mRNA_H-paniculata_contig9389.17154.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: D7G2L4_ECTSI (Protein trm112, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L4_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.360e-63 Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRLITHNMLKSNIKGV+ G+PLGIEVVK EEQELEFN +FI NML+KLEW AFR AA AL++ LPEEVT+E+K DE+ LR+VHHALMEVHL+EGELVCPETGRKFPVRQGVPNMLLHED Sbjct: 1 MRLITHNMLKSNIKGVESGYPLGIEVVKMEEQELEFNPDFIRNMLAKLEWDAFRAAATALEAGGELPEEVTEEMKGDEEVLRRVHHALMEVHLVEGELVCPETGRKFPVRQGVPNMLLHED 121
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: A0A7S3UZQ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZQ9_HETAK) HSP 1 Score: 159 bits (403), Expect = 3.750e-48 Identity = 80/123 (65.04%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLP--EEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRLITHNML+SNI GV GFPL IE E QE++FN EFI NML KLEW A R A + L + LP +EVTDE+K+DE+FL+ VHH L+E+H+ EG+LVCPETGRKFPV+ G+PNMLLHED Sbjct: 14 MRLITHNMLQSNISGVTNGFPLTIEAQTYEIQEIDFNPEFIQNMLPKLEWEALRSAISNLGLSAELPPADEVTDEMKQDEEFLKVVHHVLLEIHVQEGDLVCPETGRKFPVKGGIPNMLLHED 136
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: A0A7S1TWS9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWS9_9STRA) HSP 1 Score: 156 bits (395), Expect = 7.460e-47 Identity = 75/121 (61.98%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRLITHNMLKS+++GV+ G+PL IE + E +E EFN EFI M+ KLEWGAF AA L AEGLPEE++DE K + + L+++HHAL+EVH++ G LVCP TGRKF V +G+PNMLLHED Sbjct: 1 MRLITHNMLKSSVRGVEDGYPLAIEAEEVETEETEFNQEFIEAMVGKLEWGAFVAAATTLGVAEGLPEELSDEDKGNGEVLQRIHHALLEVHVITGFLVCPSTGRKFKVHKGIPNMLLHED 121
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: UPI001C25C317 (multifunctional methyltransferase subunit TRM112 homolog A-like n=6 Tax=Salvia TaxID=21880 RepID=UPI001C25C317) HSP 1 Score: 155 bits (393), Expect = 8.320e-47 Identity = 76/121 (62.81%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL+THNML SNIKG+ GFPLGIEV KTEE+E+E NA+F+ NM +K+EW A +AA L E LP+ V + + ++FLR+ HHAL+E+HL EG LVCPETGRKFPV +G+PNMLLHED Sbjct: 1 MRLLTHNMLSSNIKGLTSGFPLGIEVEKTEEKEVEMNADFLRNMFAKVEWKALVEAAKTLGYTE-LPDNVEPSMLDSDEFLRRFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHED 120
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: D8QYX8_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QYX8_SELML) HSP 1 Score: 153 bits (386), Expect = 8.810e-46 Identity = 73/121 (60.33%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL+THNML NIKGV +GFPLGIEV K E + +EFN +F+ + K+EW AF++AA L LPE+V + +D+DFLR+ HHAL+E+HL EG+LVCPETGRKFPV +G+PNMLL+ED Sbjct: 1 MRLLTHNMLSCNIKGVSKGFPLGIEVAKLETKTVEFNPQFLRHSFPKIEWKAFQEAAKTL-GVNDLPEQVEPSMLDDDDFLRRFHHALLEIHLEEGDLVCPETGRKFPVAKGIPNMLLNED 120
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: A0A4D8YMG2_SALSN (Multifunctional methyltransferase subunit TRM112 n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8YMG2_SALSN) HSP 1 Score: 155 bits (393), Expect = 1.020e-45 Identity = 76/121 (62.81%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL+THNML SNIKG+ GFPLGIEV KTEE+E+E NA+F+ NM +K+EW A +AA L E LP+ V + + ++FLR+ HHAL+E+HL EG LVCPETGRKFPV +G+PNMLLHED Sbjct: 1 MRLLTHNMLSSNIKGLTSGFPLGIEVEKTEEKEVEMNADFLRNMFAKVEWKALVEAAKTLGYTE-LPDNVEPSMLDSDEFLRRFHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHED 120
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: A0A4Y7JXT6_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JXT6_PAPSO) HSP 1 Score: 152 bits (384), Expect = 1.780e-45 Identity = 75/121 (61.98%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL+THNML NIKGV GFPLG+E+VK E +E+EFN++FI NM K+EW A DAA ++ E LPEEV + E ++FL++ HHAL+E+HL EG LVCPETGRKFPV +G+PNMLL+ED Sbjct: 1 MRLLTHNMLSCNIKGVTNGFPLGLEIVKHEVKEVEFNSDFIRNMFVKIEWKALVDAAKSM-GYEELPEEVDSPMLESDEFLKRFHHALLELHLEEGALVCPETGRKFPVVKGIPNMLLNED 120
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: A0A7N2R169_QUELO (Uncharacterized protein n=6 Tax=Fagaceae TaxID=3503 RepID=A0A7N2R169_QUELO) HSP 1 Score: 152 bits (384), Expect = 1.830e-45 Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDE-IKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL+THNML SNIKGV GFPL IEV K +++++FNA+F+ NM K+EW AF DAA + AE LPEEV D I E+FL K HHAL+E+HL EG LVCPETGR+FPV +G+PNMLLHED Sbjct: 1 MRLLTHNMLSSNIKGVSNGFPLRIEVEKVLKKQVDFNADFLRNMFPKIEWKAFVDAARTIGYAE-LPEEVDDSSILTSEEFLNKFHHALLELHLEEGALVCPETGRRFPVNKGIPNMLLHED 121
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: A0A5B7CA72_DAVIN (Uncharacterized protein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7CA72_DAVIN) HSP 1 Score: 153 bits (386), Expect = 2.300e-45 Identity = 73/121 (60.33%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL+THNML SNIKGV GFPLGIEV K E++++FNA+F+ NM K+EW A DA+ + AE LPEE + + +DFL++ HHAL+E+HL EG L+CPETGR+FPV +G+PNMLLHED Sbjct: 32 MRLLTHNMLSSNIKGVTNGFPLGIEVEKVVEKQVDFNADFLKNMFLKIEWKALVDASRTMGYAE-LPEEAEPSMLDSDDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNMLLHED 151
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Match: B9H733_POPTR (Uncharacterized protein n=9 Tax=Saliceae TaxID=238069 RepID=B9H733_POPTR) HSP 1 Score: 152 bits (383), Expect = 2.520e-45 Identity = 76/121 (62.81%), Postives = 90/121 (74.38%), Query Frame = 1 Query: 1 MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWGAFRDAAAALDSAEGLPEEVTDEIKEDEDFLRKVHHALMEVHLLEGELVCPETGRKFPVRQGVPNMLLHED 363 MRL THNML SNIKGV GFPL IEV + E++++FN +F+ N+ KLEW A D A L AE LPEE + E E+FLRKVHHAL+E+HL EG L CPETGRKFPV +G+PNMLLHED Sbjct: 1 MRLFTHNMLSSNIKGVSNGFPLRIEVEQVLEKQVDFNPDFVKNLFPKLEWKALVDGARTLGYAE-LPEEADSSMLESEEFLRKVHHALLELHLEEGALTCPETGRKFPVTKGIPNMLLHED 120 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9389.17154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9389.17154.1 >prot_H-paniculata_contig9389.17154.1 ID=prot_H-paniculata_contig9389.17154.1|Name=mRNA_H-paniculata_contig9389.17154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MRLITHNMLKSNIKGVQQGFPLGIEVVKTEEQELEFNAEFISNMLSKLEWback to top mRNA from alignment at H-paniculata_contig9389:6730..8747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9389.17154.1 ID=mRNA_H-paniculata_contig9389.17154.1|Name=mRNA_H-paniculata_contig9389.17154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2018bp|location=Sequence derived from alignment at H-paniculata_contig9389:6730..8747+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9389:6730..8747+ >mRNA_H-paniculata_contig9389.17154.1 ID=mRNA_H-paniculata_contig9389.17154.1|Name=mRNA_H-paniculata_contig9389.17154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig9389:6730..8747+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |