mRNA_H-paniculata_contig9332.17112.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A6H5JTR4_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTR4_9PHAE) HSP 1 Score: 190 bits (483), Expect = 2.890e-52 Identity = 125/257 (48.64%), Postives = 143/257 (55.64%), Query Frame = 1 Query: 13 QGWRAGMEDAHIALMRVPKGSPPSSKEIAVARISAFERHPNHRNTHQHNTARTKVPLGDSNSPN--ITALAGANYLGWVSEEPPSASGDGFPYPFARVRSSTYSAGDSEEESLPHPPTNVIVLPPXXXXXXXXXXXXXXXXXXXXSAVAGSSGNXKGR------SAKGGDNGGGPSTAVAGWKAVDLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEKAGGWGG 759
QGWRA MEDAHIAL++VP G PP+S I ARI F N H H K PL S S ITA+ +N PSASG AR R+ T+SAGD+ S GS+G KGR S G S+ AGWKAVDLLEDAALFGVFDGHGGKAVA+FC++RLPGLLAASP+IRAG+W+ GFP+VYHALD LL SG+GQEK GGWGG
Sbjct: 20 QGWRASMEDAHIALLKVPHGQPPTSAAIGAARIGLF-------NNHSH-----KPPLRSSGSRGSVITAVGDSNG--------PSASGA----QAARRRAETFSAGDTGGLSQ-------------QGRLKDETGSQQTAAISREGPRRGSTGAVKGRTGFAAASXXXXXXXDGSSSVGAGWKAVDLLEDAALFGVFDGHGGKAVADFCKERLPGLLAASPDIRAGNWRDGFPRVYHALDALLKSGEGQEKTGGWGG 239
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A812W3T3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W3T3_9DINO) HSP 1 Score: 59.7 bits (143), Expect = 1.510e-7 Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 1 Query: 544 DLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEK 741
DL AL+GVFDGHGG AVAE +RLP +L PE G++++ Q + D L S G+ +
Sbjct: 12 DLPRGLALYGVFDGHGGSAVAEIVAERLPQILRQLPEYARGEYQEALKQAFLEQDDFLRSKAGRAR 77
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A7S2GID4_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GID4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.810e-7 Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 1 Query: 550 LEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLL 717
L ++F VFDGHGGK VA+FCR R+P AS E + GD +V+H +D++L
Sbjct: 48 LPRVSMFAVFDGHGGKEVAKFCRARMPNEFMASQEFKDGDIGTALVKVFHRMDEML 103
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A812U3R4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812U3R4_9DINO) HSP 1 Score: 60.1 bits (144), Expect = 7.930e-7 Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 1 Query: 544 DLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEK 741
DL AL+GVFDGHGG AVAE +RLP +L PE G++++ Q + D L S G+ +
Sbjct: 19 DLPRGLALYGVFDGHGGSAVAEIVAERLPQILRQRPEYARGEYQEALKQAFLEQDDFLRSQAGRAR 84
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A5J4YVU6_PORPP (Protein phosphatase 2C-like 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVU6_PORPP) HSP 1 Score: 59.7 bits (143), Expect = 1.120e-6 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1 Query: 517 TAVAGWK---------AVDLLEDA----ALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLL 717
+A+ GW+ A+D L D ALFGVFDGHGG+ VA FC + LA+ + GD++ P+++H +D +L
Sbjct: 27 SAMQGWRISMEDAHIAALDGLSDGKKNVALFGVFDGHGGREVALFCERYMARELASLESFQQGDYETALPELFHRMDNML 106
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A087SD04_AUXPR (Protein-serine/threonine phosphatase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SD04_AUXPR) HSP 1 Score: 59.7 bits (143), Expect = 1.190e-6 Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 1 Query: 544 DLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEK 741
D ALF VFDGHGG+AVA F LPG + A+ AGD + Y LDQL+ + GQE+
Sbjct: 47 DTSTKTALFSVFDGHGGRAVAHFAAKYLPGRIMATKAYAAGDLGAAVAEAYLELDQLMDAPAGQEE 112
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A3M7KRP0_AUXPR (Protein-serine/threonine phosphatase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KRP0_AUXPR) HSP 1 Score: 59.7 bits (143), Expect = 1.440e-6 Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 1 Query: 544 DLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEK 741
D ALF VFDGHGG+AVA F LPG + A+ AGD + Y LDQL+ + GQE+
Sbjct: 513 DTSTKTALFSVFDGHGGRAVAHFAAKYLPGRIMATKAYAAGDLGAAVAEAYLELDQLMDAPAGQEE 578
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A1Q9ERC1_SYMMI (PPM-type phosphatase domain-containing protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9ERC1_SYMMI) HSP 1 Score: 59.7 bits (143), Expect = 1.590e-6 Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 1 Query: 544 DLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEK 741
DL AL+GVFDGHGG AVAE +RLP +L PE G++++ Q + D L S G+ +
Sbjct: 402 DLPRGLALYGVFDGHGGSAVAEIVAERLPQILRQLPEYARGEYQEALKQAFLEQDDFLRSKAGRAR 467
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A7S0ZJ48_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJ48_9RHOD) HSP 1 Score: 57.0 bits (136), Expect = 2.960e-6 Identity = 26/77 (33.77%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 514 STAVAGWKAV---------DLLEDAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLL 717
++A+ GW+ D E+ +LF VFDGHGG+ VA FC+ +P L A RAG++++ +V+ +D ++
Sbjct: 26 ASAMQGWRVSMEDAHIAMPDFAENQSLFAVFDGHGGREVALFCKRHMPRELRALESYRAGNYEQALTEVFLRMDVMI 102
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Match: A0A812NH60_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812NH60_9DINO) HSP 1 Score: 55.1 bits (131), Expect = 6.920e-6 Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 Query: 556 DAALFGVFDGHGGKAVAEFCRDRLPGLLAASPEIRAGDWKKGFPQVYHALDQLLLSGKGQEK 741
+ ALFGVFDGHGG AVA+ +R P L A P + G + + + + LD L S G+EK
Sbjct: 11 ELALFGVFDGHGGVAVAKVAAERFPETLRALPAFKQGRYSEALYESFLKLDSFLDSPAGREK 72 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9332.17112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9332.17112.1 >prot_H-paniculata_contig9332.17112.1 ID=prot_H-paniculata_contig9332.17112.1|Name=mRNA_H-paniculata_contig9332.17112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp MICRQGWRAGMEDAHIALMRVPKGSPPSSKEIAVARISAFERHPNHRNTHback to top mRNA from alignment at H-paniculata_contig9332:1929..4301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9332.17112.1 ID=mRNA_H-paniculata_contig9332.17112.1|Name=mRNA_H-paniculata_contig9332.17112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2373bp|location=Sequence derived from alignment at H-paniculata_contig9332:1929..4301- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9332:1929..4301- >mRNA_H-paniculata_contig9332.17112.1 ID=mRNA_H-paniculata_contig9332.17112.1|Name=mRNA_H-paniculata_contig9332.17112.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig9332:1929..4301- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |