mRNA_H-paniculata_contig9358.17133.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: D7FPL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL2_ECTSI) HSP 1 Score: 243 bits (621), Expect = 2.370e-74 Identity = 110/136 (80.88%), Postives = 117/136 (86.03%), Query Frame = 3 Query: 18 MDDAWNELNFDFEAAVETALPPSANANAGDFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSLVNPSSLSRGGAG 425
MDDAWNEL+FDFE AV+ ALPP++ N D RFRTQVCRHWLRGLCM GDSC +LHKMDR RMP+CRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCR GP CRFRHVK AREDCPE ADFSL NP+SL AG
Sbjct: 1 MDDAWNELSFDFEPAVQAALPPTSLGNTRD-RFRTQVCRHWLRGLCMIGDSCGYLHKMDRNRMPICRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLANPTSLHSNSAG 135
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A067BL61_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BL61_SAPPC) HSP 1 Score: 151 bits (382), Expect = 1.240e-43 Identity = 71/134 (52.99%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 24 DAWNELNFDFEAAV-------ETALPPSANANAGDFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSLVNPSS 404
D L FDFEAA+ TALP +A DF+ T VCRHWLRGLCMKGD+CEFLH+ D +MP CRW +CQV C FRH +++ ECA Y+QGFC G CR+RHVKL R++CP ADF L + ++
Sbjct: 8 DDEEALVFDFEAALPALLAAASTALPQDEDAKK-DFKRGTVVCRHWLRGLCMKGDNCEFLHQFDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYKQGFCSHGSACRYRHVKLPRDECPVIADFGLQSKAA 140
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A2D4CHV0_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHV0_PYTIN) HSP 1 Score: 157 bits (397), Expect = 2.170e-43 Identity = 72/125 (57.60%), Postives = 87/125 (69.60%), Query Frame = 3 Query: 36 ELNFDFEAAVETALPPSANANAG-------DFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSL 389
+L+FDFE + + S + +A DF+ T VCRHWLRGLCMKGD+CEFLH+ D RMP CRW +CQV C FRH ++E ECA Y+QGFC GP CR+RHVKLARE+CPE ADFSL
Sbjct: 14 QLSFDFEMLLPDDVDMSHDDDASTGPGGKKDFKRGTVVCRHWLRGLCMKGDNCEFLHQFDMARMPECRWGMECQVPECPFRHVPDEERVECAFYRQGFCSHGPNCRYRHVKLAREECPETADFSL 138
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A2D4CCY1_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCY1_PYTIN) HSP 1 Score: 157 bits (397), Expect = 1.140e-41 Identity = 72/125 (57.60%), Postives = 87/125 (69.60%), Query Frame = 3 Query: 36 ELNFDFEAAVETALPPSANANAG-------DFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSL 389
+L+FDFE + + S + +A DF+ T VCRHWLRGLCMKGD+CEFLH+ D RMP CRW +CQV C FRH ++E ECA Y+QGFC GP CR+RHVKLARE+CPE ADFSL
Sbjct: 30 QLSFDFEMLLPDDVDMSHDDDASTGPGGKKDFKRGTVVCRHWLRGLCMKGDNCEFLHQFDMARMPECRWGMECQVPECPFRHVPDEERVECAFYRQGFCSHGPNCRYRHVKLAREECPETADFSL 154
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A6S8YHI5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8YHI5_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.370e-41 Identity = 69/148 (46.62%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 24 DAWNELNFDFEAAVETALPP--------------------SANANAGDF------RFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSL 389
D ++EL FDFE + LPP + +A AG ++RT VCRHWLRGLCMKGD+CEFLH+MD RMP+CRW +C+++ C ++HE E + P+C YQQGFC GP+CR+RH K A + P ADFSL
Sbjct: 16 DDFDELVFDFEPFIADILPPMSITGHHQSEKARREAIERAAVSAPAGMSHQKLAEKYRTVVCRHWLRGLCMKGDNCEFLHQMDMDRMPVCRWGENCRIKDCPYKHEAEADKPQCVFYQQGFCYHGPECRYRHWKQAADKRPAIADFSL 163
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A8K1FJ65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ65_PYTOL) HSP 1 Score: 155 bits (393), Expect = 2.470e-41 Identity = 70/126 (55.56%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 21 DDAWNELNFDFEAAVETALPPSANANAG---DFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSL 389
D +L FDFEA + + + + DF+ T VCRHWLRGLCMKGD+CEFLH+ D +MP CRW +CQV C FRH ++E ECA Y+QGFC GP CR+RH+KLARE+CPE ADFSL
Sbjct: 9 DQEERQLVFDFEALLPDDVDMGDDRDENGKKDFKRGTVVCRHWLRGLCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFYKQGFCSHGPNCRYRHIKLAREECPETADFSL 134
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: F0W8E6_9STRA (Uncharacterized protein AlNc14C34G3076 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8E6_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.530e-40 Identity = 70/142 (49.30%), Postives = 87/142 (61.27%), Query Frame = 3 Query: 21 DDAWNELNFDFEAAVETALPPSANANAG-------------------DFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSL 389
D+ L FDFE + P +++N DF+ T VCRHWLRGLCMKGDSCEFLH+ D +MP CRW +CQV C FRH +++ ECA Y+QGFC GP CR+RH+KLARE+CPE ADF+L
Sbjct: 9 DEEEQHLRFDFELITQRNDPNDSHSNGTNTASGISRFLSNEDDGMKKDFKRGTVVCRHWLRGLCMKGDSCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYRQGFCSHGPNCRYRHIKLAREECPETADFAL 150
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A3R6W760_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6W760_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.710e-40 Identity = 70/129 (54.26%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 18 MDDAWNELNFDFEA---AVETALPPSANANAG--DFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSL 389
+DD N L FDFEA ++ + P G DF+ T VCRHWLRGLCMKGD+CEFLH+ D +MP CRW +CQV C FRH +++ ECA Y+QGFC G CR+RHVKL+RE+CP ADF L
Sbjct: 9 LDDEEN-LVFDFEAILPSLHESTPVILVDEDGKKDFKRGTVVCRHWLRGLCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYKQGFCSHGAACRYRHVKLSREECPVIADFGL 136
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: A0A1W0A9V3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9V3_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.570e-40 Identity = 71/134 (52.99%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 24 DAWNELNFDFEAAV-------ETALPPSANANAGDFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSLVNPSS 404
D L FDFEAA+ TALP +A DF+ T VCRHWLRGLCMKGD+CEFLH+ D +MP CRW +CQV C FRH +++ ECA Y+QGFC G CR+RHVKL R++CP ADF L + ++
Sbjct: 10 DEEESLVFDFEAALPALLAAASTALPQDEDAKK-DFKRGTVVCRHWLRGLCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYKQGFCSHGSACRYRHVKLPRDECPVIADFGLQSKAA 142
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Match: T0R8R3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R8R3_SAPDV) HSP 1 Score: 151 bits (381), Expect = 7.950e-40 Identity = 71/134 (52.99%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 24 DAWNELNFDFEAAV-------ETALPPSANANAGDFRFRTQVCRHWLRGLCMKGDSCEFLHKMDRKRMPLCRWRTDCQVEGCAFRHEEEQEAPECAMYQQGFCRSGPKCRFRHVKLAREDCPEFADFSLVNPSS 404
D L FDFEAA+ TALP +A DF+ T VCRHWLRGLCMKGD+CEFLH+ D +MP CRW +CQV C FRH +++ ECA Y+QGFC G CR+RHVKL R++CP ADF L + ++
Sbjct: 8 DDEEALVFDFEAALPALLAAASTALPQDEDAKK-DFKRGTVVCRHWLRGLCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEDRMECAFYKQGFCSHGSACRYRHVKLPRDECPVIADFGLQSKAA 140 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9358.17133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9358.17133.1 >prot_H-paniculata_contig9358.17133.1 ID=prot_H-paniculata_contig9358.17133.1|Name=mRNA_H-paniculata_contig9358.17133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=145bp MDDAWNELNFDFEAAVETALPPSANANAGDFRFRTQVCRHWLRGLCMKGDback to top mRNA from alignment at H-paniculata_contig9358:2624..6730- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9358.17133.1 ID=mRNA_H-paniculata_contig9358.17133.1|Name=mRNA_H-paniculata_contig9358.17133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4107bp|location=Sequence derived from alignment at H-paniculata_contig9358:2624..6730- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9358:2624..6730- >mRNA_H-paniculata_contig9358.17133.1 ID=mRNA_H-paniculata_contig9358.17133.1|Name=mRNA_H-paniculata_contig9358.17133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=870bp|location=Sequence derived from alignment at H-paniculata_contig9358:2624..6730- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |