mRNA_H-paniculata_contig9356.17131.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI) HSP 1 Score: 281 bits (720), Expect = 1.950e-89 Identity = 142/194 (73.20%), Postives = 163/194 (84.02%), Query Frame = 3 Query: 3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFG 584
DPD K+REEE R K +R+N+M CAHDRSAER+VMEM I EK+ ACR+FR +GN FH EGQYRR ALQYRQAL+YYDFCF D++ Q ELD+ RQACLLNSAACFL C EL Q LDCCYQ L+ EP+NVKALYRRAVV+R RD F+EA+ DL KALAQRPN+VMLRKESA+LKSK+A+YRER KAMGEQIFG
Sbjct: 32 DPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFG 225
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A6H5KB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB41_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.820e-57 Identity = 129/264 (48.86%), Postives = 153/264 (57.95%), Query Frame = 3 Query: 111 MEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQV--------------LQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFG-------------AGRVMAVSEEEISVSHPDLSPPDSLVDMS---------TGAMPSTGLGGDYRVADGIGVEFRDGSITGDQEEGRRRHDL 794
ME+ I EK+ ACR+FR GN FH EGQ A L+YYDFCF D + Q ELD+ RQACLLNSAACFL C EL Q LDCCYQ L+ EP+NVKALYRRAVV+R RD F+EA+ DL KALAQRPN+VMLRKESA+LKSK+A+YRER KAMGE IFG +G ++E D S P ++ A+ GG Y V + GS +G +EEGRR HDL
Sbjct: 1 MEVPIEEKISACRDFRQGGNLFHAEGQGSAA-------LIYYDFCFPDDDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCPLAHFLGRARALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEHIFGKEQGRDQDNARGSSGNNGRALQQESETQEKDGSEPSAVEAAEDDPYQCFAPAAAVGGNESGGGYAVTAAV---VPAGSGSG-KEEGRRWHDL 253
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A836CM33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM33_9STRA) HSP 1 Score: 163 bits (413), Expect = 5.940e-44 Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 3 Query: 78 CAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALA----QRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGA 587
C+HD SAE+R+M++S EK+ AC FR KGN F EEGQY+RA LQYRQAL+Y D+ F D E+Q LD+ R ACLLNSAACF+R ELG+ L+ C Q LQE P KALYRRA V+R +D F A ADL+ A + + LR E +L+++ Y ++A+G Q+FG+
Sbjct: 61 CSHDHSAEKRIMDLSEPEKVAACEAFRAKGNAFFEEGQYQRATLQYRQALIYCDYAFPDAGELQTRLDDVRLACLLNSAACFVRAGELGEALEACEQALQERPRCAKALYRRAQVYRLKDEFALAKADLAAAXXXXXPRAADAAALRHERMMLRARETCYGANARALGRQMFGS 234
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A7S2HHR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHR7_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.100e-35 Identity = 80/182 (43.96%), Postives = 117/182 (64.29%), Query Frame = 3 Query: 75 TCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLEL-DETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAGRVMAVSEEE 617
+C+HD S ER+V E+ + +K++A F +GN +EGQY A+ QY+ A+VYY++ F D+ + ++ + R C LNSAAC ++ + L+ CYQVL+EEP NVKALYRRA ++R RD F EA ADL A + PNDV LR+E L +K+ +YR + +AM + IF A + +EE
Sbjct: 44 SCSHDHSRERQVYELPLDKKIEAMDRFHLRGNILFDEGQYEMASEQYKSAMVYYEYTFPDEGSDEWDVVNRIRLVCNLNSAACNMKAGLYDEALNNCYQVLREEPLNVKALYRRAQMYRIRDQFSEAKADLLLAWRELPNDVQLRQEYLTLSNKIKSYRRKREAMAKHIFDAQKTRTRMQEE 225
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A662XSD5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSD5_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.820e-33 Identity = 84/201 (41.79%), Postives = 120/201 (59.70%), Query Frame = 3 Query: 3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQR-------PNDVMLRKESAILKSKMAAYRERSKAMGEQIFG 584
DP+ ++ + R +R + M C HD SAE+++M+MS EKL AC EFR GN F GQY+RAA Y +ALVY+++ F D EE ++ D + LLN AAC L+ L + Q LQ +PDNVKALYRRA +R +D F A+ D+S+AL +D +L +E A+L++KM AY+ R+K + +FG
Sbjct: 110 DPEELARQEQAARERSERAAKAQMGCNHDHSAEQKLMDMSTQEKLTACDEFRVLGNLFFRHGQYQRAAYNYHKALVYFEYVFPDTEEEDIQADALKLKLLLNFAACRLKTLHLDDAIHHANQALQLDPDNVKALYRRAQAYRLKDEFELASQDISRALELSGTSENAPTSDPLLVQEKALLQAKMLAYKLRTKQVSTAMFG 310
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A7S2RXA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXA3_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.340e-31 Identity = 75/189 (39.68%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 84 HDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAG----RVMAVSEEEISVSHPD 638
HD S+ER + E+ + K+ ++ GN F++EG Y RA ++YR AL YY++ F + + +D+ R C LNSAAC L+ L + LD C QVL EP+N+KALYRRA V+R D + EA D+++AL+ P+D R+E LK+KM AYR+ S + + + G A E+E+ V P+
Sbjct: 164 HDHSSEREIFELPLETKISRMEDYHSMGNLFYDEGLYDRAVIEYRSALAYYEYTFPEDDATWQLIDKLRLVCHLNSAACHLKLRMLQEALDDCNQVLYAEPENLKALYRRAQVYRHMDKYTEARRDITRALSLAPHDFQAREEFVRLKTKMHAYRQNSAILAKAMLHGGGGPPSPEAEDEDELEVKSPE 352
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A6A3FIC8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FIC8_9STRA) HSP 1 Score: 130 bits (328), Expect = 3.590e-31 Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 3 Query: 3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALA-------QRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAG 590
DP+ ++ +E R +R + M C HD SAE+++M+M+ HEKL+AC EFR GN F + GQY+RAA Y +ALVY+++ FTD LLN AAC L+ L + Q L+ + DNVKALYRRA +R +D F A D+++A+ + D ML +E +L++KM AY+ R+K + +FG G
Sbjct: 72 DPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTAHEKLRACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTLHLDDAVHHANQALEIDADNVKALYRRAQAYRLKDEFDLAQQDITRAIELSKAAGDSQSTDAMLVQEKTLLQAKMLAYKLRTKQVSAAMFGPG 274
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: H3GDM9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDM9_PHYRM) HSP 1 Score: 127 bits (319), Expect = 3.500e-30 Identity = 82/203 (40.39%), Postives = 118/203 (58.13%), Query Frame = 3 Query: 3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKAL----AQRPN---DVMLRKESAILKSKMAAYRERSKAMGEQIFGAG 590
DP+ ++ +E R +R + M C+HD SAE+++M+M+ EKL AC EFR GN F + GQY+RAA Y +ALVY+++ FTD LLN AAC L+ L + Q L+ +PDNVKALYRRA FR +D F A D+++A+ A N D +L +E +L++KM AY+ R+K + +FG G
Sbjct: 71 DPEDLARQEQEARERSERAAKAQMGCSHDHSAEQKLMDMTTLEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVHHANQALEIDPDNVKALYRRAQAFRLKDEFDLAQKDVARAMEISKAAEENQAADPLLVQEKKLLQAKMLAYKLRTKQVSAAMFGNG 273
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A329SRI4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329SRI4_9STRA) HSP 1 Score: 127 bits (320), Expect = 5.060e-30 Identity = 88/227 (38.77%), Postives = 125/227 (55.07%), Query Frame = 3 Query: 3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFR------EAAADLSKAL-AQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAGRVMAVSEEEISVSHPDLSPPDSLV 662
DP+ ++ +E R +R + M C HD SAE+++M+M+ EKL AC EFR GN F + GQY+RAA Y +ALVY+++ FTD LLN AAC L+ L + Q L+ +P+NVKALYRRA +R +D F E A +LSKA A + D +L +E +L++K+ AY+ R+K + +FG G E HP L PD+ V
Sbjct: 75 DPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVHHANQALEIDPNNVKALYRRAQAYRLKDEFDLAQKDIERAVELSKAAEATQSVDSLLIQEKKLLQAKVLAYKLRTKQVSAAMFGTGDKSKAPERY----HPGLRAPDANV 297
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A8J5IGV9_9STRA (SCP domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IGV9_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.560e-28 Identity = 87/225 (38.67%), Postives = 124/225 (55.11%), Query Frame = 3 Query: 3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFR------EAAADLSKAL-AQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAGRVMAVSEEEISVSHPDLSPPDS 656
DP+ ++ +E R +R + M C HD SAE+++M+M+ EKL AC EFR GN F + GQY+RAA Y +ALVY+++ FTD LLN AAC L+ L + Q L+ +P+NVKALYRRA +R +D F E A +LSKA A + D +L +E +L++K+ AY+ R+K + +FG G E HP L PD+
Sbjct: 492 DPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVHHANQALEIDPNNVKALYRRAQAYRLKDEFDLAQKDIERAVELSKAAEATQSVDSLLIQEKKLLQAKVLAYKLRTKQVSAAMFGTGDKSKAPERY----HPGLRAPDA 712 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9356.17131.1 >prot_H-paniculata_contig9356.17131.1 ID=prot_H-paniculata_contig9356.17131.1|Name=mRNA_H-paniculata_contig9356.17131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp MTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQback to top mRNA from alignment at H-paniculata_contig9356:4765..9145- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9356.17131.1 ID=mRNA_H-paniculata_contig9356.17131.1|Name=mRNA_H-paniculata_contig9356.17131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4381bp|location=Sequence derived from alignment at H-paniculata_contig9356:4765..9145- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9356:4765..9145- >mRNA_H-paniculata_contig9356.17131.1 ID=mRNA_H-paniculata_contig9356.17131.1|Name=mRNA_H-paniculata_contig9356.17131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at H-paniculata_contig9356:4765..9145- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |