mRNA_H-paniculata_contig933.17110.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig933.17110.1
Unique NamemRNA_H-paniculata_contig933.17110.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: D7FRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF6_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.710e-78
Identity = 123/174 (70.69%), Postives = 147/174 (84.48%), Query Frame = 1 
Query: 1423 ASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRVHVFM 1944
            ASLDR+V+LWDAR +GAGTG + IGGM  +AE+PHFRSVNSAHFSP+GEW+ATV QDDK+RLY+D+  +A+ +Q S S V  LPHNNQTGRWLTKFQASWDPKS+ LFAIGSMQ+ PHG+HLYSV  G K  +PSAV +TGGD+M SIQS+  FHP R+V+AGVNSSGR H+FM
Sbjct:    9 ASLDRSVRLWDARNVGAGTGSSGIGGMQHVAELPHFRSVNSAHFSPTGEWMATVCQDDKIRLYQDLG-SASGKQVSASQV--LPHNNQTGRWLTKFQASWDPKSKGLFAIGSMQKYPHGIHLYSVNGGAK--KPSAVEVTGGDVMGSIQSVVAFHPSRDVLAGVNSSGRAHIFM 177
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: D7FRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF7_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 2.420e-61
Identity = 122/213 (57.28%), Postives = 152/213 (71.36%), Query Frame = 3 
Query:  408 GPSAYELERLEKIRRNAEVMASLGLGTGKGGMRTTVDSDAAKRAKARGLKATSRKPPQKRERTRESSRLRGFSPEGLPMADPEAAFTKSKKRTFSHTTEALVEPPLAYHSSRISGDVSMESSNSSADGTLQLRQAGMLGGLVGRYGVDDDDTDYELAKPDEALTRYGTVHVAEAGVCKVVTERAYSISWHPSSAKLLVAVGDKIGNVGMWDMD 1046
            GPSAYEL+RL K++ NA +MASLGLG  K  MR  V+SDAA+RAKARGL     K    R  +RES+R+RG +PEGLPM DPE AF + ++   +  T A         S RI GDVSME++NS+ DGT++LRQ  M+GGLVGRY  D ++ DYELA+PD+AL R   + V E GVCKVV ERAYS +WHPS  KLL+AVGDK+GNVG+W +D
Sbjct:   69 GPSAYELQRLAKMKENAMMMASLGLGGAKDNMRKAVNSDAAQRAKARGLGPRPNKVYPAR--SRESARVRGKTPEGLPMEDPEEAFNRRRQGFGAQGTAAAXXXXXXPRSPRIEGDVSMEATNSTLDGTVRLRQ--MMGGLVGRYDRDGNEEDYELAEPDDALKRLSCLKVEETGVCKVVRERAYSTTWHPSGDKLLLAVGDKVGNVGLWTVD 277
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: K3W540_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W540_GLOUD)

HSP 1 Score: 210 bits (534), Expect = 6.740e-57
Identity = 122/294 (41.50%), Postives = 169/294 (57.48%), Query Frame = 1 
Query: 1060 VYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEMDDVIITYSHLLGEERLLLLSDGDGGITAVDLRTNQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRVHVF 1941
            V  ++PH   + +L F P D  KL+S S+DGS+R  D++ GAF +    +Y  +  DDV IT   L  E    L+S  DG + +VD R +Q+     +   HEKK NTVH HP  R    TASLDRTV LWD+R+L     +       P+  MPH RSVN A+FSP+G+ L TVG D+ + L+   + A   +  SV+P  ++PHNNQTGRWLTK  A+WDPK +  F IG MQ+ P  + L+      K TR + +     +   S+ S+ VFHP  + I G NSSGR+ ++
Sbjct:  228 VVMYRPHTLPITQLHFAPEDSTKLVSASFDGSIREFDLKAGAFSE----LYGTQ--DDVGITSMTLDIEHNAYLISCDDGHVCSVDRRESQK--NASRFLLHEKKINTVHQHPEFRFCLATASLDRTVCLWDSRKLSKSNNK-------PLVTMPHERSVNCAYFSPTGDHLVTVGLDNYVNLFNTGD-AKHHDAHSVAPTLAIPHNNQTGRWLTKLHATWDPKHKDRFVIGCMQQ-PRRIQLF------KATRKNPIQELTSEYFNSVHSINVFHPTLDAICGGNSSGRLSLW 498
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: A0A5D6XZ84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ84_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.060e-49
Identity = 117/278 (42.09%), Postives = 150/278 (53.96%), Query Frame = 1 
Query: 1099 LDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEMDDVIITYSHLLGEERLLLLSDGDGGITAVDLRTNQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRV 1932
            L F P D  KLLS SYDGSVR  D+   AF +    ++     DD  IT   +   E  LL+S  DG + AVD R    A   +    H+KK NTVH HP       TASLDRTV LWDARQL             P+  MPH RSVN A+FSP GE L TVGQDD + ++   + A   +  SV+P  ++PHNN TGRWLTK  A+WDPK +  F +G MQ+ P  + ++         R + +     +   S+ S+ VFHP  + I G NSSGR+
Sbjct:  305 LHFAPRDAAKLLSASYDGSVREFDLAAAAFSE----LFGTR--DDAGITSMAVDRNETALLVSCDDGAVWAVDPRQAPAAHAQFL--LHDKKINTVHRHPALPFCLATASLDRTVCLWDARQLRKSKN-------APLVTMPHRRSVNCAYFSPDGEHLVTVGQDDYVNVFATGD-AQHYDAHSVAPTLAIPHNNATGRWLTKLHAAWDPKRKDQFVLGCMQQ-PRRLQIFQA------ARKNPIQELTSEYFNSVHSINVFHPTLDAIVGGNSSGRL 559
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: A0A836C879_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C879_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.130e-49
Identity = 87/173 (50.29%), Postives = 112/173 (64.74%), Query Frame = 1 
Query: 1423 ASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRVHVF 1941
            ASLD TV LWDAR +G       +    P+A +PH RSVNSAHF+P+G +L T  QDD+L LY  +  AAA  +S       + HNNQTGRWLTKFQA WDPK+  LF  GSM +GPHG+  ++  +      P A  L GG++MTSIQS+   HP+  ++AG+N+SGR HVF
Sbjct:    1 ASLDTTVCLWDARNMGKHHSAPKVSARKPLATLPHARSVNSAHFAPAGAYLVTTCQDDRLHLYDTLAFAAALGES-------IAHNNQTGRWLTKFQAVWDPKASDLFVCGSMSKGPHGIDAFNATAAAAGKPPIATRLEGGEVMTSIQSVVACHPRLPLVAGINASGRCHVF 166
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: A0A2D4C066_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C066_PYTIN)

HSP 1 Score: 191 bits (486), Expect = 1.510e-49
Identity = 116/291 (39.86%), Postives = 150/291 (51.55%), Query Frame = 1 
Query: 1060 VYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEMDDVI-ITYSHLLGEERLLLLSDGDGGITAVDLRTNQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGR 1929
            V  ++PH   V  L F      KLLS S+DG+VR  D+    F +    ++A E    V  +          + LLS  DG +  VD R   +     + + HEKK NTVH HP   H   TASLDRTV LWD R+L             P+  MPH RSVN A+FSPSGE L TV QDD  R++   + A    +   +P   +PHNNQTGRWLTK  A+WDPK    + +G MQ+ P  + ++        TR + +     D   S+ S+ VFHP  NVIAG NSSGR
Sbjct:  295 VVMYRPHTLPVTALHFHREHASKLLSASFDGTVREFDLTAAKFTE----LFAVESGTGVTSMAVGGASTSPDVFLLSCDDGVVCRVDRRVASKPT-TTRFELHEKKINTVHVHPTAEHCLATASLDRTVSLWDVRKLSKSKN-------TPLVTMPHTRSVNCAYFSPSGEHLVTVCQDDYNRVFETADLA----KLPTTPALRIPHNNQTGRWLTKLHAAWDPKRPTQYVVGCMQQ-PRRVQIFDA------TRKAPIQELTSDWFASVHSINVFHPSLNVIAGGNSSGR 562
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: A0A8K1CSD2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSD2_PYTOL)

HSP 1 Score: 189 bits (479), Expect = 9.110e-49
Identity = 115/291 (39.52%), Postives = 153/291 (52.58%), Query Frame = 1 
Query: 1060 VYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEMDDVIITYSHLLGEERLLLLSDGDGGITAVDLRTNQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRV 1932
            V  ++PH   + +L F   D  KLLSTS+D S R  D++   F +     +A    D   +T   L  +    L S  DG +  +D R     +  +    HEKK NTVH HP++   F TASLDRTV LWD+RQL   T         P+  MPH RSVN A+FSP+G  L TVGQD+   +Y D   A+      V P   + HNNQTGRWLTK  A+WDPK    + IG M++ P  + ++        TR S +     +   S+ S+ VFHP R+ IAG NSSGR+
Sbjct:  264 VVMYRPHTLPITQLHFAANDQTKLLSTSFDSSAREFDLQAAKFTEW----FATP--DGAGLTSLALTAQPTNWLASADDGKVWVLDRRLESTKQSHYA--LHEKKVNTVHQHPLSEFCFATASLDRTVCLWDSRQLKKAT---------PLLTMPHSRSVNCAYFSPNGHHLVTVGQDNYNHVY-DTRDASHHSTQDVKPTLRISHNNQTGRWLTKLHAAWDPKRPDHYVIGCMEQ-PRRVQIFHA------TRKSPIQELTSEWFASVHSINVFHPMRDWIAGGNSSGRL 529
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: A0A7M7N7U2_STRPU (WD repeat-containing protein 76 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N7U2_STRPU)

HSP 1 Score: 186 bits (473), Expect = 4.480e-48
Identity = 116/316 (36.71%), Postives = 167/316 (52.85%), Query Frame = 1 
Query: 1015 RLEMWVCGTWTQGGGVYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEMDDVIIT----YSHLLGEERLLLLSDGDGGITAVDLRTNQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQL-GAGTGENHIGGMLPIAEMPHFRSVNSAHFSP-SGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRVHVFM 1944
            ++ +W   +     GV+ F PH   V  L F P D +KL S SYDG+VR  D  K  F++    VY  +E D+VI T    +    G   L+  +D  G +  VD R+ +    V+    H +   TV  HP   H FVTAS DRT  LWD R + G GT +       PIAEMPHF+SV+SA FSP +G  + T   DDK+ ++ + E A   + + V       HNN TGRWLT F+A+W P+ E  + +GSM + P  + ++S       ++   V     + + S+ S+  FHP R+++ G NSSG++HV M
Sbjct:  235 KIGLWDVNSTEGDDGVFLFAPHTRPVNCLRFSPSDPNKLFSVSYDGTVRCGDFAKAVFDE----VYVADE-DEVIWTNFFDFMSADGSSLLVTQNDRTGNVVVVDTRSRKGGENVYN--VHSRNAKTVSVHPTMPHYFVTASTDRTAALWDIRSMKGKGTNK-------PIAEMPHFKSVSSAFFSPITGSKILTTSLDDKISIF-ETESAKEGKVTGVKRTLWQSHNNWTGRWLTVFRAAWHPRREDAYVVGSMCQ-PRRIEVFS-------SKGKLVHQFFDEYLASVCSINEFHPTRDLLVGGNSSGKLHVIM 527
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: UPI001BB2AA18 (WD repeat-containing protein 76-like n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2AA18)

HSP 1 Score: 187 bits (475), Expect = 1.050e-47
Identity = 117/313 (37.38%), Postives = 164/313 (52.40%), Query Frame = 1 
Query: 1015 RLEMWVCGTWTQGGGVYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEMDDVIITYSHLLGEERLLLLS-DGDGGITAVDLRT-NQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSP-SGEWLATVGQDDKLRLYRDVEKAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRVHVFM 1944
            ++ +W   +     GV+ F PH   V  L F P D +KL S SYDG+VR  D     F+Q    VY  ++ + +  +Y   L E  LL+ S D  G +  VD RT N+    V+K  AH +   T+  HP   H FVT S D T +LWD R +         G    IA MPH +SVNSA FSP +G  + T   DDK+ ++ D E A   +   V     + HNN TGRWLT F+A+W P+ E  F +GSM + P  + ++S       ++   V     D + S+ S+  FHP R+++AG NSSG++HVFM
Sbjct:  325 KIGLWDVNSSKGDDGVFLFAPHARPVNCLRFAPNDPNKLYSVSYDGTVRCGDFAHALFDQ----VYVADDDEIMWTSYFDFLSETSLLVTSNDRTGNVAVVDTRTSNKSGETVYK--AHPRYIKTLSVHPTMPHYFVTCSNDCTAQLWDIRSM------KESGSNKSIAVMPHSKSVNSAFFSPINGSRILTTSHDDKISIF-DTESAKTGQLKGVQRTLWMSHNNYTGRWLTVFRAAWHPRREDAFVVGSMSQ-PRRIEVFS-------SKGKPVHFFYDDHLASVCSINAFHPTRDLLAGGNSSGKLHVFM 616
[Close]
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Match: W7TFK6_9STRA (Wd repeat-containing protein 76 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFK6_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.600e-47
Identity = 110/310 (35.48%), Postives = 168/310 (54.19%), Query Frame = 1 
Query: 1036 GTWTQGGG--VYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDVEKGAFEQARRRVYANEEM--DDVIITYSHLLGEERLLLLSDGDGGITAVDLRTNQQARRVWKR-QAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGAGTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVEKA---AASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGPHGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSSGRVHVF 1941
            G W   G   V++F+PH+  V  + + P D  KL+S+S+DG+VR +D+ K AF+     + A +++  D      S +      L L+  +G    +DLR+ + +   W   +AH KK N++ AHP   HVF+++S DR V LWD R+               +  + H  S+N+A FSP+G +L    QD KL L+ D   A   AAS     +  + + HNN TGRWL+KF  +WDPK    F +GS+++ P  + ++S  SG +      +A    + M S+QS+  FHP RN++ G NSSGRVH+F
Sbjct:  311 GVWQVEGDKEVFKFRPHISKVASMQYHPADPSKLISSSHDGTVRCLDLAKEAFDL----LVATDDIFQDSGFTCASQVSHSPENLYLAGYEGSTGLLDLRSRKLS---WVHGEAHAKKVNSIEAHPTREHVFISSSTDRVVTLWDDRK-----------PKKEVWSIAHTNSINNASFSPTGAYLLITCQDHKLYLHADPVAAPFTAASPPDLSTAQYRIKHNNNTGRWLSKFWPTWDPKHPDAFVVGSLEQ-PRRIEVFSASSGFQ------IASVRSEWMNSVQSINQFHPSRNILVGANSSGRVHLF 595
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig933.17110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF6_ECTSI1.710e-7870.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRF7_ECTSI2.420e-6157.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3W540_GLOUD6.740e-5741.50Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XZ84_9STRA1.060e-4942.09Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A836C879_9STRA1.130e-4950.29Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A2D4C066_PYTIN1.510e-4939.86Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1CSD2_PYTOL9.110e-4939.52Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7M7N7U2_STRPU4.480e-4836.71WD repeat-containing protein 76 n=1 Tax=Strongyloc... [more]
UPI001BB2AA181.050e-4737.38WD repeat-containing protein 76-like n=2 Tax=Lytec... [more]
W7TFK6_9STRA1.600e-4735.48Wd repeat-containing protein 76 n=2 Tax=Monodopsid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig933contigH-paniculata_contig933:8888..19837 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.4
Seed ortholog evalue3.5e-65
Seed eggNOG ortholog2880.D7FRF6
KEGG rclassRC00508
KEGG koko:K08678
KEGG ReactionR01384
KEGG Pathwayko00520,ko01100,map00520,map01100
KEGG ModuleM00361
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0008150,GO:0031974,GO:0031981,GO:0034399,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051726,GO:0065007,GO:0070013,GO:0080134,GO:0080135,GO:0097159,GO:1901363,GO:1901976,GO:2000001,GO:2001020
EggNOG free text desc.cellular response to DNA damage stimulus
EggNOG OGsKOG4328@1,KOG4328@2759
EC4.1.1.35
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons13
Model size1947
Cds size924
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig933.17110.1prot_H-paniculata_contig933.17110.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig933 8888..13478 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931161.4641614-CDS-H-paniculata_contig933:8887..90551622931161.4641614-CDS-H-paniculata_contig933:8887..9055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 8888..9055 -
1691481618.1484616-CDS-H-paniculata_contig933:8887..90551691481618.1484616-CDS-H-paniculata_contig933:8887..9055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 8888..9055 -
1622931161.477901-CDS-H-paniculata_contig933:10135..102731622931161.477901-CDS-H-paniculata_contig933:10135..10273Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 10136..10273 -
1691481618.1621041-CDS-H-paniculata_contig933:10135..102731691481618.1621041-CDS-H-paniculata_contig933:10135..10273Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 10136..10273 -
1622931161.4902008-CDS-H-paniculata_contig933:10850..110691622931161.4902008-CDS-H-paniculata_contig933:10850..11069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 10851..11069 -
1691481618.175871-CDS-H-paniculata_contig933:10850..110691691481618.175871-CDS-H-paniculata_contig933:10850..11069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 10851..11069 -
1622931161.5070255-CDS-H-paniculata_contig933:11838..119161622931161.5070255-CDS-H-paniculata_contig933:11838..11916Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 11839..11916 -
1691481618.1887486-CDS-H-paniculata_contig933:11838..119161691481618.1887486-CDS-H-paniculata_contig933:11838..11916Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 11839..11916 -
1622931161.5229723-CDS-H-paniculata_contig933:12821..129591622931161.5229723-CDS-H-paniculata_contig933:12821..12959Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 12822..12959 -
1691481618.20174-CDS-H-paniculata_contig933:12821..129591691481618.20174-CDS-H-paniculata_contig933:12821..12959Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 12822..12959 -
1622931161.538386-CDS-H-paniculata_contig933:13295..134781622931161.538386-CDS-H-paniculata_contig933:13295..13478Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 13296..13478 -
1691481618.2150936-CDS-H-paniculata_contig933:13295..134781691481618.2150936-CDS-H-paniculata_contig933:13295..13478Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig933 13296..13478 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931161.5541625-UTR-H-paniculata_contig933:13478..134851622931161.5541625-UTR-H-paniculata_contig933:13478..13485Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 13479..13485 -
1691481618.2243848-UTR-H-paniculata_contig933:13478..134851691481618.2243848-UTR-H-paniculata_contig933:13478..13485Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 13479..13485 -
1622931161.576467-UTR-H-paniculata_contig933:14410..145101622931161.576467-UTR-H-paniculata_contig933:14410..14510Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 14411..14510 -
1691481618.2327993-UTR-H-paniculata_contig933:14410..145101691481618.2327993-UTR-H-paniculata_contig933:14410..14510Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 14411..14510 -
1622931161.6048977-UTR-H-paniculata_contig933:15710..158111622931161.6048977-UTR-H-paniculata_contig933:15710..15811Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 15711..15811 -
1691481618.2422478-UTR-H-paniculata_contig933:15710..158111691481618.2422478-UTR-H-paniculata_contig933:15710..15811Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 15711..15811 -
1622931161.6263492-UTR-H-paniculata_contig933:16130..163471622931161.6263492-UTR-H-paniculata_contig933:16130..16347Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 16131..16347 -
1691481618.251901-UTR-H-paniculata_contig933:16130..163471691481618.251901-UTR-H-paniculata_contig933:16130..16347Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 16131..16347 -
1622931161.6440368-UTR-H-paniculata_contig933:17346..174831622931161.6440368-UTR-H-paniculata_contig933:17346..17483Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 17347..17483 -
1691481618.2675362-UTR-H-paniculata_contig933:17346..174831691481618.2675362-UTR-H-paniculata_contig933:17346..17483Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 17347..17483 -
1622931161.6622107-UTR-H-paniculata_contig933:18226..183841622931161.6622107-UTR-H-paniculata_contig933:18226..18384Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 18227..18384 -
1691481618.2764447-UTR-H-paniculata_contig933:18226..183841691481618.2764447-UTR-H-paniculata_contig933:18226..18384Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 18227..18384 -
1622931161.6772974-UTR-H-paniculata_contig933:18962..191261622931161.6772974-UTR-H-paniculata_contig933:18962..19126Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 18963..19126 -
1691481618.2848322-UTR-H-paniculata_contig933:18962..191261691481618.2848322-UTR-H-paniculata_contig933:18962..19126Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 18963..19126 -
1622931161.697832-UTR-H-paniculata_contig933:19698..198371622931161.697832-UTR-H-paniculata_contig933:19698..19837Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 19699..19837 -
1691481618.2936058-UTR-H-paniculata_contig933:19698..198371691481618.2936058-UTR-H-paniculata_contig933:19698..19837Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig933 19699..19837 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig933.17110.1

>prot_H-paniculata_contig933.17110.1 ID=prot_H-paniculata_contig933.17110.1|Name=mRNA_H-paniculata_contig933.17110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
MWVCGTWTQGGGVYQFKPHVGAVPRLDFDPLDGHKLLSTSYDGSVRRMDV
EKGAFEQARRRVYANEEMDDVIITYSHLLGEERLLLLSDGDGGITAVDLR
TNQQARRVWKRQAHEKKTNTVHAHPMNRHVFVTASLDRTVKLWDARQLGA
GTGENHIGGMLPIAEMPHFRSVNSAHFSPSGEWLATVGQDDKLRLYRDVE
KAAASEQSSVSPVHSLPHNNQTGRWLTKFQASWDPKSEALFAIGSMQRGP
HGMHLYSVPSGEKMTRPSAVALTGGDIMTSIQSLAVFHPKRNVIAGVNSS
GRVHVFM*
back to top

mRNA from alignment at H-paniculata_contig933:8888..19837-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig933.17110.1 ID=mRNA_H-paniculata_contig933.17110.1|Name=mRNA_H-paniculata_contig933.17110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10950bp|location=Sequence derived from alignment at H-paniculata_contig933:8888..19837- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCAACTCGACCAGCGACTCCTTTGTCGCCCATCCTGAACGACCCGTCGG
TTGTACTTGGCACCATCTAGAGATCGTGTGCTACCGCTACTTCTCGGATC
TCTTCTACCGTAGGTGGATCGGGTGCGAGTGTCATTAACGTAAGCACACA
GCCATACCTACTGTATCACTTACAGCAGTCACTCCAGTCCAGTCAGTACA
GTACCCTGCAGTACAGTTGAGAGCCTCTGGGCGCTACAACAGTCGACGTG
TCTGAGGGTAGATCCGGTATAGACTCGCCAACACCAATAGGGTAGCAAGT
AAGATGTGAAGTCGGGCCTTTAGAAAGACCCATCTCATCTGATTATTGCA
AGTATTATTTTGGCTTCGAGCTAACAGTCTCAGGTGTCGATAGCCTTGGA
AAGCTCAACGGAAGTACCGGCGAAACTGACTGTTTTACTAACCGTCTGCA
CCGCTTGATCCTGGACAAGTCCCAGTCGTCATTCTTTCGCGTTTCCCTAG
AGCCCATAAAAATGCTGCTCCCTTTCGCCTGTAGCTCTTGGCTGTCAGTT
CATATTTCAGTACGGCTTATTACAGTGAACACAGAGGGAATGTGATGGTC
AACACTCGCTGTGGACTATTTGAACATTTGAACATTTGAAACATTCCTAC
ATATTTTTCCAATTCATTGCACCACATGATTCAAATTTGCTTGCCTTCGC
CCTCGTTTCAGCGCCGGAGACAGTACACTACAGTTGAGTTGACACCACTC
CTCCGCACAGCAAGCATTAGACGCTATGAGAAGGTCGTCTGCGAGGCTGG
CAGCATCAGCGGATCCCGCAACAAATGTCGAGGTGCCTGTGCCCAGCAAA
AGACCGAGGCGTTCTTCATCGGGAGGTGTGACAACGAAACAATATATCAA
GTGCTTCACCTCGGGAGTACAGCAACGGAGGGCTTTTCACGTGATCGAAA
AAATATGGCAGGACCGACTGCGAAGCGGTTTTACCAATGCAAAATCTGAC
AGAAATCTACCGCGAACCGGTTCCGTTTCTGGTCACGTGTAAAAGTTATG
TGTAACACGGCTCATATGAAAAGCCCTTGGGAAACAAGCCACACACCGTG
GGTGATGGATTCAATCATGTTCATGATTGACCGGCCGAACAGCAAACAAT
CATTTGAACGTGCAATTCTGCATGAGGCGGGAATTATCTGTTCGGCATTT
TTAATTGTTTTATTTTGAACGTTTAGGCGGAGCGGTACGTTCACCAAGAT
ACTGTACTTCATTCGCAGTACATACTCATGCATACGCGCACGCGCAATGG
TTTCGCTTCCTCTGTGGTCTATGCCCCGTCTACACGGAGAACTCCACGTC
TCATGTCTCATGTGTTGATGGAATTTAACATTAGCGGCCTTCGATGTTGT
GACATATCACAAACTCCGAGTTCCATTGGTTTTACTGTCATGCGATCTGG
AAGGCCGCAAGACGGCGGGGGAAGGATGGAAGAACGATGAACCTAGCGCG
ACGGCTGAGAAGCTTGCCGAGTCATCCAAGGAAGAAGCTCATGGAGTAGC
TCCCACAGGGCCCTCAGCCTACGAGCTAGAGCGATTGGAGAAGATCAGAC
GCAACGCGGAGGTGACCATGACAGGTTGTATTGTCTGTCTTGCGTTGGTT
AAGGCACCATGCCGGGCGACGTCTGAAAGACAACTAGGAGAAACGAGAGA
GACCCTGACGTCGGCATCAAAAATTCCTTCGCTCAAGAAATGACCACAGA
AGTGTTCGATCTGCGTTTCCCAGTCTCATGAGCGTTCTTGGGGGGCTGGG
GGAATACGTTCAGCAAGTGGTTTTCCCTCAATTACGCCCATTCAGCTAGT
GTGTTCGTGTTTTGTCACCACACCCATCTTTCTGAGCACGTACTAGTATC
CTTTGGTGTGCTCTATAGTCTTCACCACTTTTGAGTACAATACATGGGAA
ACATTTTTTTCCCGGGGGGGGGGCACGTTACGAAATTATTTAACACGGAT
ACCTAGTTCCTTCTTCGCAAATCATGTCATGTCTCATATTGCTGAACGTA
ATACACGGCGTGTCTAGCTGACGTTTTGGTGTTTCGTAGCTGTCAAGCGA
TCGGTTTCAAGGTCCGCGCAGCATGCTCATCCCGCATTTCACGTGCGTCG
GCTAGGTTGACTTATCACAACCCCCAAGCGGGTGGGGAATGGTGGGCCTG
ATGGGATACGAAAGGTTGGAGTTGGACTGGGCAGTTTCAGCTGGTGACAA
CAAGGTTTTCGTTCCGTTTGATCCTATCAGGTGACTCTTAGCGCGCTCAG
CACGGAAAGCTTGAACGACCTTCTTGTTTGCTTTGCCTGAAACAAATGTA
TCAGGTTATGGCTTCGCTAGGCTTGGGAACAGGGAAGGGGGGAATGCGGA
CTACCGTCGATAGCGATGCCGCGAAGCGAGCCAAGGCTCGCGGCCTCAAA
GCCACTTCGAGGAAGCCGCCACAGAAACGCGAGAGAACCAGGTATACATG
GGAATTGGTCTGGTTGGACTGTTTTTAACATCTGTCTGCAAAGCGGTTGT
TGACGCCGGAGCGATGGGACCAAGGGTGTCTTCCTGGAGAGGGTCTCTGA
GAAGTCTGAATAACGGCGGAGTTGCAACTATTCCACGTTTCGAGGGCTAC
TGCTGGCTACGCCACAGCTAAATTACGCCGCAAAAAGAAAGATGAATTAC
GTCGAGTTGTTCGAACAAGCGACTGAATCATTACTAGAACCAAGAGTACT
TCGCCACGATTACCTCCGGTCGGTACGCCGTAATAATACAGTGTCGTTAC
AGGTAACCAGGCTGAAGCATACGCTGCTCAGAGAATATCACTTGAATGCA
GTATCCAAAATAGTGATCCGAAAAGCCCCGTCACCATGACTATTGGTGAG
TTGGCCAGCGCCTTGCCCCCCACGTGGGCGGGACGTACGTAAGAATGCTA
GCCGAAGGCATCAACATTTTCTTCGTTTTACGCCGCCTCGCCCCAACCTG
CTCCTTTCTGTTTTGATGGGATTATATTCAGGTTGTTTTATAAAAGGCTA
ATAATGCGGTATGTATACCCGCTACAGAGCTTGTATTGGCGAAAAAAGTG
AAAGTTTATGTGGCAGAGGGCTTCTAGCGAGCATTCATATTCTGAAGACG
CAAATATTGGCGAACCTCACCCCCCCCCCGTCTCTGAGGCTCAAACGTGT
TCGAAGGCCTACTTACGTTTCGGTATTGGGAACTGCTTGGCCCCTCGAAT
AACTTTAAAAATTTCACGATAACTGAAAGCCTTTATTTATCAAGAGCGAA
AACAAACATTGTCTACTAAACATGGCGGAAGTAAATATATATATATATAT
ATATTTGACTGTCGTTACGGCAATATTCAAATTTAAGGGATACAAACTCC
TCTACTCCTTATATACCTGGCACAAGTTGTTTACCTCCCTTACCTACCCC
ACCAATGGACCTGCCGGTTGACCGCATTCCACACGGGCAGGGAATCCAGT
CGACTGAGGGGCTTTTCGCCGGAAGGACTGCCCATGGCAGACCCTGAAGC
TGCGTTTACCAAAAGCAAGAAGAGGACCTTCAGCCACACGACGGAAGCGT
TGGTGGAACCGCCGTTGGCGTATCATTCGTCGCGAATCTCCGGAGATGTG
TCAATGGAATCCTCGAATTCCTCAGCCGATGGAACTCTCCAGCTGAGACA
GGCGGGTGTTTACTGCTGTTTCTCCACCCAACCTCTCGTTTGTGTAATGT
CGCGACACCTAGCTGTGCCCCGAATACCTTGTAGCAGTAGGCATGGTATT
CTAAGACATTATTCCATGATGGTGGACGAACAAAAGCATGGGAATACCTG
TACAATACGGTGTGTGTAGCCATGACACCAACCCGTGAGACAATTTTTGT
CTTCAAGGTAGAGTAATATCGTGTCAAAGTCAACTAGTTCTTGCCATACA
TATCGAGCTAGTGTGTTTGCTTCAATTCACTTCTTCCTGTTGTTTGTTTC
GTGGGTATTGCTGGTGGAACGCGCAGATGTTGGGCGGATTGGTCGGGCGT
TACGGAGTGGATGATGACGATACTGACTACGAGCTAGCCAAGCCTGACGA
GGCGCTCACCAGGTACGGTACTGTACAGTACAGTACGTCACCGTCGTGCC
GGGGAGCGCCTGCCTTGATCGGGGTCAGCAGAATATGAGTTAATTATGGT
GGCGTTCAACCGATGTCAAATATGGAGATTACTGTGCAAGGAATTTATCA
GCAACTTGAACAGACAGCCCGTGGCTGGCTGCTTGTCGATGGATAATTGA
CCACCATGTCCGTCTCCTGAAGAAATGACATATCAAGAGAGGGCTGAAGG
AAAGCTGGGAGTGCGTTGTTTTTTTGCTCCTTGGCTGACGATAGAAAGCG
TGTTTTCGGCATAGTACAGGCGAGCGATATCTACAAAGGGAAAGAGCGAA
TGGCCTACAGTATTACGCCTTGGATACGTGCTGGAAACCTGCTGGAAACA
TGGTGTACAATGACTGTGTAGTCTGCGATCGACCTGCTCTGCACACAACC
GATTATGCTTATTTTTCCATCACATCAACCCGAGTGCTCAGACCCGCGAT
TAGAAGATGGAACATTCGCAGAAAAATTTCCTCTATTCTGCAAGCCTTCA
TGAATACACATGAACCCCTGTAAAAGTTTGATGTATGAAAGCATTGTGGA
AACCAAAGGCATCATTTGAAAGCACGCAAGCTCTGGTTGCACACGTATAT
CTTCAGTTAGTATTTCCGATACGATCGTGTTGAGAAGAGGCCCGCTTCAG
CTGCGTTTTCTATCCGTGTATATCAGCTATAGTGAAAAATAGCAAAAAGC
GACAAAAACAAGTCGAATGGGGATCATTACACGTCGGCAATGATGTCAAA
TGAGAACCCCGATGAGGAACAAGAACCTCTTTTGCTGCGCACGGGAAATT
CAAGCTGAGCGCGTGTGCTCTTTCGTGCGATGTGTTTACTTTCTGAAATG
CCTTTTCGTATCAAAATTGATCTTTTTTTACGTACAATCACCGACAGGTG
TGAGACTCGGCAAATATTCAGGGCAGTGTAGCGAGTATCCGTTTATTAAA
GCAATATATTTTCTTATCGTCCGACTTTTCCATGTCCTCTTTTCACGCCA
TCTCAAGGTAATACCAAAATTTGTAACCCATACATCGCGTAGGAGATGAA
TAACGCAGGTCGCACTTGGTAGACAAAACCCTTACTCAAAGGGCGCTTGA
CGGCCTGCCATTGTTATGCTTGTCGTTTTCGCTTGTGCTCATCCCTTGTT
TGATTGGCGAAGGTTACGCGGTCTGAGTGTAGCGGAAGCCGGTGTGTGTA
AGGTGGTGACTGAGAGGGCGTACAGTATCTCGTGGCACCCGAGCAGCGCC
AAGCTTCTGGTGGCCGTTGGTGACAAGGTTTGTTCTTGACTGACTGATAT
CTGCCATCGCCGTGCACGCGAACCTTCGTATTTCGACTCTTATGTATAAC
TCTACGCAATCGCTCAAACGAAGGCACTTCGTTAAGTCTGTTTCAGAGAA
AAATCACGATTACGCTGCCGCCGTTTTGACGTGCGTGAATCAAGATGCGA
TTACAGTCGTGAATAGACGTAAGCTGTTCACAACGAAAATGGGGGGTCGG
TTAATTTCGGAGTTGAGTCATGGGGACCCCCCTCCTTCACTTGAAATCCC
CTTCCCGGAAGACCTCTCTGACAATAACAAAGCTCCGCCCTCTCGAGGAC
GTTTGGTCAATGGTGAAAACAAGTGCGGGATGCAAAACGTGAATACGCCC
TCCTTATTGGTCATGATTTAATTTTGCTGACTATTCTATACATTTGCACA
TTGAAGTCAAGTGCATAACTTTAACTTGGATTAAATGGAGTTATGAAATG
AGGTCTCCGTCCCTCCCCCGTATCCTACCGTCATCCAGCTAACAAGCCTG
TCCTGTTTTTCTGTTCCGAAAAAATGTCGCCCTCGAAGGTTTAGCCTCTT
TGAGCCCGACTGACCAATTTTCGCGTCATGTCTTCCAGTGACATACCCTC
TTTATACATGGATCTACGCAATGTATTACTTCTGCAGTAAATAGCCCAAA
TGCATCATGCCCACACCTCTAGGAGTAGACCGAGACGTACGTAAAGGCGT
GGACCGCGCCTCTTTTGCTGTCATCATTAGCTTATTTGAATATCTGCCTA
TCCTCCTGCCTTGCGTGCGTGATTCTTGATTTTTCCTCGAATCTCAAAAT
GCCGCCCATCCTTCCAAATTTGAGTGTCTTTGGATCTGTTTGCTGTGTAC
CTCTGTGGCTCATGTGCGCGTTCGCCGTTGTGCCATACGGGTTATTTCAC
AGATTGGAAATGTGGGTATGTGGGACATGGACGCAGGGGGGGGGGGTGTA
CCAGTTCAAGCCTCATGTAGGTGCCGTGCCCCGCCTGGACTTTGATCCGC
TAGATGGGCACAAGCTACTGTCCACTTCTTACGACGGGAGCGTGCGGAGA
ATGGACGTTGAGAAAGGCGCTTTCGAACAGGCAAGGAGGAGGGTTTGTTA
TACCCGAAGTGTTATTTATTGTTGTTTAACTGCTCGCGGTCTAAGGGTTC
ATTTTGCTTCAAAGCGATGATTTTTTTCTGCAATTTTTCAACCATTATAT
ATATTCATGGTATGTTGCAGGGATTTGTTTACGTGTTGTTTTGTGTGAAA
ACAAGAGAATGCTTGGAAGTATGTGAGATTTCAAGTTGTTCTGAGTATTG
TCATTCTCGTTTTCACCATCAATTACCAAAAACAAAAGTAGCTGTGGATG
CCTTGACCTTTTGTGTTTCATACTGTATACTTGTCGTGCGTCTACTCTGA
CGCCGATCTGTTTGAATGTTGAGTGCAGGTTTACGCTAACGAGGAGATGG
ATGACGTAATCATCACGTATAGCCACCTGTTGGGAGAGGAGCGGTTGCTG
CTGCTGAGCGATGGCGATGGTGGCATCACTGCGGTCGATTTGCGCACCAA
TCAGCAGGCAAGGCGTGTTACTCCTCGGATAAATGTTGTCGAGAGGTAGA
AAGAACTACATCACCGGAAAAATGATGAATAGTCTGACTCGACGAATTCA
CCCGCGAAGGAGGCTATTCGCTGCAACTATGTGTTGCAACCCTTCGAGTC
CTGGGGGCCTTTATTGCAGAAATCTCTCGGTCCCCTGTCGCAATAGGAGG
AGGTACCGATTCGACACGGGCACGATTGCTTCGACCGGGGTTGGATCAGA
CCCGTCTGTCCAAAACATGGGAAATAGTATATGACAAATTGCGACCCTTG
GAACGGAAGGGGTATCCACTCTGCTTTCTCATGTGACGTATATCGAAGGG
GAACGTTCGCGCTGTGTGTGCTTCAAAGGTAACAGCGGTTAACGAGCTGT
TGCCAACGACCAATTTGCGTTAACGACCACTAACACAAGGTCAATTCATC
GACATGGAGAGTGAACAAAATGTGGTATACGAGGGGAAAAAATACAAAAG
TACACAAGGCCGGCAAACTGTGAATAGGAAAAGGTGATCCCCACCTTCGG
TACATTGGGTAGAATACATCTGGCATTTTCTGGACATATTCAGGTACAGG
ATATCTCTCGTGCATCATACGCAACCTCGAAGCGCTACTGCGCAACACTC
GATTGTTTTTTCTGTTTTTTTTTCATGAACGTCAATAGGGATTCACTAAA
TGGTGTTTCATGTACAAACAGCGCAATTCGGGTGGTTCAAATCTCAATAC
AAATCCTGCGAAAATATCACTGCGCACTCTACCCTAATGTGTCCAAAAAA
AACAGAAGGTACAACTTTTGGAGTTCATCACCCTCAGTAAAAAGAAAAGG
TAAAAGAAATACGAATCTCTTACCTTTCTATGATTGTTTGATTGTTTTGA
GTCATGACCGTGCTGTGGCAGGTGTGGAAGCGACAAGCGCACGAGAAGAA
GACCAACACGGTACATGCACATCCCATGAACCGACACGTTTTTGTTACGG
TGAGGGTCAAGAACATCTTCCTCAACTGTACCGTAGCGTGAATTAGTACT
CTTTTGGGCACAGGTCTTTATCCACAAGAACTAGTTGGCCACGCTTATTC
TTGCCTCGCGCATAGTATGGTTGTTGTTTAGTCGCATTTACCTTCAACGA
AGAATCGATCAACTACTCTCATCGACTAGTAATAGCTACTCGACGTCTGC
GTTCGTGCGGCACACACGAGACCCAAAACTCTTCAATAATACGGTTAGGG
AAAATTGCCCCGGAACTTATGCCGCAGTCACAAGCTCACCACCACCACCA
TTGCCACCACTACCATCACCTACATTGCCACCACAACACACCTGAACTCT
CTGGTACGTTGCCGCACATTGTCAACTTCTTCCAAGTAATTTGAGGTCAC
CAGCATGTCGTCAACGTCGCCTGTTACCGTGTACAAGATCTACATATCAT
TTAGGCTGTCAGCGCATCGTCAAACTCAGTCGTGACCTTGTATTTCAATC
GCATAACAGTGTGCAACCTTGGGGTGAAAAGTTGCCAGCGTCTTTTCAAC
CTAGATTACTTGATGACATTGTGCAGAGCAACGATCGACGTTGACAAGGT
ACTTGAAGCCTAAGTATTTGTAGGAGGTTGAGATATATGCGCGACGTATT
CTCGGGTCCACGTGTGTACTACCGATACACCACCGCCGCCAGTAGGATAG
CGTCTCTGGAACCAAAAAACTTAGTTTGTTTGCCGTTACCTCCTCCTGTG
CTACTACTACGTTATCAGGCCTCCCTCGATCGAACCGTGAAGCTATGGGA
TGCGCGCCAATTAGGTGCTGGCACAGGTGAAAACCACATCGGGGGGATGT
TGCCTATTGCAGAGATGCCCCACTTCAGGAGCGTCAACAGCGCCCACTTC
AGTCCGAGTGGAGAATGGCTTGCTACTGTGGGTCAAGACGACAAGCTCAG
GCTCTACAGGGATGTCGAAAAAGCGGCCGCAAGTGAGGTAATACATATGC
AAGGTTTCCATGCTGTTGTTTGTGCGCTAAATGGCGACGCGTCCTCGTGT
GATACGTTAGTGAGATGCAGTCCTCAACACCAATGCATTGCCGTAGATCG
ACTTCTGTTCGTGTATGAAGAAGCCGGCCTTGCGCTTGACCTCGCCGGCA
GTTCGAGATATTGGTGCTATCGCTTTCCGTGCTGCCGTCCCTATTGTACA
CAAATTGAGAGAAATGCAATCGCTCGGTTTAGCGTTGAGGAAAACACATA
ATGTATAAGAGCAGCCGAGCAGCCTACGGTCCTATTGTAGCGGAGCTCTA
TCTGATCAAGGCTGACTGCTCCTTGTCTTACGTTTGACAACGCAGTATTT
GAACCGCTTGCCGTTTTTGTTTAGATATGTGGCAACATTGAGTGATCTTC
TGTCCTGTCGCAGCTGCGTCGGCGAACGCTCTTCCGTGGCTGTACTAATG
ACGTAACGCTATAAAATATGCAAGTATGCTCTGACCTTCTGCCATAACTC
TAAATCGCCGTGGAGCTACCATGTCACACCACGCTGTAACGCCGTAATTT
CGTGAATTTGGCAGCAGTCTTCAGTATCGCCGGTCCACAGTTTGCCACAT
AACAACCAGACTGGTCGGTGGCTCACCAAGTTCCAGGCTTCATGGGATCC
AAAATCTGAAGCTCTGTTCGCCATCGGCAGCATGCAGCGGGGACCACATG
GGGTAAGTGGGCACTGCTAGTGCCTCTATTTGCGTTCAGCGAGTAGTCAT
AAAGCTCACTTTGGATTAAGCAAAATGGCCCAGAACGAACTCATGCTTTG
GATAAGGGGCTTTGGTTGGTTGAGATCTCATATTGACCGTTCATTCTATT
CGGCTTGTCTTGGAGTTAGATCCGGACACCGTAACCTTGCGACTCAGAAG
TTCAAAGGCAGTAGATAAATTGCGCTTTGGGTATGTTGGAACCGTGTAAT
TACTTGGGTGTTCAGTCAATACTCGAGTTTGCTCACTCTTGGGAGAGATA
TCGCCACGTTGAGCAAAGATCCAAACCCCCCGAAGCGCTAAGTTGCTGAT
TCAGAAGATTGAGATGCGAAGTACCCGCTTTTTTGCGTGGCATACCCACT
TTTCGTACCGTCGAATATTTCGCGGTTGCTATAAAGAAGTTCAATCGCTG
CGCAATGGAGCCTTGTACGTACTAGCCGTTTGTCTGCCTCTTCGATAACG
AAAGTACCTGGACCCAGAGACACTTCTCCGGAAAAATGGGCTAGAGCTCA
GGCGTTTGACTCAGATCTTTACTCAAAAGGAACGGAAGATGATGTGGTTG
CTGATACAGCCCGTGTGAAAAGTAACGACTGTATGACATGAGTGAACTAC
GATCCAGTTGTCTGGACCACGGCAGCTGTGTAAAGGTTCAACACCCTACA
CGACACTAATACCCGGAAACGAACCATTTACACCGTAAACTCATACGTTG
AAACGACAATAGTTGTGAATGTGTTCCGACTTGGCAAGCTGGCAACAGAT
TCAAACTTGAACACGCCCGATCCAAAGCAAACTCCAAAATTCGCCACCGT
GAATTTTCTGTCAATTGTCGCAGTTAGGATATGATTCGCACCCTGCCATT
TATTTTGGATAATGTGGGAGACTGCGCCGTCTCGAAATCAGTGTCGTCGT
TTTGAGTTTAAGTGCAATTTGTCCACCCTAATTTTGCCAACATCCTTCCA
TTTTGTCCTCTATGACACAACGTTCGCACTCCATGGTATCTAACCCTCTT
CCTTTCCGCACCTGTCCGTTTGACGTATGCAGATGCATTTGTACTCTGTA
CCGTCTGGGGAAAAGATGACGAGACCTTCCGCAGTGGCACTTACCGGGGG
TGACATCATGACATCTATCCAGAGTCTTGCAGTTTTCCACCCAAAGAGGA
ATGTCATTGCCGGGGTCAATTCCAGCGGACGCGTTCACGTCTTCATGTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig933:8888..19837-

>mRNA_H-paniculata_contig933.17110.1 ID=mRNA_H-paniculata_contig933.17110.1|Name=mRNA_H-paniculata_contig933.17110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at H-paniculata_contig933:8888..19837- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGGGTATGTGGGACATGGACGCAGGGGGGGGGGGTGTACCAGTTCAA
GCCTCATGTAGGTGCCGTGCCCCGCCTGGACTTTGATCCGCTAGATGGGC
ACAAGCTACTGTCCACTTCTTACGACGGGAGCGTGCGGAGAATGGACGTT
GAGAAAGGCGCTTTCGAACAGGCAAGGAGGAGGATGTGGGTATGTGGGAC
ATGGACGCAGGGGGGGGGGGTGTACCAGTTCAAGCCTCATGTAGGTGCCG
TGCCCCGCCTGGACTTTGATCCGCTAGATGGGCACAAGCTACTGTCCACT
TCTTACGACGGGAGCGTGCGGAGAATGGACGTTGAGAAAGGCGCTTTCGA
ACAGGCAAGGAGGAGGGTTTACGCTAACGAGGAGATGGATGACGTAATCA
TCACGTATAGCCACCTGTTGGGAGAGGAGCGGTTGCTGCTGCTGAGCGAT
GGCGATGGTGGCATCACTGCGGTCGATTTGCGCACCAATCAGCAGGCAAG
GCGTGTTTACGCTAACGAGGAGATGGATGACGTAATCATCACGTATAGCC
ACCTGTTGGGAGAGGAGCGGTTGCTGCTGCTGAGCGATGGCGATGGTGGC
ATCACTGCGGTCGATTTGCGCACCAATCAGCAGGCAAGGCGTGTGTGGAA
GCGACAAGCGCACGAGAAGAAGACCAACACGGTACATGCACATCCCATGA
ACCGACACGTTTTTGTTACGGTGTGGAAGCGACAAGCGCACGAGAAGAAG
ACCAACACGGTACATGCACATCCCATGAACCGACACGTTTTTGTTACGGC
CTCCCTCGATCGAACCGTGAAGCTATGGGATGCGCGCCAATTAGGTGCTG
GCACAGGTGAAAACCACATCGGGGGGATGTTGCCTATTGCAGAGATGCCC
CACTTCAGGAGCGTCAACAGCGCCCACTTCAGTCCGAGTGGAGAATGGCT
TGCTACTGTGGGTCAAGACGACAAGCTCAGGCTCTACAGGGATGTCGAAA
AAGCGGCCGCAAGTGAGGCCTCCCTCGATCGAACCGTGAAGCTATGGGAT
GCGCGCCAATTAGGTGCTGGCACAGGTGAAAACCACATCGGGGGGATGTT
GCCTATTGCAGAGATGCCCCACTTCAGGAGCGTCAACAGCGCCCACTTCA
GTCCGAGTGGAGAATGGCTTGCTACTGTGGGTCAAGACGACAAGCTCAGG
CTCTACAGGGATGTCGAAAAAGCGGCCGCAAGTGAGCAGTCTTCAGTATC
GCCGGTCCACAGTTTGCCACATAACAACCAGACTGGTCGGTGGCTCACCA
AGTTCCAGGCTTCATGGGATCCAAAATCTGAAGCTCTGTTCGCCATCGGC
AGCATGCAGCGGGGACCACATGGGCAGTCTTCAGTATCGCCGGTCCACAG
TTTGCCACATAACAACCAGACTGGTCGGTGGCTCACCAAGTTCCAGGCTT
CATGGGATCCAAAATCTGAAGCTCTGTTCGCCATCGGCAGCATGCAGCGG
GGACCACATGGGATGCATTTGTACTCTGTACCGTCTGGGGAAAAGATGAC
GAGACCTTCCGCAGTGGCACTTACCGGGGGTGACATCATGACATCTATCC
AGAGTCTTGCAGTTTTCCACCCAAAGAGGAATGTCATTGCCGGGGTCAAT
TCCAGCGGACGCGTTCACGTCTTCATGTGAATGCATTTGTACTCTGTACC
GTCTGGGGAAAAGATGACGAGACCTTCCGCAGTGGCACTTACCGGGGGTG
ACATCATGACATCTATCCAGAGTCTTGCAGTTTTCCACCCAAAGAGGAAT
GTCATTGCCGGGGTCAATTCCAGCGGACGCGTTCACGTCTTCATGTGA
back to top