mRNA_H-paniculata_contig9362.17136.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5JGF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF6_9PHAE) HSP 1 Score: 832 bits (2150), Expect = 6.420e-271 Identity = 465/907 (51.27%), Postives = 594/907 (65.49%), Query Frame = 2 Query: 3560 KEMPEMENIEERPST*GSPCCIVAKNNGSPRFCVDYWHTLNRYIVRKSWPLLNMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA--WFGLSFIGDCIFGVGI*LC-------VPIDHIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGNRFVLSVIDHLIRFVVLIAIKDKEETTNARHPVEHVFSIFGTPETLHSDQVAEFENQLVEELQSVFGYK-TRTSACRPQGNSVQERMHSTVHNMMAMYSSVAFYIWADLLPFIQLVHNTSYSFMFTKPLTTFCSVVRPYYRLM---PFLASRNF----RTSNPA*LHAGYRREIVASL*VGAP*SQR----AADKQPEDNRQLSVPSFVVGDRGLLHRPPSESGGPDPKLASPWRGPYTVQTQMSPVTYRVSKNCEHTATTVHLGQMKP 6205 ++M E E+RPS GSPC IVAK+NGSPRFC+DY HTLNR I+RK+ P+ N+++CLDAVG A ++T+AD++SAFWQ+PVA+ VD AFVTH KY F R ++NA WLFQH M + LGHLGP+SG+L Y++ L+C++ FE +L S+E+MFAALQ A LTLKPSK++FG KE+ YLGHVISA GI V R+ +I D+ P+ +K+L S+LGM NFVRRF K YA++TAPLV L KDF R ++AWG QD AF + K L SA +LHFP FSREFVV+TDA E V +FLAQP+ + + +D+VAYYS RF QRHYS T+KEC+A W L+ ++G I C + H+QDTS ML RW+I Q+F FTVKH+PGKLNVVPD LSR+FSE + G+ +P EPRLAAICRNV DQ P AP EYEVS L+DIVPV++ R+ FSSA+SVFPV DTA++ ++ EF +F YL +P + +P + K + + FF++EG DQLVVP +LR VI HD P+SGGHLAFK GHRPVT F +AVDLVE KS+ GNRF+LSVIDHL RF++LI I KE T RH ++ VFS+ G PETLHSDQ EFENQLV+ELQ+VFGYK TRT+A RPQGNSV ER+H+TVHNM+AMYS++A IW++LLPF+QL HNT+YS + P+Y + P L F T P + R V +L + ++R DKQ +N +LS PSF +GD+ LLHRP +E+ GP+PKL SPW GP+TV++Q+SPV YRVSK + T TVHLG+MKP Sbjct: 43 EDMLEWGITEKRPSPWGSPCTIVAKSNGSPRFCIDYRHTLNRNIIRKTCPMPNLESCLDAVGDALYITVADILSAFWQIPVAEEHVDRTAFVTHNGKYCFKRMPFGVANAPWLFQHVMSIALGHLGPDSGVLLYMDNLICINRTFETHLVSIEKMFAALQAAGLTLKPSKIQFGRKEVDYLGHVISAKGIFVSTDRIDAIRDVSTPKCIKDLRSILGMANFVRRFAKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALYSALVLHFPDFSREFVVHTDASELGVGAFLAQPSKDSTGDKAVDIVAYYSKRFKAGQRHYSPTMKECTAVVW-ALTHWRPYLWGRQI-TCHTDHQALTYLYHMQDTSNMLTRWAICLQNFDFTVKHVPGKLNVVPDTLSRIFSE-IDGKPLPYEPRLAAICRNVPDDQPFRPPAPREYEVSASNLDDIVPVDTERELFSSAMSVFPVFDTAKLLDHQKKEFHQYFDYLDNPTKARVPLHQPKSSMSKFFIHEGEAL---------------DQLVVPDTLRKLVINVCHDLPASGGHLAFK-------------------------------------------GHRPVTNPFQVVAVDLVEYKSQSEGNRFILSVIDHLTRFLILIPIPSKEATVVVRHLIDRVFSVLGPPETLHSDQGREFENQLVKELQTVFGYKKTRTAAYRPQGNSVLERVHNTVHNMLAMYSNLACDIWSELLPFVQLAHNTAYSKTLEET---------PHYLVFGRAPTLPVELFLGVPATDAPQ-SRLDHSRRTVENLQLAYELARRNLKERTDKQAVENEKLSFPSFKMGDQVLLHRPYNETDGPNPKLVSPWHGPFTVRSQISPVIYRVSKPNDPTEVTVHLGRMKP 878
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE) HSP 1 Score: 767 bits (1981), Expect = 7.530e-243 Identity = 462/990 (46.67%), Postives = 573/990 (57.88%), Query Frame = 2 Query: 3563 EMPEMENIEERPST*GSPCCIVAKNNGSPRFCVDYWHTLNRYIVRKSWPLLNMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA-------W----FGLSFI---------------------------------------------------------GDCIFG----VGI*LCVPID----------------------HIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGNRFVLSVIDHLIRFVVLIAIKDKEETTNARHPVEHVFSIFGTPETLHSDQVAEFENQLVEELQSVFGYK-TRTSACRPQGNSVQERMHSTVHNMMAMYSSVAFYIWADLLPFIQLVHNTSYSFMFTKPLTTFCSVVRPYYRLMPFLASRNFRT-----SNPA*L-HAGYRREIVASL*VGAP*SQR----AADKQPEDNRQLSVPSFVVGDRGLLHRPPSESGGPDPKLASPWRGPYTVQTQMSPVTYRVSKNCEHTATTVHLGQMKP 6205 EM E IE+RPS GSPC +VAK NGSPRFCVDY HTLNR+IVRK+WP+ N+++CLDAVG A ++T+AD++SAFWQ+PVA+ VD AFVT KY F R ++NA WLFQH M + LGHLGP+SG+L Y++ L+C++ FEA+L SLE+MFAALQ A LTLKPSK++FG KE+ YLGHVISA GISV R+ +I +LP P +K+L SVLGM RVL S P+LHFP FSREFVV+TDA E V +FLAQP+ + + +LD+VA+YS RFSK QRHYSAT+KEC A W +G F GD + I VP D H+QDTS ML RW+I Q++ FTVKH+PGKLNVVPDALSR+FSE ++G+ VPSEPRLAAICRNV D+ P P +YEVS + L++ VES R+ FSSAVSVFPV D+ ++ ++ EF +F YL P SP+PS +SK + + FFL+EG+L RSY+P LR+R+ F D LV+P SLR VI+S HD PSSGGHLAFK DLVE KS GNR++LSVIDHL RFV+LI IK KE T R+ V+ VFS+FG PETLHSDQ EFEN+LV+ELQSVFGYK TRT+A RPQGNSV ER+HSTVHNM AMY ++A W++LLPF+QL HNT+YS TT P+Y + A S PA Y R V +L + ++R + KQ + N +LS PSF GD+ L+HRP +ES GP+PKL SPW GPYTV+ Q+SPV YRVSK E T TTVHLG+MKP Sbjct: 195 EMLEWGIIEKRPSAWGSPCTLVAKKNGSPRFCVDYRHTLNRHIVRKTWPMPNLESCLDAVGQALYITVADILSAFWQIPVAEEHVDRTAFVTPTGKYCFKRMPFGVANAPWLFQHVMSLALGHLGPDSGVLSYMDDLICINHTFEAHLSSLEKMFAALQAAGLTLKPSKIQFGQKEVDYLGHVISAKGISVSTDRIDAIRNLPTPTCIKDLRSVLGM------------------------------------------------RVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKECIAVVWALTHWRPYLWGRHFTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHMPGKLNVVPDALSRFFSEVNGDHVPSEPRLAAICRNVPDDKPFCPLSLAITNTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALSRIFSE-VNGDHVPSEPRLAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPSNQSKSSMSKFFLHEGLLCRSYIPAHLRRRAHFRDPLVLPSSLRTLVISSCHDLPSSGGHLAFK---------------------------------------------------------DLVEYKSLSEGNRYILSVIDHLTRFVILIPIKSKEATVVVRNLVDRVFSVFGPPETLHSDQGKEFENRLVKELQSVFGYKKTRTAAYRPQGNSVLERVHSTVHNMFAMYRNLACDNWSELLPFVQLAHNTAYS-------TTLQET--PHYLMFGRAAKLPVDLILGVPSTPAPQSRLDYSRRTVENLQLAYELARRNLKERSSKQADANEKLSFPSFKFGDQVLVHRPYTESAGPNPKLISPWHGPYTVRAQLSPVIYRVSKPNEPTETTVHLGRMKP 1069
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5LN90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN90_9PHAE) HSP 1 Score: 691 bits (1782), Expect = 1.320e-222 Identity = 354/606 (58.42%), Postives = 448/606 (73.93%), Query Frame = 2 Query: 3716 NMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA--WFGLSFIGDCIFGVGI*LCVP------IDHIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGNRFVLSVIDHLIRFVVLIAIK 5497 N+++CLDAVG A ++T+AD++SAFWQ+PVA+ VD AFVT KY F R ++NA WLFQH M + LGHLGP+SG+L Y++ L+C++ FEA+L SLE+MFAALQ A LTLKPSK++FG KE+ YLGHVISA GISV R+ +I +LP P +K+L SVLGMVNFVRR IK+YA++TAPLV L KD+ + +KAWG QD AF+ KRVL S P+LHFP FSREFVV+TDA E V +FLAQP+ + + +LD+VA+YS RFSK QRHYSAT+KEC A W L+ ++G + H+QDTS ML RW+I Q++ FTVKH+PGKLNVVPDALSR+FSE ++G+ VPSEPRLAAICRNV D+ P P +YEVS + L++ VES R+ FSSAVSVFPV D+ ++ ++ EF +F YL P SP+PS +SK + + FFL+EG+L RSY+P LR+R+ F DQLVVP SLR VI+S HD PSSGGHLAFK TFDK+R YWWPTM++DI++HV+SC+SCQR S P LPVGHRPVT+ F C+AVDLVE KS GNR++LSVIDHL RFV+LI IK Sbjct: 3 NLESCLDAVGQALYITVADILSAFWQIPVAEEHVDRTAFVTPTGKYCFKRMPFGVANAPWLFQHVMSLALGHLGPDSGVLSYMDDLICINHTFEAHLSSLEKMFAALQAAGLTLKPSKIQFGQKEVDYLGHVISAKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRAIKDYADVTAPLVELTRKDYVKRASFKKAWGSAQDAAFENVKRVLSSTPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDSADGKELDIVAFYSKRFSKGQRHYSATMKECIAVVW-ALTHWRPYLWGRHFTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALSRIFSE-VNGDHVPSEPRLAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPSNQSKSSMSKFFLHEGLLCRSYIPAHLRRRAHFRDQLVVPSSLRTLVISSCHDLPSSGGHLAFKGTFDKVRDRYWWPTMHSDITRHVQSCESCQRRKTSYRPPQLPVGHRPVTQPFQCVAVDLVEYKSLSEGNRYILSVIDHLTRFVILIPIK 606
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5JU37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU37_9PHAE) HSP 1 Score: 653 bits (1684), Expect = 1.710e-204 Identity = 376/861 (43.67%), Postives = 531/861 (61.67%), Query Frame = 2 Query: 3719 MDACLDAVGGASFLTIADVISAFWQLPVA-KNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSAW-FGLSFIGDCIFGVGI*LCVPIDH--------IQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPE-YEVSVHTLNDIVPVESYRDFFS-SAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGN-----RFVLSVIDHLIRFVVLIAIKDKEETTNARHPVEHVFSIFGTPETLHSDQVAEFENQLVEELQSVFGY-KTRTSACRPQGNSVQERMHSTVHNMMAMYSSVAFYIWADLLPFIQLVHNTSYS---------FMFTKPLTTFCSVVRPYYRLMPFLASRNFRTSNPA*LHAGYR--REIVASL*VGAP*SQRAADKQPEDNRQLSVPSFVVGDRGLLHRPPSESGGPDPKLASPWRGPYTVQTQMSPVTYRVSKNCEHTATTVHLGQMK 6202 M++ +D V GA ++T+ D+ SAF QLP+ +++ D AFVT K++F R I+NA +LFQ TM + H GP+SG+L Y++ L+C S+ +E +L LE F ALQ A LTLKPSK++FGPKE+ YLGH++S+DGI +G R+Q+I DLP P ++KEL SVLGMVN+VR+FI + A AP+V L K+ ++K + K WG D AF + K++L AP+LHFP FS+EFV++ DA E +FLAQ DL+++AY+S RF+KSQRHYSAT+KEC A + ++G CV DH +QDTS ML RW+I QSF F+V+H PGKLNVVPD LSRLF E E + P LA ICRNV D P Y++ L+++ PV S R+ F+ SA VF + ++ ++ DE+ + Y+ +++PLP +E++ T +++ L +G+LF+SYLPG LRKRS F DQ+V+P L V+ ++HD SGGHLAF+ T++KIR YWWP+M D+ CQ+CQR P LP GH PV + F ++VDLVE K+ + + ++VLS++DHL RF VL I +K T A +E + SIFG PE LHSDQ EFEN+++ +LQSV GY KTRT+ RPQGNSV ER+HST+H M++M+SS+ WA+LLP +QL +NTS++ MF + V+ + + F + L Y R+ + S+RAA + +++ P F G + LL++P +S GP+PKL PWRGPYT+ +Q+SPV YRV + E +VHL +K Sbjct: 4 MESHIDTVAGAKYITVCDIQSAFHQLPINDRHEQDKTAFVTRNGKWVFKRLPFGIANAPFLFQRTMALAFAHFGPKSGLLVYMDDLICCSSTWEGHLTLLENTFKALQAAGLTLKPSKVQFGPKEVKYLGHILSSDGIRLGDDRIQAILDLPTPTNIKELRSVLGMVNYVRKFIPDLATTIAPMVDLTKKE-SLKSIA-KLWGPEHDAAFAKVKKLLTEAPVLHFPDFSKEFVIHVDASETGAGAFLAQ-----RNGDDLNIIAYFSQRFNKSQRHYSATMKECYAVVLAIQHWRPYLWGRHF-TCVT-DHAALRYLYTMQDTSNMLTRWAIALQSFDFSVQHKPGKLNVVPDTLSRLFVFEKDQER--NTPTLAPICRNVPDDPKLQTAVPTRPYQLDADQLHNVRPVHSDRELFTVSATEVFQSVNHDKLREKQMDEYGDYIKYILH-ENAPLPDRETETTMSYYSLQDGLLFKSYLPGHLRKRSTFIDQIVLPQDLTGLVMHAYHDHALSGGHLAFRPTYEKIRQKYWWPSMSRDVRNWCLECQACQRRKTPHRRPKLPTGHVPVQQPFERISVDLVEYKTLSKSHTGVYCKYVLSMMDHLTRFAVLTPIPNKSAETVANVLIEKIISIFGPPEMLHSDQGTEFENKIIHQLQSVLGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHSSMERDNWAELLPMVQLAYNTSFNKTMHETPFFLMFGRQARLPVDVILGIPHVGSSADTEVFTKTTRENLQTAYELARQNL---------SERAAKQAAHNDKLPQFPVFQPGQQVLLYKPYHDSDGPNPKLLLPWRGPYTICSQLSPVVYRVKRPNETRELSVHLAHLK 843
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5JXY7_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY7_9PHAE) HSP 1 Score: 553 bits (1425), Expect = 8.730e-170 Identity = 312/655 (47.63%), Postives = 390/655 (59.54%), Query Frame = 2 Query: 3563 EMPEMENIEERPST*GSPCCIVAKNNGSPRFCVDYWHTLNRYIVRKSWPLLNMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLRISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA-------WFGLSFIGDCIFGVGI*LCVPIDHIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGNRFVLSVIDHLIRFVVLIAIKDKE 5506 EM E IE+R S G PC +VAK NGSPRFCVDY HTLNR+IVRK+WP+ N+++CLDAVG A ++T+AD++SAFWQ+PVA+ VD AFVT KY F R LTLK SK++F KE+ YLGHVISA GISV R+ +I +LP P +K+L SVLGMVNFVRRFIK+YA++TA LV L KD+ + +KAWG QD AF KRVL S P+LHFP FSREF V+TDA E V +FLAQP+ + +L++VA+YS RFSK QRHYS+T+KEC A W + G + H+QDTS ML RW+I QS+ FT+KH+PGKLNVVPDALSR+FS+ ++G+ VPSEPR AAICRNV D+ P P +YEVS + L++ VES R+ FSSAVSVFPV D+ ++ ++ EF +F YL P SP+PS +SK + + FFL+EG+L RSY+P LR+R+ F DQLVVP SLR VI+S HD PSSGGHLAFKA VDLVE KS GN ++LSVIDHL RFV+LI IK K+ Sbjct: 196 EMLEWGIIEKRTSAWGRPCTLVAKKNGSPRFCVDYRHTLNRHIVRKTWPMPNLESCLDAVGQALYITVADILSAFWQIPVAEEHVDRTAFVTPTGKYCFKR---------------------------------------------------------LTLKSSKIQFSQKEVDYLGHVISAKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTASLVELTRKDYVKRASFKKAWGSAQDAAFQNVKRVLSSTPVLHFPDFSREFAVHTDASEQGVGAFLAQPSHDIDDGKELNIVAFYSKRFSKGQRHYSSTMKECIAVVWALTHWRPYLWGRHFSCGTDHQALTYLYHMQDTSNMLTRWAIALQSYDFTIKHVPGKLNVVPDALSRIFSK-VNGDHVPSEPRFAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPSNQSKSSMSKFFLHEGLLCRSYIPAHLRRRAHFRDQLVVPSSLRTLVISSCHDLPSSGGHLAFKA-------------------------------------------------------VDLVEYKSLSEGNPYILSVIDHLTRFVILIPIKSKD 737
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5JK17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK17_9PHAE) HSP 1 Score: 499 bits (1285), Expect = 1.900e-153 Identity = 306/716 (42.74%), Postives = 386/716 (53.91%), Query Frame = 2 Query: 3566 MPEMENIEERPST*GSPCCIVAKNNGSPRFCVDYWHTLNRYIVRKSWPLLNMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA--WFGLSFIGDCIFGVGI*LC-------VPIDHIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGNRFVLSVIDHLIRFVVLIAIKDKEETTNARHPVEHVFSIFGTPETLHSDQVAEFENQLVEELQSVFGYK-TRTSACRPQG 5671 M E IE+RPS G PC ++AK NGSPRFCVDY HTLNR+IVRK+WP+ ++++CLDAVG A ++ +AD++SAFWQ+PVA+ VD AFVT KY R ++NA WLFQH M + LGHLGP+SG+L Y++ L+C++ FEA+L SLE+MFAALQ A LTLKPSK++FG KE+ YLGHVI A ISV R+ +I +LP P +K+L S YA++TAPLV L KD+ + + WG QD AF+ KRVL S P+LH P FSRE VV+TDA E V +FLAQP+ + + + D+VA+YS RFSK Q HYSAT+KEC A W L+ ++G C + H+QDTS ML RW+I Q++ FTVKH+P KLNVVPDALSR+FSE ++G V SEPRLAAICRNV D P P +YEVS H L++ VES R+ L+VDLVE KS GNR++LSVIDHL RFV+LI IK ++ R+ V+ VFS+FG P+TLHSDQ EFENQLV+ELQS FGYK TRT A RPQG Sbjct: 46 MLEWGIIEKRPSAWGRPCTLIAKKNGSPRFCVDYRHTLNRHIVRKTWPMPDLESCLDAVGQALYIIVADILSAFWQIPVAEEHVDRTAFVTPTGKYCLKRMPFGVANAPWLFQHVMSLALGHLGPDSGVLSYMDDLICINHTFEAHLSSLEKMFAALQAAGLTLKPSKIQFGQKEVDYLGHVIPAKDISVTTDRIDAIRNLPTPTCIKDLRS--------------YADVTAPLVELTRKDYVKRASLIEEWGPAQDAAFENVKRVLSSIPVLHLPDFSRELVVHTDASEQGVGAFLAQPSRDSADGKEFDIVAFYSKRFSKGQHHYSATMKECIAVVW-ALTHWRPYLWGRHF-TCSTDHQALTSLYHMQDTSNMLTRWAIALQNYDFTVKHVPWKLNVVPDALSRVFSE-VNGNPVLSEPRLAAICRNVPDDTPFCPPVPRDYEVSSHNLDETAFVESDRE---------------------------------------------------------------------------------------------------------------------------------------------------------------LSVDLVEYKSLSEGNRYILSVIDHLTRFVILIPIKSEKAVVVVRNLVDRVFSVFGPPDTLHSDQGKEFENQLVKELQSAFGYKKTRTVAYRPQG 585
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5K153_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K153_9PHAE) HSP 1 Score: 496 bits (1278), Expect = 1.570e-151 Identity = 265/532 (49.81%), Postives = 359/532 (67.48%), Query Frame = 2 Query: 3560 KEMPEMENIEERPST*GSPCCIVAKNNGSPRFCVDYWHTLNRYIVRKSWPLLNMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPA-CNPSKLGDLDVVAYYSHRFSKSQRHYSATVKEC-SAWFGLSFIGDCIFGVGI*LCVPIDH--------IQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPG 5113 K+M + + IEE PS GSP +VA+ +G PRFCVD+ T+N++++RK+WPL NM++ LD+VG A F+++ADV SA+WQ+PV + V+ AFVT+ KY + R + NA W+F LGH+ PE +L Y++ LSA FE +++SLE MF ALQ A LTLKPSK+ FGPK + YLGH+ISA+GISVGK R++++ +LP P+ LK+L SVLG+VNFVRRFI +YAEIT PLV L K++ K KAW D +F KR+L SAP+LHFP F REFVV+ DA E +FLAQP+ +P L D++AYYSHRF QRHYSA++KEC +S +FG V DH +QDTS ML RW+I Q++ FTVKH+ GKLNVVPD LSRLF E + E + +P LA+ICRNV D+ P P +YE+S +LND+ V + + F+SAVS+FPV D A++ + EF + Y++ P+++PLPS E+K T +++FLNE +LFRSYLPG Sbjct: 130 KDMLDDDIIEELPSQWGSPVTLVARKDGKPRFCVDFRSTVNKHLIRKTWPLANMESNLDSVGSAKFISVADVQSAYWQIPVHPDHVERTAFVTNSGKYCYKRMPFGVCNAPWIFTEMAHKTLGHI-PE--LLIYMDDFCVLSATFENHMKSLESMFVALQAAGLTLKPSKISFGPKSIEYLGHIISAEGISVGKDRIKAVQNLPTPRCLKDLRSVLGVVNFVRRFIPDYAEITNPLVELTRKEYATKSRFVKAWNKSHDASFAHLKRLLTSAPVLHFPDFDREFVVHVDASEHGCGAFLAQPSKADPESL---DMIAYYSHRFKHGQRHYSASMKECCGVVLAISHWRPYLFGKHF--TVITDHQALTHLFYMQDTSNMLTRWAIALQNYDFTVKHVAGKLNVVPDTLSRLFGE-IESETISHKPALASICRNVPSDRPYHPPGPRDYEISADSLNDVDIVHNDNELFASAVSLFPVLDPAKLRREQYKEFGPYIDYVKKPKTAPLPSSENKGTMSNYFLNENVLFRSYLPG 652
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5KUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM8_9PHAE) HSP 1 Score: 488 bits (1255), Expect = 2.710e-148 Identity = 283/635 (44.57%), Postives = 388/635 (61.10%), Query Frame = 2 Query: 3959 LVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSAW-FGLSFIGDCIFGVGI*LCVPIDH--------IQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPE-YEVSVHTLNDIVPVESYRDFFS------SAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGN-----RFVLSVIDHLIRFVVLIAIKDKEETTNARHPVEHVFSIFGTPETLHSDQVAEFENQLVEELQSVFGYK-TRTSACRPQGNSVQERMHSTVHNMMAMYSSVAFYIWADLLPFIQLVHNTSYS 5797 ++C S+ +E +++ LE+ F AL+ A LTLKPSK++FGPKE+ YLGHV+S+DGI +G R+++I DLP P+++KEL SVLG VN+V+RFI + A ITAPLV L KD +K + ++ WG D+AF K +L AP+LHFP FS+EFVV+ DA EA +FLAQ DL+++AY+S RF+KSQ+HYSAT+KEC A + ++G CV DH +QDTS ML RWSI QSF FT D L+ LA ICRNV D P ++VS + L+ + PV S R+ F+ SA VF D + + E+ + Y+ D + +PLP E+ T +++ + G+LF+SYLPG LRKRS FHDQLV+P L V+ ++HD SGGHLA + T+ KIR YWWPTM DI CQ+CQR P LP GH PV R F ++VDLVE K+ ++VLS++DHL R+ +L I +K T A+ ++ + S FG PE LHSDQ EFEN+++ +LQ++ GYK T T+ RPQGNSV ER+HST+H+M+AM+SS+ WA+LLP +QL +NTS+S Sbjct: 4 IICCSSTWEGHIDLLEKTFEALKAAGLTLKPSKVQFGPKEVKYLGHVLSSDGIRLGDDRIKAILDLPTPKTIKELRSVLGTVNYVKRFIPDLATITAPLVDLTKKDA-VKHVARR-WGPEHDQAFAEVKNLLTKAPVLHFPDFSKEFVVHVDASEAGAGAFLAQ-----QNGDDLNIIAYFSQRFNKSQQHYSATMKECYAVVLAIQHWRPYLWGKHF-TCVT-DHAALRYLYTMQDTSNMLTRWSIGLQSFDFT------------DRLTH---------------SLAPICRNVPDDPKLHTSIPSRPFQVSPNKLDSVQPVLSDRELFNVEPNFVSAAEVFQSVDHDMLCKAQAKEYGDYIQYILD-EEAPLPQTETATTMSYYSIQNGLLFKSYLPGHLRKRSTFHDQLVLPQDLTGLVMHAYHDHALSGGHLADRPTYAKIRQKYWWPTMARDIRNWCRKCQACQRRKTPHRRPKLPTGHLPVQRPFERISVDLVEYKTISMSAVGAPCKYVLSMMDHLTRYAILTPIPNKTAETVAKVIIDRIISTFGPPEMLHSDQGTEFENKVIHQLQTILGYKKTCTTPYRPQGNSVSERVHSTMHSMLAMHSSMGRDNWAELLPMVQLAYNTSFS 601
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5J8C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8C1_9PHAE) HSP 1 Score: 467 bits (1201), Expect = 1.240e-142 Identity = 278/600 (46.33%), Postives = 349/600 (58.17%), Query Frame = 2 Query: 3959 LVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSA---------------------------------------------------------PLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA--WFGLSFIGDCIFGVGI*LCVP------IDHIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNVSHDQWCSPRAPPEYEVSVHTLNDIVPVESYRDFFSSAVSVFPVGDTAQIAARRQDEFSAHFAYLRDPQSSPLPSKESKYTNNHFFLNEGMLFRSYLPGPLRKRSDFHDQLVVPGSLRARVITSFHD*PSSGGHLAFKATFDKIRVGYWWPTMYADISKHVESCQSCQR*NMSRCTPHLPVGHRPVTRVF*CLAVDLVERKSRLRGNRFVLSVIDHLIRFVVLIAIKDKEETTNARHPVEHVFSIFGTP 5563 L+C++ FEA+L SLE+MFAALQ A LTLKPSK++FG KE+ YLGHVISA GISV R+ +I +LP P +K+L SVLGMVNFVRRFIK+YA++TAPLV L K+ + +KAWG QD AF+ KRVL S P+LHFP FSREFVV+TDA E V +FLAQP+ + +LD+VA+YS RFSK Q HYSAT+KE A W L+ ++G + H+QDTS ML RW+I Q++ FTVKH+PGKLNVVPDALSR+FSE ++G+ VPSEPRLAAICRNV D+ P P +YEVS + L++ VES R+ FSSAVSVFPV D+ ++ ++ EF +F YL P SP+P +SK + + FFL+EG+L RSY+ LR+R+ F DQLVVP SLR VI+S HD PSSGGHL FKA VDLVE KS GNR++LSVIDHL RFV+LI IK K+ T R+ V+ VFS+FG P Sbjct: 4 LICINHTFEAHLSSLEKMFAALQAAGLTLKPSKIQFGQKEVDYLGHVISAKGISVSTDRIDAIRNLPTPTCIKDLRSVLGMVNFVRRFIKDYADVTAPLVELTRKNCIKRASFRKAWGSAQDAAFENVKRVLSSPVLHFPVFSREFVVHTDASEQGVGAFLAQPSRDIDDGNELDIVAFYSKRFSKGQGHYXPVLHFPDFSREFVVHTDASEQGVGAFLAQPSRDIDDGNELDIVAFYSKRFSKGQGHYSATMKEFIAVVW-ALTHWRLYLWGRHFTCSTDHQALTYLYHMQDTSNMLTRWAIALQNYDFTVKHVPGKLNVVPDALSRIFSE-VNGDHVPSEPRLAAICRNVPDDKPFCPPVPRDYEVSSYNLDETALVESDRELFSSAVSVFPVVDSVKLLDHQKREFRQYFDYLASPAKSPVPPNQSKSSMSKFFLHEGLLCRSYIAAHLRRRAHFRDQLVVPSSLRTLVISSCHDLPSSGGHLTFKA-------------------------------------------------------VDLVEYKSLSEGNRYILSVIDHLTRFVILIPIKSKDATVTVRNLVDRVFSVFGPP 546
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Match: A0A6H5K047_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K047_9PHAE) HSP 1 Score: 452 bits (1162), Expect = 5.020e-139 Identity = 237/417 (56.83%), Postives = 301/417 (72.18%), Query Frame = 2 Query: 3608 GSPCCIVAKNNGSPRFCVDYWHTLNRYIVRKSWPLLNMDACLDAVGGASFLTIADVISAFWQLPVAKNDVDSMAFVTHREKYIFLR----ISNALWLFQHTM*MILGHLGPESGILCYINYLVCLSAIFEANLESLEQMFAALQDAELTLKPSKLRFGPKEMAYLGHVISADGISVGKRRVQSINDLPKPQSLKELLSVLGMVNFVRRFIKEYAEITAPLVALMLKDFNMKRLCQKAWG*GQDEAFDRTKRVLQSAPLLHFPGFSREFVVYTDAFEADVCSFLAQPACNPSKLGDLDVVAYYSHRFSKSQRHYSATVKECSA--WFGLSFIGDCIFGVGI*LC-------VPIDHIQDTSKMLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAAICRNV 4819 G P K+NGSPRFCVDY HTLNR I+RK+ PL N+++CL AVG A ++T+AD++SAFWQ+PVA+ VD AFVTH KY F R ++NA WLFQH M + LGHLGP+SG+L Y++ L+C++ F+ +L S+E+MFAALQ A LTLKPSK++FG KE+ YLGHVISA GISV R+ +I DL P+ +K+L S+LGM NFVRRF+K YA++TAPLV L KDF R ++AWG QD AF + K L SAP+LHFP FSREFVV+TDA E V +F AQP+ + + +D+VAYYS RF QRHYS T+KEC+A W L+ ++G I C + H+QDTS ML RW+I Q+F FTVKH+PGKLNVVPD LSR+FSE + G+ +PSEPRLAAICRNV Sbjct: 2 GEPLYHCRKSNGSPRFCVDYRHTLNRNIIRKTSPLPNLESCLVAVGDALYITVADILSAFWQIPVAEEHVDRTAFVTHNGKYCFKRMPFGVANAPWLFQHVMSIALGHLGPDSGVLSYMDDLICINRTFKTHLVSIEKMFAALQAAGLTLKPSKIQFGRKEVDYLGHVISAKGISVSTDRIDAIRDLSTPKCIKDLRSILGMANFVRRFVKNYADLTAPLVDLTRKDFVKPRKFREAWGPDQDAAFQQLKDALSSAPVLHFPDFSREFVVHTDASELGVGAFPAQPSKDSTDDKVVDIVAYYSKRFKAGQRHYSPTMKECTAVVW-ALTHWRPYLWGRQI-TCHTDHQALTYLYHMQDTSNMLTRWAICLQNFDFTVKHVPGKLNVVPDTLSRIFSE-IDGKPLPSEPRLAAICRNV 415 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9362.17136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9362.17136.1 >prot_H-paniculata_contig9362.17136.1 ID=prot_H-paniculata_contig9362.17136.1|Name=mRNA_H-paniculata_contig9362.17136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp MLDRWSIQPQSFGFTVKHLPGKLNVVPDALSRLFSEELHGELVPSEPRLAback to top mRNA from alignment at H-paniculata_contig9362:2..7380- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9362.17136.1 ID=mRNA_H-paniculata_contig9362.17136.1|Name=mRNA_H-paniculata_contig9362.17136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7379bp|location=Sequence derived from alignment at H-paniculata_contig9362:2..7380- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9362:2..7380- >mRNA_H-paniculata_contig9362.17136.1 ID=mRNA_H-paniculata_contig9362.17136.1|Name=mRNA_H-paniculata_contig9362.17136.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1098bp|location=Sequence derived from alignment at H-paniculata_contig9362:2..7380- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |