mRNA_H-paniculata_contig9351.17124.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.250e-15 Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = -1 Query: 49 VDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWGVVDTWKGS 243 ++ PLL ALA +LAIP++QAQSER FS+AGL VT R+R+ ENVELLV LR WGVVD WK S Sbjct: 492 LEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKS 556
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 4.570e-13 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 49 AVDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWGVVDTWKGS 246 + D P L LA +LAIPATQA+SER FS AG IVTK RN ++P VELLV LR +W +V+ W+ S Sbjct: 151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 216
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.160e-12 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = -1 Query: 49 VDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWGVVDTWKGS 243 D P L LA +LAIPATQA+SER FS AG IVTK RN ++P VELLV LR +W +V+ W+ S Sbjct: 232 ADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 2.200e-10 Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = -1 Query: 49 LLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWGVVDTWKGS 207 +L IPA+Q QSER FSSAGL+VTK R RM PENVEL++ LR VD W G+ Sbjct: 429 VLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWNGN 481
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 1.120e-9 Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = -1 Query: 79 AVDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTT 246 A + P L +LA +L IPA QAQSER FSSAGL+VTK R RM PENV L+V LR T Sbjct: 488 AREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A820WCL7_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820WCL7_9BILA) HSP 1 Score: 54.7 bits (130), Expect = 6.030e-7 Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = -1 Query: 43 GKPAAVDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWGVVDTWKGSQA 258 G+ AA PLL LA L +IPAT +++ER FS +G+I+ R R+SP+ V+ ++ +R+ V+ T K + + Sbjct: 51 GEFAASKFPLLKCLARKLFSIPATSSETERLFSYSGIILNNRRQRLSPDQVDNMLVIRSARKVLTTLKNNDS 122
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A094I505_9PEZI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pseudogymnoascus sp. VKM F-4519 (FW-2642) TaxID=1420914 RepID=A0A094I505_9PEZI) HSP 1 Score: 55.8 bits (133), Expect = 8.060e-7 Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = -1 Query: 61 PRPGGKPAAVDI-----------PLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWG-VVDT 270 PRPG A DI P++ A+A LAIPAT A SER FS+ I+TK RNR+SPE + L+ LR WG ++DT Sbjct: 106 PRPG---PATDILKYWAAKQYQYPIIAAIARDHLAIPATSAPSERVFSNGANILTKKRNRLSPETLRYLLCLR-DWGHILDT 183
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A151I7T7_9HYME (Zinc finger BED domain-containing protein 1 n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=A0A151I7T7_9HYME) HSP 1 Score: 55.8 bits (133), Expect = 9.090e-7 Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = -1 Query: 61 KPAAVDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWGVVDT 255 K A P+L+ LA L IPA+ A SERTFS+AG IVT R+ +SPENV +LV L ++++ Sbjct: 151 KARADRFPILSNLARKYLCIPASSANSERTFSTAGNIVTSKRSCLSPENVSMLVFLYQNKSIIES 215
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: UPI0005F55F89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F55F89) HSP 1 Score: 56.2 bits (134), Expect = 9.620e-7 Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = -1 Query: 88 KPAAVDIPLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVAL 255 K A P L LA L+IPAT A +ERTFS+AG IVT RN +SPENV +LV L Sbjct: 213 KTRADKFPALAILARKYLSIPATSASAERTFSTAGNIVTPKRNCLSPENVNMLVFL 268
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Match: A0A094IHT3_9PEZI (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-4518 (FW-2643) TaxID=1420913 RepID=A0A094IHT3_9PEZI) HSP 1 Score: 55.8 bits (133), Expect = 9.760e-7 Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = -1 Query: 61 PRPGGKPAAVDI-----------PLLTALAWPLLAIPATQAQSERTFSSAGLIVTKARNRMSPENVELLVALRTTWG-VVDT 270 PRPG A DI P++ A+A LAIPAT A SER FS+ I+TK RNR+SPE + L+ LR WG ++DT Sbjct: 138 PRPG---PATDILKYWAAKQYQYPIIAAIAQDHLAIPATSAPSERVFSNGADILTKKRNRLSPETLRYLLCLR-DWGHILDT 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9351.17124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9351.17124.1 >prot_H-paniculata_contig9351.17124.1 ID=prot_H-paniculata_contig9351.17124.1|Name=mRNA_H-paniculata_contig9351.17124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp SLISHKEIFYKKSGGLRPLPCVHHTPRGPERDEKLDILRGHPVARLGDNQback to top mRNA from alignment at H-paniculata_contig9351:4191..4580+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9351.17124.1 ID=mRNA_H-paniculata_contig9351.17124.1|Name=mRNA_H-paniculata_contig9351.17124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=390bp|location=Sequence derived from alignment at H-paniculata_contig9351:4191..4580+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9351:4191..4580+ >mRNA_H-paniculata_contig9351.17124.1 ID=mRNA_H-paniculata_contig9351.17124.1|Name=mRNA_H-paniculata_contig9351.17124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=732bp|location=Sequence derived from alignment at H-paniculata_contig9351:4191..4580+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |