RPRR L G +R +R Y ++D+ AA + ++ EEY +H+D+
Sbjct: 4424 LSFIDSSPSELAVLSLHQCGVKARWNSLRKEHAKINIVVGWFQLDNHCPNAPFPVAVCPSVERESDLNEPRKTFSSDRAFLELKLDFAPQHRTGIQCLSAGAALHDVSISLDLAFILRMQRFLLGVQEHIMEAIGNGSWSFI-----DSQETWDIPN----IERLIKERSMSGRN--------FNHKAMYFQRLAILPCREKF-------EGTEAAAIHAAVRKGDLLVGEGSGVIGVKIGSKNRTALAVVRGMFKSILVDALLRCDGASLNFQGVALFNHLSSTRGMKSYLGAHYLASLIANVPALLGSLAAFGNPLGLMRDLGDGVSDFVNEPVKGFKRSIEEMDPSFVMSGVARGTGSLARHTVGGFADSAAMLTETAAKNMAVLTLDRKYAQRRDRVMKLKANDAKTANVLKGFESGMLKLINGVLEGVTGVVSKPIRGAERDGFEGFAKGIGKGLLGLVVKPVIGTTDLLTDTLIGVKGSVDSTRPQGLSTVQGQ---------------------------IRPRRALYGRDRVVRPYRIDDATAATIQSRSRLGGEEYLSHVDM 4943
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A1Z5JH04_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH04_FISSO) HSP 1 Score: 222 bits (566), Expect = 1.490e-57 Identity = 198/634 (31.23%), Postives = 305/634 (48.11%), Query Frame = 1 Query: 16 MHVYCGAVRVSVVDGDLGEMVLGSLERMSMSVAA----TATEVDLKFKLGSFQIDSHMPGTPFPVLLQPVKQGQGHRGD-----RHQKCVR-------FALVAAPHVKNVTYVKLASLEVEEFDL--RLDEGMVRWAQGLADRVLWTLVLERRADEMST-WPLPEEAFCSQAACVEAKSAGRHHRDSSRRSFNSVG------RLQSGVAHHPRGKFVSRYVYLEVFQVSSV-----KVRLSLQRAKESVETVYVG--------VKPG---QMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGEN-RDLLD-----GIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLGQRPARGALPASKVVVIITRSMVMLMLASVGEVVLDERLDRIQVVE 1776
+ V V VS+VD E+ + +L+ ++ +A+ T + + Q+D+ + PFPV + +++ G R C + L AP K T V L S+ + DL R+D + Q A + +R+ + + T WP P+ ++ +EA R R + F G ++ VA P LE Q S + K + L+R+ +V V VG V G +++D ++R+D A + +++ N T S+L HY L Q +LGSL A GNP+GL RG+G GV+D + EPV G +SV+++ L+ G+ RG SL +H+VGG A+S +++T T S+N+ L +D+ Y KR RGE RD D G+GS L G +GV+G+ K P+RGAER G GFAKG+G G+LGL+VKP++G++D DV+ GVKG+ + G Q+Q +T +RPRR L G ER+LRAY + D+ A++LL T+ EEY HLD+G R ++V + R +L+L S G+ +L RL ++ VE
Sbjct: 4087 LRVSLRGVVVSLVDSAPSEIAVITLKNVN-GIASWNKYRTTNAAVIITITDLQMDNMISNAPFPVAVSAIREAFSQGGTFLTEPRSADCDKQIPPVLVIGLSFAPKHKTGT-VCLRSVTIAPRDLGVRVDLAFLIRLQKFALEL--ESYFQRQNEILDTKWPAPD--IINKVRGLEA----RAQRGIGLKKFFFSGFTILPHNIKLSVA--PARALTGPQAALEGKQNSEIHQAIRKGDVRLERSSAAVLGVRVGRTNRTAVAVLRGVFKSIVVDALLRLDGATVNFGGVVLRNHIATGSQLSSQLGAHYLNSLRQNVPALLGSLAALGNPIGLARGLGDGVKDLILEPVKGFQRSVQEMDASYLVDGVARGTFSLARHTVGGFADSAAMLTETFSKNMAVLTLDRRYAQKRD-----RGEILRDHDDINVALGLGSGVQKLITGFLEGVTGVVKAPIRGAERKGLEGFAKGIGKGLLGLLVKPIIGISDGIADVMLGVKGSVE-----GATGVQSQ------------------------LTPLRPRRALYGRERSLRAYNMADAAASSLLMRTRLAGEEYFNHLDMGDR---------LLLVTVKR---LLVLGSKGQELLLIRLKHVESVE 4662
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Match: A0A1Z5KIF3_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIF3_FISSO) HSP 1 Score: 221 bits (562), Expect = 4.410e-57 Identity = 184/580 (31.72%), Postives = 285/580 (49.14%), Query Frame = 1 Query: 37 VRVSVVDGDLGEMVLGSLERMSMSVAA----TATEVDLKFKLGSFQIDSHMPGTPFPVLLQPVKQGQGHRGD-----RHQKCVR-------FALVAAPHVKNVTYVKLASLEVEEFDL--RLDEGMVRWAQGLADRVLWTLVLERRADEMST-WPLPEEAFCSQAACVEAKSA-GRHHRDSSRRSFNSVGR-LQSGVAHHPRGKFVSRYVYLEVFQVSSV-----KVRLSLQRAKESVETVYVG--------VKPG---QMLLDLMMRMDSAHIKASSLIVHNATTTRSRLMMTAREHYKRELMQQAFLMLGSLEAFGNPVGLLRGVGQGVQDFVKEPVMGLLKSVEDLAPEELIAGMTRGAGSLLKHSVGGVANSVSLITGTVSQNLTTLAMDKEYKVKRALRKERRGEN-RDLLD-----GIGSATDSLARGLKDGVSGLYKNPMRGAERDGFAGFAKGVGTGVLGLVVKPVVGVADAATDVLQGVKGTTDSIARIGVNAPQNQHLQPYALNEGRKNAATDAGCWDEGMTQVRPRRVLDGPERALRAYCLEDSVAAALLQVTQFRDEEYAAHLDLGQR 1647
V VS+VD E+ + +L+ ++ +A+ T + + Q+D+ + PFPV + P+++ G R C + L AP K T V L S+ + DL R+D + Q A + +R+++ + WP+P+ ++ +EA++ G R F + ++ VA P LE Q S + K + L R+ +V V VG V G +++D ++R+D A + + + N T S+L HY L Q +LGSL A GNP+GL RG+G GV+D + EPV G +SV+++ L+ G+ RG SL +H+VGG A+S +++T T S+N+ L +D+ Y KR RGE RD D G+GS L G +GV+G+ K P+RGAE+ G GFAKG+G G+LGL+VKP++G++D DV+ GVKG+ + GV Q+Q +T +RPRR L G ER+LR+Y + D+ A++LL T+ EEY HLD+G R
Sbjct: 2105 VVVSLVDSAPSEIAVLTLKNLN-GIASWNQYRTTNAAVIITITDLQMDNMISNAPFPVAVSPIREDFSQGGTFLTEPRSADCDKQTPPVLVIGLSFAPKHKTGT-VCLRSVTIAPRDLGVRVDLAFLIRLQKFALEL--ESYFQRQSEILDNKWPIPD--ISNKVRRLEARAQLGIGLRKFFFSGFTILPHNIKLSVA--PARALTGAQAALEGKQNSEIHQAIRKGDVRLDRSSTAVLGVRVGRTNRTAVAVLRGVFKSIVVDALLRLDGATVNFGGVSLRNHIATGSQLSSQLGAHYLNSLRQNVPALLGSLAALGNPIGLARGLGDGVKDLILEPVKGFQRSVQEMDASHLVDGVARGTLSLARHTVGGFADSAAMLTETFSKNMAVLTLDRRYAQKRD-----RGEILRDHDDINVALGLGSGVQKLITGFLEGVTGVVKAPIRGAEKKGLEGFAKGIGKGLLGLLVKPIIGISDGIADVMLGVKGSVE-----GVTGVQSQ------------------------LTPLRPRRALYGRERSLRSYNMADAAASSLLMRTRLAGEEYFDHLDMGDR 2642 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig939.17155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig939.17155.1 >prot_H-paniculata_contig939.17155.1 ID=prot_H-paniculata_contig939.17155.1|Name=mRNA_H-paniculata_contig939.17155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=669bp MHVYCGAVRVSVVDGDLGEMVLGSLERMSMSVAATATEVDLKFKLGSFQIback to top mRNA from alignment at H-paniculata_contig939:7621..29668- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig939.17155.1 ID=mRNA_H-paniculata_contig939.17155.1|Name=mRNA_H-paniculata_contig939.17155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=22048bp|location=Sequence derived from alignment at H-paniculata_contig939:7621..29668- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig939:7621..29668- >mRNA_H-paniculata_contig939.17155.1 ID=mRNA_H-paniculata_contig939.17155.1|Name=mRNA_H-paniculata_contig939.17155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4014bp|location=Sequence derived from alignment at H-paniculata_contig939:7621..29668- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |