mRNA_H-paniculata_contig9379.17148.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: D7FWY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWY8_ECTSI) HSP 1 Score: 320 bits (821), Expect = 7.390e-101 Identity = 146/171 (85.38%), Postives = 156/171 (91.23%), Query Frame = 3 Query: 216 QWPTPGEFNALPLSSRTKIYSDYGDAGKMTWVPHEEPPKHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERRL 728 +WP P FNAL SSR+KIY DYGD G MTW PHEEPPKHPLPPFTAETAL+KT AAEAAWN++DPAKVA AY+PDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLW+FEGNRISARFEYEW+D+ GQWYRTHGNEHWEFD+ GYMRWRDMSANDI I ENERRL Sbjct: 55 EWPNPAAFNALSHSSRSKIYCDYGDEGSMTWKPHEEPPKHPLPPFTAETALKKTKAAEAAWNTRDPAKVAAAYSPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWSFEGNRISARFEYEWYDEKGQWYRTHGNEHWEFDDLGYMRWRDMSANDIPIDENERRL 225
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A5J4YPW8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPW8_PORPP) HSP 1 Score: 206 bits (524), Expect = 4.950e-58 Identity = 107/181 (59.12%), Postives = 128/181 (70.72%), Query Frame = 3 Query: 198 ASPTAKQWPTPGEFNALPLSSRTKIYSDYGDAGKMTWVPH--EEPPKHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHD-DDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERRLA 731 +S + + W E N+ S R+ SD + + ++ +E + P+PPFT ETALQK AA+AAWNS+DPA VA AY+ D+VWRNR EIF GR E++AFLTRKW KE Y L+K+LWAF NRI RFEYEW D QWYRTHGNE WEFDERGYMRWRDMSAND IHE+ERRLA Sbjct: 23 SSGSERDWTNEHELNSTSYSLRS---SDSAPSRQWHFLGPLLDEGARMPVPPFTRETALQKVKAADAAWNSRDPATVARAYSVDSVWRNRTEIFRGRTEIEAFLTRKWCKETEYVLEKNLWAFSENRIGVRFEYEWKDVAANQWYRTHGNELWEFDERGYMRWRDMSANDFPIHESERRLA 200
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A6T6NQP1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NQP1_9RHOD) HSP 1 Score: 196 bits (497), Expect = 1.400e-54 Identity = 95/168 (56.55%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 225 TPGEFNALPLSSRTKIYSDYGDAGKMT-WVPHEEPPKHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWH-DDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENER 722 T G N+L +S ++ +Y+ + G + + H++P + PLPPF ETALQK AAE AWN+KDP KV AY PDTVWRNRD IF GR+EV+ FL+ KW KEQ Y+L K+LW + GNRI ARF YE+ QWYR HGNE WEFD RGYM RDMS NDI I E++R Sbjct: 6 TEGSLNSLDISKKSTLYTFIAEKGPIAGFQSHDDPARMPLPPFNEETALQKVKAAENAWNTKDPEKVCLAYTPDTVWRNRDHIFCGRDEVKRFLSNKWEKEQDYKLVKNLWCYSGNRIGARFTYEYRLQGTDQWYRCHGNELWEFDGRGYMMHRDMSGNDIPIDESDR 173
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A5J4XW98_9CHLO (Hisitidine kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XW98_9CHLO) HSP 1 Score: 194 bits (492), Expect = 2.140e-54 Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 3 Query: 321 EPPKHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERR 725 EP K P+PPFT ETA +K AAE AWN+ DPAKV+ AY PD+ WRNRDE F GR+ ++AFLTRKW KE Y+L K LW ++GNRIS RFEYE+HD GQW+R HGNEHWEF+++GYM RDMSAND I E+ERR Sbjct: 3 EPNKPPVPPFTLETATKKVKAAEDAWNTCDPAKVSMAYTPDSKWRNRDEFFEGRDAIKAFLTRKWEKELQYKLMKELWCYQGNRISVRFEYEYHDHSGQWWRAHGNEHWEFNDQGYMLRRDMSANDFIIQESERR 137
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A7S1THY9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THY9_9RHOD) HSP 1 Score: 194 bits (492), Expect = 2.210e-54 Identity = 89/135 (65.93%), Postives = 102/135 (75.56%), Query Frame = 3 Query: 321 EPPKHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERR 725 +PP+ P+P FT ETA K AAE AWN++DP +VA AY D+ WRNRDE F GR + FL RKW+KE YRL K LW ++GNRIS RFEYEWHD DGQWYRTHGNEHWEFD+ GYMR RDMSANDI I +RR Sbjct: 4 DPPRLPVPTFTEETARAKVQAAEDAWNTRDPERVAAAYTIDSEWRNRDEFFRGRPAIVEFLRRKWAKELDYRLMKELWCYQGNRISVRFEYEWHDHDGQWYRTHGNEHWEFDDAGYMRRRDMSANDIPILREDRR 138
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A2R6W6S5_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W6S5_MARPO) HSP 1 Score: 192 bits (488), Expect = 6.870e-54 Identity = 89/130 (68.46%), Postives = 101/130 (77.69%), Query Frame = 3 Query: 339 LPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERRL 728 +PPFT ETA K AAE AWNS+DPA+V+ AY D+ WRNR EIF GRE+++ FL+RKW E YRL K LW + GNRIS RFEYEWHD GQWYRTHGNEHWEFD+ G MR RDMSANDI IH +ERRL Sbjct: 6 VPPFTEETARAKVQAAEDAWNSRDPARVSMAYTEDSEWRNRTEIFKGREKIREFLSRKWQTELEYRLMKELWCYTGNRISVRFEYEWHDSAGQWYRTHGNEHWEFDDEGLMRRRDMSANDIPIHAHERRL 135
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A835YWJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ5_9STRA) HSP 1 Score: 194 bits (493), Expect = 7.540e-54 Identity = 98/182 (53.85%), Postives = 123/182 (67.58%), Query Frame = 3 Query: 228 PGEFNALPLSSRTKIYSDYGDAGKMTWVPH--EEPPKHPLPPF-TAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDG------------QWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERRL 728 P FN L + ++K Y D +AGK+ W P + P + PLPPF T ALQK AAE AWN++DP +VA AY+ DTVWRNRDE GR+ V+AFL RKW++E YRL+KHLWA G RI+ RFEYE++ ++ QW R HG E WEFD++GYMRWRDMSAND+ I E+ERRL Sbjct: 5 PKNFNDLEVGPKSKRYMDAAEAGKLKWKPPAADLPDRLPLPPFKTKAQALQKVKAAEDAWNTRDPERVAAAYSADTVWRNRDEFLHGRDAVRAFLERKWARESRYRLRKHLWAHSGRRIAVRFEYEYYCEEXXXXXXXXXXXXXQWRRAHGIELWEFDDKGYMRWRDMSANDVPIAESERRL 186
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A1M5RA36_9BACT (Uncharacterized protein n=1 Tax=Chryseolinea serpens TaxID=947013 RepID=A0A1M5RA36_9BACT) HSP 1 Score: 192 bits (487), Expect = 1.010e-53 Identity = 91/136 (66.91%), Postives = 103/136 (75.74%), Query Frame = 3 Query: 321 EPPKHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERRL 728 EP +HPLPPFT ETALQK AAE AWNSKDP KV+ AY DT WRNR E GREEV+AFLTRKW KE Y+LKK LW F NR++ RFEYEWHD GQW+R++GNE WEFDE GYMR R S ND+ I +ER+L Sbjct: 2 EPKRHPLPPFTMETALQKVQAAEDAWNSKDPEKVSLAYTVDTEWRNRTEFINGREEVKAFLTRKWQKELDYKLKKELWGFRENRMAVRFEYEWHDHTGQWFRSYGNELWEFDENGYMRKRFASINDLPIEASERKL 137
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: A0A559QPD7_9ALTE (Uncharacterized protein n=1 Tax=Alteromonadaceae bacterium 2753L.S.0a.02 TaxID=1403320 RepID=A0A559QPD7_9ALTE) HSP 1 Score: 191 bits (484), Expect = 3.250e-53 Identity = 87/133 (65.41%), Postives = 105/133 (78.95%), Query Frame = 3 Query: 330 KHPLPPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERRL 728 +HPLPPFT ETA QK AE AWN++DPAKVA AY D+ WRNR+E F+GRE ++ FLTRKW KE YRLKK LWA+ GNRI+ RFEYEWHDD GQWYR++GNE+WEF E G+M+ R S ND+ I E+ERR+ Sbjct: 6 RHPLPPFTEETARQKVQMAENAWNTRDPAKVALAYTEDSEWRNRNEFFSGREAIREFLTRKWQKEHDYRLKKSLWAYTGNRIAVRFEYEWHDDAGQWYRSYGNENWEFSETGHMQKRFASINDLEITESERRI 138
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Match: UPI0019C80FCD (Nuclear transport factor 2 family protein n=1 Tax=Gloeobacterales cyanobacterium ES-bin-141 TaxID=2812628 RepID=UPI0019C80FCD) HSP 1 Score: 189 bits (480), Expect = 1.010e-52 Identity = 88/128 (68.75%), Postives = 98/128 (76.56%), Query Frame = 3 Query: 342 PPFTAETALQKTNAAEAAWNSKDPAKVAGAYAPDTVWRNRDEIFAGREEVQAFLTRKWSKEQGYRLKKHLWAFEGNRISARFEYEWHDDDGQWYRTHGNEHWEFDERGYMRWRDMSANDISIHENERR 725 PPFT ETA K AAE AWN++DP VA AY PD+ WRNR E F GR+E++AFL RKW++E YRL K LWAF NRIS RFEYEWHD+ GQWYRTHGNEHWEFD+ G MR RDMSAND I E ERR Sbjct: 7 PPFTEETARAKVKAAENAWNTRDPEIVARAYTPDSEWRNRTEFFTGRDEIKAFLRRKWAQELDYRLMKELWAFTSNRISVRFEYEWHDETGQWYRTHGNEHWEFDDEGLMRRRDMSANDYKIDEAERR 134 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9379.17148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9379.17148.1 >prot_H-paniculata_contig9379.17148.1 ID=prot_H-paniculata_contig9379.17148.1|Name=mRNA_H-paniculata_contig9379.17148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp MTPGFSAVCLALSASPRWVPLRTLPRVFSGSLSMSASPTAKQWPTPGEFNback to top mRNA from alignment at H-paniculata_contig9379:1515..7662+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9379.17148.1 ID=mRNA_H-paniculata_contig9379.17148.1|Name=mRNA_H-paniculata_contig9379.17148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6148bp|location=Sequence derived from alignment at H-paniculata_contig9379:1515..7662+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9379:1515..7662+ >mRNA_H-paniculata_contig9379.17148.1 ID=mRNA_H-paniculata_contig9379.17148.1|Name=mRNA_H-paniculata_contig9379.17148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig9379:1515..7662+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |