mRNA_H-paniculata_contig937.17145.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig937.17145.1 vs. uniprot
Match: A0A6H5L8G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G2_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 1.010e-9 Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 2 Query: 86 MDIFILAGELRDAPIDAYRVKGLLIVVTHADSQSAGYLERGSATIDDSTAATSEVPKSAHYAQRGHV 286
MDI I G L A AYR KG+L+ VTHAD Q+ +L G AT D + A SE K HYA+ GHV
Sbjct: 1 MDIVIRPGALASASSPAYRHKGILLDVTHADPQAQVHLRNGGATSDGTAAQASEARKRQHYARPGHV 67 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig937.17145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig937.17145.1 >prot_H-paniculata_contig937.17145.1 ID=prot_H-paniculata_contig937.17145.1|Name=mRNA_H-paniculata_contig937.17145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp RNHATAGATGHQEHGRGRRLVYGGPGLPDGHIHPCRRAPRCSHRRLPRQGback to top mRNA from alignment at H-paniculata_contig937:28482..28887+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig937.17145.1 ID=mRNA_H-paniculata_contig937.17145.1|Name=mRNA_H-paniculata_contig937.17145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=406bp|location=Sequence derived from alignment at H-paniculata_contig937:28482..28887+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig937:28482..28887+ >mRNA_H-paniculata_contig937.17145.1 ID=mRNA_H-paniculata_contig937.17145.1|Name=mRNA_H-paniculata_contig937.17145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at H-paniculata_contig937:28482..28887+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |