Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 62.0 |
Seed ortholog evalue | 2.8e-07 |
Seed eggNOG ortholog | 2880.D8LJ34 |
Hectar predicted targeting category | other localisation |
EggNOG OGs | 28NV4@1,2QVF4@2759 |
Ec32 ortholog description | conserved unknown protein |
Ec32 ortholog | Ec-27_006020.1 |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Exons | 3 |
Model size | 466 |
Cds size | 465 |
Stop | 0 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9347.17119.1 >prot_H-paniculata_contig9347.17119.1 ID=prot_H-paniculata_contig9347.17119.1|Name=mRNA_H-paniculata_contig9347.17119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp
AATLESVFGGVDASACINDQTDGRRDGGADGQSAQLRAMASQSGGDFLGR DGSAGMIRGYSLGLGAMFDQGFAPAPSVMTDSCIGGGTTNSGSGNWAGTP GSKGPLSRSVSVAPFLPPRRGLTPAEKHAYFIMLPATNDPAPGASHAAGD TPGKA back to topmRNA from alignment at H-paniculata_contig9347:3318..9222+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9347.17119.1 ID=mRNA_H-paniculata_contig9347.17119.1|Name=mRNA_H-paniculata_contig9347.17119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5905bp|location=Sequence derived from alignment at H-paniculata_contig9347:3318..9222+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GCGGCTACGTTGGAAAGTGTTTTCGGTGGGGTGGACGCGAGCGCATGTAT
AAATGATCAAACCGACGGTAGGAGGGACGGTGGTGCTGACGGACAGTCAG
CACAACTTCGAGGTGATGGATGATGATGATGATGATGATGATGATGATGA
TGATGATGATGATGATGACATAAGAAAAATATTTTTTTATTCAATTTTTT
AGTAGAGATTTTTTTTCACCCCGCGGACAAATACAAACGGAGTATTCGCT
ACTATCTCAAACTACCATTACTTGTCTAGGGTAAAACACGTGTTTTCATT
CGTTTACAAGTCTGTGAATGGTCACTCTACAGATGGTGAGCAGGTGGTCG
TATACCCCGGCGAATAGTCACAAATGCGGGTCCTGTTTATTTTCCGGATG
GTACTGTACTGATTGAATACTCTATCTGCCCGAGCTTTTCGATGCCCCAT
GGTATATCCAGTACAATGCATATTATTCGCGTCATATTCCCCCAACCTGA
ACATTTTTCTCATATTTATTCGGGTCTTGTATTCGTATTTGTCCGGGAGG
TGAGATGTTTTTCAAAGTGAATACGAGTCAAGATAACAAACAATAATCGT
GTACAACAAACACACAAAGTAAGAGAGGAGAGCACGTTCCTGAAGCATGC
TCTGCCTGCAAGGTTTTTTGTTACGTGACCAGCACGTTGTAATAGACACG
TGAACGAATGTGTGCACACTCAAGATTCAAGACGACAAGTACCGTTACAC
GGTGGATATGCATTGTAGGGGTGGCGGGGTAAGCGGGTGAATGACGGGGG
GGGGGGTACTTATGTGTGTATGGTAAGTAAACGTGCAACTTTTTTCACAG
GATTTTTTTTTCAATCCCTAAAATAGTCTCCATATTTCACCCATCGCGAT
AATCCCTCCCACTTGCCAAAGTTAGCAGGACTTAGCTATAATGCTCTATG
ACAACTCGATCATCGCATCCATGTTAAAGTAACCTAGGTCACCTCAAATT
CCAGTTGTGTCCATTTTGTCAAAATCATTGGATAATGACCAATAGGGGGT
GTGTACTCATGTATTGCATGCCGTAGTTGTTAGAACATCCATGACGCCTC
CTCGGAAGGACTGATGCATGCGAGGGGGTAGAGATCTTTTATTTGGTTTG
ACTATAATCGTGACATTTGTTGTGATTATTTCCTTCTTTTTTTTTCTTGA
TTTTTTTCTCATGACTATATTTAAGAAATGATAAATGGATGAGGACAAGA
TCCAGGTCTAATATCAAGAAGGAGTCATCACTATCGCTGCCTTGAAACGT
GTACCTGTTTCGGGGTACCAAACTCCATCCTTTTTTATTGCTCCTTTTGT
TACGATATACTATCGCAGCTCGACCGAATTGCCACTTAAATTGCGCCCAC
GGGTCTGAGAGATCGGCCTAATATGTAACAACAGTAAGTGGAAAAATATA
TATATTTGAAAGACTTTTTGTTCCCGGCAGTTTAGAAGCAATGCGTGACC
CACTGTCCTTCAACCAACCGTATACGCATGCTACGTACGTGTCGAAATCG
ACAAATCGGACACGACACTCGCTGATAGCCATGGCTTCGCAAAGCGGGGG
AGATTTTTTGGGCAGGGATGGAAGCGCAGGCATGATTAGAGGCTACAGCC
TCGGACTGGGAGCCATGTTTGACCAGGGCTTCGCTCCTGGTAAGAGATTT
CTTCCGTATTTTGGCGTTTCTACTTGAGGTTCCGGGGGAAATGGTATTGG
CTGCCGCATGGGTGGCCGTTTGATTGGGGTTTTTTTTCCCGACGTTTCAA
GCACTGTGAGATATCTGTGTGTGTGTGTGTGTGTGTAATGCATGTACATT
TTCCATGCACCACCGAACGGGCAAAATATACGAAGTATGGAAATACTATG
TCGCTGCCTAAGCTTAAAGAGGATGAGTGTGGAGGGTGATTGTGTGTAAA
CATGAGAGGTTTCCCCGCATTGAGGTCAAATTTCACGTTACATTGTGTGC
CCTGCTCAGTAGTTTAGCGTGAGCTCTTGTTTGCATCTCATTTGTCTCGT
GCTATTCATTTTTTTTTTACAGTTGAAGGAGAATAAATATATATATATAC
GAGCTGGTTCATGCATATGGTGCTCTTCACATCATTTCCAGTAACCCAAC
TTGTGAGCTACGTACTAGTGCACAACGTATCGGATCTGCAAAGCTGCAAG
TGTCTGGAAATTCCCCCCCAAAAATGGCGTCACGGCTTCATTTTCATTCT
GGAAGATCCCAAATGTAACTTTACACTTTCGTTGCCAAACTCGGAAGGAC
GTCGGCTCTAATCCAAAAAAAAAAATCTTCGACTTCGCGACCCGTACTGA
AGGCAATGTAATAAGACATTCGACCGCGGTGGCGACTCCTGTTGATAGAT
AGTCATGGATTTTCTCATGCCAATTTTTTCGATTTTTTTGTACGAATTAT
CATACATGTGTACCTTAGTTTGTTCCCTATGTCGACGCGTCGTTGCCGGT
TATAGTGACGATTTCCCTCACCGGTTTTCCGGCGTCCTCTGTCACCATAC
TGTCTAAAAATGCCTTGGGAACCCCCCCCCCAAAAAAAAAATAAAAACAT
CGGTGGAACAATGTGCGATGAGTACAAGCGACAAGCCTTCAACTTGGGAA
TTTTCATCCCGTATGAGAATTTTCGTTCCTTAAGTCACATTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTAACGCTGGCGCGGCCTATTCTGATGTCAGTG
TATAATAACGGATTTGGCCGCAGCCGTGAGCCCTCGTTATGGTTCTCAGA
TTTCTCTTTCGGTTTTCTCAAGTTTTTGGATGAAGCTTCGCGCAGGTGTT
CCTTGCTTGGTGCCCGAGGTCACCCGTTGTGGTCCTCTTTTTCTTTCGGT
TTTTGTGACCGGTTTTCTGGGGTTCTCATGTATTTTTTTCGGCCTAAAGC
TGGTCTCCAAAATTAAAAGAAAAAAAAAATACCAACATGGGGGTGACATC
GGGCACGAAGCAAAGTTTCGTCCAAAAACCCGAGAAAACCGAAAGGGAAA
TGTGAAAGCCAACCATTCTGGATTTGCGTCGTGAACCATCCTGTATTATG
CCGAACAATTATGAAAATTGTAGCAAAAATAACTTTGTAAGTTAGTTATA
GAGGGTCATTTCTACTGAACTAGGAACTTTTGGAGGGGCGCATATTTCAA
ATTTGAGCACTTTGGATCATTTCTTATGATTAAAATATGAAAAAAAAGTT
GTGGCGGATGAATAATATCCCATTTAATTTTATTTTTTTTCAGAATTCAT
TCAAAATCTACGGAATTTTTGTCGGCTCTTGACGTCCGTCCCTCCGAAAT
TTCAATTTTTCGTCACTTTCAAATATTTTCAAGCGCAATGCGCCCCATCA
ACCTTGGACAACAGGTGCCAGCCACAGCGGTTGGGGTCCTTGTGACCTTC
GTACTTGAAGGAGCACTGGACCAACACCAGCAAGTCCGACTTTCCAAAGA
ACTGTTGTGTGCGTGTTTGGGGGTGCTTTAGTTCGGTGCCTGTATCGTCT
GAACAATGCGCGTCTTTAGTGCTGCTAATTTAGAACTGCAGGCGCTTTTT
TGAATCCCTCGCTATCGACAAGAGCCGCTTCTTTTATGGGGGTGCAAGAT
TCAACGCTTGTATCTTTTATGGTACTAATTCAACGATACAGTCTGCGAAG
AGTTTAGCCAATTTTGGACAAATTTGAGGAATTCTCGCGGCAGACGCCAT
TTATCGAGCGCGACGCGACGCGCCCAATATTTTGGAATTCCTGCAAGAAT
GATGGTTGCAGAAATGAAATAATGGCCCTGGTCTGTAATTATGGCGAGAC
TTTGGAACATTTTTTCAATTTATATATACATTTGTGTTCGAAGTTTTGTC
GCAATTTTTGTTCGTGTAATTTTTTCATTTTTTTTTTTTTCCCACTTAGC
CATGTCACAATCTGAACAATCCGCAGTACGGCACATATTTACTTGTACTA
GAGATATTTTTCACGTTCGATTTATGGTACTCCTATTCGACCCGCTTAAG
TGGCTGACTGTGTGCAAAGGCACTCGAGTGTATAAAGAGGTTTCTGTTGA
TGTATCACAAGAGCTGACTGTGCATTACTGTGTATTATTGTAACTGAATA
TGCTGCCTGTGTTAGTACCTATATAGTTGGGTGTGCTGCATCAGTAGTAC
GGTGCTATGTGACTGTATGTGCTGGAGTGGGGGATGCCGCGTGCTTTCCT
ATGGTGCGTGTTGTCGTCATTGACACCGTGCGGTATATTGCGGTTTCTTG
CACTGTACTTTCGTCCTCCACACTATTTTACTGCAATAATAACGGTCATT
ATTTGTGCCTCACCATGAAGATGCGTACATCCCGCCCAGGAATAACCAAC
ATGCAAAATATTGACACATGAACGAGGATACAACAAGCGCTTCAAAATGA
CAACCTTTTGCTCTTCAACAAGATAAGACAAGACAAGCGCGGCGTGTGAC
AAATTTGGATGATGACATCAAGGTCCAAGATCACACTACTTTTTTTTTTT
TTTAACATAGATGACTTTCTTTTTTTTTTAACCCTCGGAAGGCTAAGGCA
AAAAACCTCTATCCGATGCTTCCATACTTCAGTATTTTTTACCGAAGTAT
GTCTACATTTCCTTTAACAGAACAGAGTTATTTATTCCTCTGTGGGGTAG
GCGCCACCCCGGTTCGGCCGAACCAGATAGGCAGTGTGGGGGTTGCACCC
ACTAAAAGACCTCTGACTAGACTTCCAGTCATGCTCAGTTCACGAGCTAC
CCTACCCGTTCGGGCGTAGGTTCGTGGATAGGTGACTTGTACTCCGAATT
GCCTTTTTATTCCCCCGCATCGTGACGAAGATGGATAATGGATATCTTGT
ATAATGGATATCTTGTATAATGGATATCTTGTATAATGGATATCTTGTAT
AATGGATATCTTGTATAATGGATATCTTGTATAATGGATATCTTGTATAA
CGGATATCTTGTATAACGGATATCTTGTATAATGGATATCTTGTATATCC
CCCACACCTTGCATAACTGGAAAACAACCTCTGATGCGATCACATCTTGG
ACTTGTTTTGTCTCTGGCACTCTTTGGATTATAATTGCTTACTCTTTCTC
CCCCCCCCCCGCGTGTGCTTAATTTGGTGCATCTATCAATAAATCGGTGG
AGAATATGAAACATTACTGGTGAGAAGCCTCTTTGTCACTGAATTGCAGT
TCTTTTCTCTCTCTTGTGTTGTTGTGTTATCAATATCGTCTCTTTGCACA
AGCGTGCCTCTTGTGTCACTTGCTGTAAAGGACCTATCCATACCTACTGA
CCGTTGTTGTTGCGGTGTAGTGCACCTGATGACGTGTAGAAGTGAATCCT
GCTCCTACATTTGCCTTCTGCATGAAATACCTAACGCTTGACGCGACAAA
AACGTTCATGTTGTATTTATTAATAATCACGGGTCACAGTAAAAACCCTC
AAAATGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAA
AATGACTCCAGTATACAGTATATATGAAACGCCCCCCTCTCCTGGCGATT
TGTCTTGTTTGAAACGGTAACAAACCAAAACCACACCGAACCGAACCGAA
CCGAATCAAACAGCCCCCAGCGTGATGACCGACAGCTGCATCGGCGGCGG
AACAACAAACTCAGGTTCAGGGAACTGGGCTGGGACACCGGGGTCCAAGG
GCCCATTGTCACGCTCGGTCAGCGTAGCGCCCTTTCTACCGCCTAGACGA
GGGCTCACACCTGCAGAGAAACATGCCTACTTCATCATGCTCCCGGCTAC
CAACGATCCCGCTCCTGGGGCTTCTCATGCTGCAGGAGACACGCCTGGGA
AGGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig9347:3318..9222+ >mRNA_H-paniculata_contig9347.17119.1 ID=mRNA_H-paniculata_contig9347.17119.1|Name=mRNA_H-paniculata_contig9347.17119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at H-paniculata_contig9347:3318..9222+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GCGGCTACGTTGGAAAGTGTTTTCGGTGGGGTGGACGCGAGCGCATGTAT AAATGATCAAACCGACGGTAGGAGGGACGGTGGTGCTGACGGACAGTCAG CACAACTTCGAGGCGGCTACGTTGGAAAGTGTTTTCGGTGGGGTGGACGC GAGCGCATGTATAAATGATCAAACCGACGGTAGGAGGGACGGTGGTGCTG ACGGACAGTCAGCACAACTTCGAGCCATGGCTTCGCAAAGCGGGGGAGAT TTTTTGGGCAGGGATGGAAGCGCAGGCATGATTAGAGGCTACAGCCTCGG ACTGGGAGCCATGTTTGACCAGGGCTTCGCTCCTGCCATGGCTTCGCAAA GCGGGGGAGATTTTTTGGGCAGGGATGGAAGCGCAGGCATGATTAGAGGC TACAGCCTCGGACTGGGAGCCATGTTTGACCAGGGCTTCGCTCCTGCCCC CAGCGTGATGACCGACAGCTGCATCGGCGGCGGAACAACAAACTCAGGTT CAGGGAACTGGGCTGGGACACCGGGGTCCAAGGGCCCATTGTCACGCTCG GTCAGCGTAGCGCCCTTTCTACCGCCTAGACGAGGGCTCACACCTGCAGA GAAACATGCCTACTTCATCATGCTCCCGGCTACCAACGATCCCGCTCCTG GGGCTTCTCATGCTGCAGGAGACACGCCTGGGAAGGCCCCCCCAGCGTGA TGACCGACAGCTGCATCGGCGGCGGAACAACAAACTCAGGTTCAGGGAAC TGGGCTGGGACACCGGGGTCCAAGGGCCCATTGTCACGCTCGGTCAGCGT AGCGCCCTTTCTACCGCCTAGACGAGGGCTCACACCTGCAGAGAAACATG CCTACTTCATCATGCTCCCGGCTACCAACGATCCCGCTCCTGGGGCTTCT CATGCTGCAGGAGACACGCCTGGGAAGGCC back to top
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