mRNA_H-paniculata_contig9323.17107.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A6H5K8J3_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J3_9PHAE) HSP 1 Score: 523 bits (1347), Expect = 2.920e-170 Identity = 334/729 (45.82%), Postives = 404/729 (55.42%), Query Frame = 1 Query: 28 FRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMP----------------AKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQ-------------------------AAHWSVICQAMEGHVRHSLASGWSLPKLKSPADPDMSMQVKDMVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPSSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR---------------------------------------------------------------------SDSDHPKWTYTLEDGKCTNSLALQTARRYNIPGTIIARAEALSVEFDRICRGAAAATAASRWREEGRAAAAPTAEARGEDWWPSDGKGWGDGPGRARKIEDAARVVCSIVGCKEKDMAFVPSGYGTPPALEGRSCLYVLRYAASL-------TPRNEPRNDLQDRLSSSRGVAAAGAXXXXAGGAKSTAAEEALDAERDGGARSRLDDDC---EQAWRGWKEEG----GVWFYVGESDVIRARLAQHRNRWGISSTTVASSLSHG---KLDAIVVAMENKSSARRYETALIRAMKERGFHLISDKDGSRVNPS 1833 FRGSLSLEHEAT+KAY L ASELC AVKEDFPNAAQ DLTFDIHNNAI+LTKLP++ S+++ T+T+ A D + + ++ FLNPHDRNGKL+ KRFTT +V+ ALS YL+A+++T+ V +LQALSD +V +NDLPVIAQ AAHWSVICQAMEGHVR +L+SGWSLP LK +PDMSM+V+++VPYWLPR+EAVPNSFDF GLFLLTAPNMSGKSTLMRAVLACSLL NAGLF P ++AV+PR+D FFLRTASYDIPAEDKSAFALEMDDVR D+D+P+WTYT+EDGKCT+SLALQTA++YNIP +IARA+ALS FD++ RG G + ++DA +VVC + ++D+ V SGYGTPP LEGRSCLYVLRY+A L R SS V A G G A++ + GG + + C E +G +EEG GVWFYVGESD IR RL +H RWG KLDA+VV +EN+S ARR ETALIRAMK+ GFHL+SDKDGSR + S Sbjct: 292 FRGSLSLEHEATKKAYGLLHRTASELCAAVKEDFPNAAQ--------------DLTFDIHNNAIFLTKLPAN----SNNAATRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPDTKREKKQSKFLNPHDRNGKLMPKRFTTERVSTALSGYLTAIEETKAAVLFQLQALSDSIVTNNDLPVIAQGVNAFLSLASVRTLHISPLTAPSRKAAHWSVICQAMEGHVRRALSSGWSLPSLKDVNNPDMSMKVENLVPYWLPRQEAVPNSFDFGGLFLLTAPNMSGKSTLMRAVLACSLLSNAGLFAPCTSAVVPRFDCFFLRTASYDIPAEDKSAFALEMDDVRVMLRDSSGRSLALVDELGKGTDGASLAGAILEEMDRVSITGIFATHLHELFELPLETESLTHKRMGIDWDDADNPRWTYTMEDGKCTDSLALQTAKKYNIPAGVIARAQALSETFDQVRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFKTMKDATQVVCRVADRPDRDLISVESGYGTPPTLEGRSCLYVLRYSALLGSGGGNGASXXXXEGPGVGREPSSEAVVAEGVGGHAHGEARTLS----------GGGETEVGKPCSPNEGTGKGKEEEGEEEAGVWFYVGESDSIRERLKRHAKRWGDGRXXXXXXXXXARAFKLDAVVVPVENRSEARRLETALIRAMKDEGFHLVSDKDGSRTHFS 992
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: D7FNS7_ECTSI (MutS protein homolog 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS7_ECTSI) HSP 1 Score: 378 bits (971), Expect = 3.210e-122 Identity = 215/356 (60.39%), Postives = 250/356 (70.22%), Query Frame = 1 Query: 1 FSLVFFQGNFRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTN-----------IPTASWNEDGKDRMPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPADPDMSMQVKDMVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPSSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR---SDSDHPKWTYTLEDGKCTNSLALQTAR 1026 F F Q FRGSLSLEHEAT+KAY L ASELC AVKEDFPNAAQ DLTFDIHNNAI+LTKLP++ S+++ T+T+ + K FLNPHDRNGKLL KRFTT +V+ ALS YL+A+++T+ V+ +LQALSD +V +NDLPVIAQAAHWSVICQAMEGHVRH+L+SGWSLP LK +PDMSM+V+++VPYWLPR+EAVPNSFDF GLFLLTAPNMSGKSTLMRAVLACSLL NAGLF P ++AV+PR+D FFLRTASYDIPAEDKSAFALEMDDVR DS E GK T++ T R Sbjct: 2 FFCFFLQVEFRGSLSLEHEATKKAYGLLHRTASELCTAVKEDFPNAAQ--------------DLTFDIHNNAIFLTKLPAN----SNNAATRTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPKFLNPHDRNGKLLPKRFTTERVSTALSGYLTAIEETKTAVQSQLQALSDSIVTNNDLPVIAQAAHWSVICQAMEGHVRHALSSGWSLPSLKDLNNPDMSMKVENLVPYWLPRQEAVPNSFDFGGLFLLTAPNMSGKSTLMRAVLACSLLSNAGLFAPCTSAVVPRFDCFFLRTASYDIPAEDKSAFALEMDDVRVMLRDSSDRSLALVDELGKGTSARTTPTTR 339
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: W7TDK9_9STRA (Dna mismatch repair protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDK9_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.490e-60 Identity = 228/794 (28.72%), Postives = 307/794 (38.66%), Query Frame = 1 Query: 10 VFFQGN---FRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKS-------------------------------PADPDMSMQVKDMVPYWLPREEA-VPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPS-----------------------------------SAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR---SDS------------------------------------------------DHP-------------------------------KWTYTLEDGKCTNSLALQTARRYNIPGTIIARAEALSVEFDRICRGAAAATAASRWREEGRAAAAPTAEARGEDWWPSDGKGWGDGPGRARK-------------------IEDAARVVCSIVGCKEKDMAF---------------VPSGYGTPPALEGRSCLYVLRY----AASLTPRNEPRNDLQDRLSSSRGVAAAGAXXXXAGGAKSTAAEEALDAERDGGARSRLDDDCEQAWRGWKEEGGVWFYVGESDVIRARLAQHRNRWGISSTTVASSLSHGKLDAIVVAMENKSSARRYETALIRAMKERGFHLISDKDGSR 1821 VFF+ N FR ++ H + + + +A+ LC+AV +DF G D+T D NNA+ + K+P+ S R + PTA+ E T T +++P DR+ K LS R+TT +V AL++YL A V+ LQ+LS L +DLP + A H +V+ QA HV + GW+LP L S P+ P M++ ++ PYWL R V +S D GLFLLTAPNMSGKSTLMR++ +LLGNAGLF P + VIPR+D FLRTASYD+P+E KSAFALEMDDVR DS D P +WTY LEDG+C +S+A TAR++ IP TI+ARA+ L EFD CRG + +E+G +G W S G G G+G GR +E AA V+ SI + VP G P+LEG +CLYVL Y +A LTP + FYVGE++ R RLAQHR ++ S + L+A+ V + +K+ AR E +I A+ RGF L S+ DG R Sbjct: 188 VFFERNEETFRNTVRPTHPLVLEPFARVKESAAALCRAVAQDFDP---------------GADVTVDPLNNAVMMKKIPAPSFRSPLSPRGPS--PTATSTE----------------TSTGYIHPTDRHRKPLSSRYTTVRVETALNDYLQACGQATVAVRRALQSLSSTL--RSDLPTLITATHMAVVLQAAAAHVAAAKQKGWTLPTLLSFSDSDCDGKEGDRGLSPSTPAVTPASHPLGPPSRPSWRMRLPNLTPYWLSRNSGGVSSSVDLDGLFLLTAPNMSGKSTLMRSIAVAALLGNAGLFVPCMTGKEGFEDVREGGGQGGLCGKRRKFQEGGPGAGRKSVVIPRFDHLFLRTASYDVPSEGKSAFALEMDDVRVLLRDSTSRSLVFLDELGKGTSAREGAALSGALIEALDAVPVTGIFATHLHEIFDLPLQTSDRVRWKRMGFEEDVVEGGEEGPQERRVRWTYQLEDGRCLDSMAWYTARKFGIPETILARAQVLGKEFDASCRGRGDS------KEDG----------KGGGWRDSRG-GLGEGIGRGEDKMREAGCELDRTWVEESMTLEGAAEVLASIFRGYHSSSSNSLPPXXXXXXXXFLRVPPGNEPSPSLEGSACLYVLLYPPPSSALLTPPS--------------------------------------------------------------------FYVGETESARQRLAQHR-----ATHKKKSRIPESDLEALFVPVASKTEARNLEALVINALARRGFPLSSEADGRR 856
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A0G4EAV3_VITBC (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAV3_VITBC) HSP 1 Score: 213 bits (543), Expect = 1.370e-54 Identity = 142/325 (43.69%), Postives = 183/325 (56.31%), Query Frame = 1 Query: 16 FQGNFRGSLSLEHEATQKAYRALDAAASELCKAVKEDF---PNAAQAR--SRKGRCI------FCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKTV-FLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPADPDMSMQVKDMVPYWLPREEA---VPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPSSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR 945 F+G S E +A A + AA L +A+ EDF P + R SR+G + + DLTFDI NNAIYL K P S +S T R AK D ++ + V F++P DRN ++LS R+TT +V+ A+S Y+ A +D V+ L+ LS L+ LP + Q+ H+ VI QA HV SL GW LP LK DMSMQ+ +VPYW+ + V NSFD GL LLTAPNMSGKSTLMRA +LL N GL P +A +PRYD FF+RTA++D+PAE KSAFALEMDD+R Sbjct: 546 FRGKVNPCASSEVDA---AVAKCEEAALALSEAIVEDFFRVPQTLKDRVVSREGEVVDPVLQQMQQKNDLTFDIFNNAIYLKKKPPSNAPDPFTSATA--------------RKGAKLDAKQQQEPPVEFVHPIDRNNRILSNRWTTERVSLAVSRYVEAAEDAAAAVREALRTLSGELLMH--LPTLTQSTHFLVILQAAASHVSASLCKGWCLPTLKPVGGQDMSMQLNGLVPYWMDGRDGILPVANSFDMDGLLLLTAPNMSGKSTLMRATTVAALLANCGLMVPCKSANVPRYDAFFVRTAAFDVPAEGKSAFALEMDDIR 851
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A7S0DLR2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLR2_9EUKA) HSP 1 Score: 200 bits (509), Expect = 2.210e-51 Identity = 126/339 (37.17%), Postives = 174/339 (51.33%), Query Frame = 1 Query: 13 FFQGN---FRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKL----------------KSPADPDMSMQVKD---------MVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPSSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR 945 FFQ N FRG + + YR L A A L +AV++DFP A L D+ NN + L K P S TKTV+++P DRN +++ RFTT V + S Y+SA ++ E V+ +L++L++ + S D+ VI QAAHW V+ ++ H H+ W++P L + P+ S + M+PYW+P +AVPNS G++LLTAPNM+GKSTLMR++LACSLLGN GLF P + A IPRYD +FLR S+D+PAE KSAFA+EMDD+R Sbjct: 65 FFQRNEYKFRGHVLPTLPSILPYYRNLTACAKALMEAVEKDFPADA----------------LHHDVMNNQLVLKKKPKS-------------------------------------TKTVYIHPRDRNKQMMQNRFTTSVVVSLCSGYVSAAEEAEKAVEGQLKSLAEAI--SQDMQVIVQAAHWGVLYHSINLHTHHARRLSWTIPDLEPLPKPVAHRRHEPQHRGDTSPEFSQDLPSIPPPLKLDLMIPYWMPINQAVPNSVTLDGIYLLTAPNMAGKSTLMRSILACSLLGNCGLFVPCTRAFIPRYDSYFLRATSHDVPAEGKSAFAVEMDDLR 348
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A7S3WZB3_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WZB3_EMIHU) HSP 1 Score: 187 bits (475), Expect = 8.380e-48 Identity = 106/254 (41.73%), Postives = 150/254 (59.06%), Query Frame = 1 Query: 181 GRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPADPDMSMQVKDMVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPSSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDV 942 G +L +NAIYL K ++ +S + P AS + L DR GK L R + +++ A YL+A E + E+QAL D L S LP++A AAHW+++ + HV SL GW+LP+L+ D + +++V+ + PYWL + A NSF++RGL+LLTAPNM+GKS+LMR LA +LL NAGL+ P A++PRYDG+FLRTASYD+P+E +S+FA EMDDV Sbjct: 27 GWELVHAHRDNAIYLVKRRATRASAASDAXXXXXXPAAST--------------------SALLPATDRFGKRLEGRHVSARMSEARLRYLAACAGVEEAARREMQALCDTL--SESLPLLAAAAHWALLYSTLSAHVGASLQKGWTLPRLREVEDGERALRVEGVWPYWLSADGAARNSFEWRGLWLLTAPNMAGKSSLMRGTLAAALLANAGLYAPVDDALVPRYDGYFLRTASYDVPSEGRSSFAQEMDDV 258
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A4D9CWC2_9STRA (DNA mismatch repair protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWC2_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.650e-46 Identity = 163/516 (31.59%), Postives = 214/516 (41.47%), Query Frame = 1 Query: 10 VFFQGN---FRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPAD-------------------------------PDMSMQVKDMVPYWLPREEA-VPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPS-----------------------------------SAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR---SDS------------------------------------------------DHP-------------------------------KWTYTLEDGKCTNSLALQTARRYNIPGTIIARAEALSVEFDRICRG 1101 VFF+ N FR ++ H + + + A+ L +AV +DF G D+T D NNA+ + K P+ S R + PTA+ E T T +++P DR+ K LS R+TT +V AL++YL A V+ LQ+LS L +DLP + A H +V+ QA HV + GW+LP L S +D P M++ ++ PYWL R V +S D GLFLLTAPNMSGKSTLMR++ +LLGNAGLF P + VIPR+D FLRTASYD+P+E KSAFALEMDDVR DS D P +WTY LEDG+C +S+A TAR++ IP TI+ARA L EFD CRG Sbjct: 656 VFFERNEETFRNTVRPTHPLVLEPFARVKETAAALSRAVAQDFDP---------------GADVTVDPLNNAVMMKKKPAPSFRSPLSPRGPS--PTATSTE----------------TSTGYIHPTDRHRKPLSSRYTTARVETALNDYLQACGHATVAVRRALQSLSSTL--RSDLPTMITATHMAVVLQAAAAHVAAAKQKGWTLPALLSFSDSDCDGKEGDRGLSPSTPAAPPASHXXXXXXRPSWRMRLPNLTPYWLSRNSGGVSSSVDLDGLFLLTAPNMSGKSTLMRSIAVAALLGNAGLFVPCMTGKEGFEDVREGGGQGGLCGKRTKFQEAGSGAGRKSVVIPRFDHLFLRTASYDVPSEGKSAFALEMDDVRVLLRDSTSRSLVFLDELGKGTSAREGAALSGALIEALDAVPVTGIFATHLHEIFDLPLQTSDRVRWKRMGFEEDVVEGGEEGPQERRVRWTYQLEDGRCLDSMAWYTARKFGIPETILARARVLGGEFDVSCRG 1136
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: B8CFM5_THAPS (Mismatch repair protein MutS (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFM5_THAPS) HSP 1 Score: 186 bits (471), Expect = 1.410e-45 Identity = 157/561 (27.99%), Postives = 226/561 (40.29%), Query Frame = 1 Query: 367 FLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPADPDMSMQVKDMVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTP-SSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR--------------------------------------------------------------------------SDSDHP-KWTYTLEDGKCTNSLALQTARRYNIPGTIIARAEALS-VEFDRICRGAAAATAASRWREEGRAAAAPTAEARGEDWWPSDGKGWGDGPGRARKIEDAARVVCSIVGCKEKDMAFVPSGYGTPPALEGRSCLYVLRYAASLTPRNEPRNDLQDRLSSSRGVAAAGAXXXXAGGAKSTAAEEALDAERDGGARSRLDDDCEQAWRGWKEEGGVWFYVGESDVIRARLAQHRNRWGISSTTVASSLSHGKLDAIVVAMEN-KSSARRYETALIRAMKERGFHLISDKDG 1815 + +P DRNGK+L R+TT +V A+SEY+ A + V L LS LV + L I QA+H ++I H S A GW+ K+ + D + + + PYW+ R +VPN+F+F GLFLLTAPNMSGKSTLMR+ A +LL +GL P + I R+D F+R AS D+P EDKSAF EM DV D+D KWTYTLE+G+CTNSLAL TA ++ +P +I+ RAE L VE+D +T + ++ PT + A ++ +VG + +P + PP+ EG SC+Y+L+ E +YVGE+D + RL+QHR + S+ L A+ + +E K+SAR E+ +I+ + + GF+L S DG Sbjct: 515 YYHPRDRNGKILKTRYTTERVDLAVSEYVDACDNARKEVMSVLTRLSYKLVDGDHLSSILQASHLNLILSTAANHAASSNAKGWNTAKIYDESGDDSAGHFESVWPYWMDRTNSVPNTFEFDGLFLLTAPNMSGKSTLMRSTAAAALLIASGLCAPVGKGSFIRRFDSLFVRGASADVPTEDKSAFGSEMGDVACILRSCGNRSLVFVDEIGRGTSPTDGTSLAGAILENMAERGMSGMFATHLHGILNIPYSSDASSRIRKKRMAICEDNDGQLKWTYTLEEGECTNSLALLTAAKFGLPESILKRAEELKGVEYD------IGSTPSFQYLRS----TTPTTN-----------------------FDRATAILEEVVG-QGTASVHIPPSFMAPPSFEGSSCVYILKIGG--------------------------------------------------------------------ESNNSMYYVGETDSLARRLSQHRAKGDQWSS----------LSAVAIQIEGGKTSARNIESLVIQRLAKSGFNLASVADG 963
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A0M0J965_9EUKA (DNA mismatch repair protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J965_9EUKA) HSP 1 Score: 186 bits (471), Expect = 1.450e-45 Identity = 122/311 (39.23%), Postives = 171/311 (54.98%), Query Frame = 1 Query: 19 QGNFRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKT-VFLNP-HDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPADPDMSMQVKDMVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTPSSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVR 945 +G FR + E A + Y AL+AAA ELC V ED + G+ + D NNAIYL + +GKL S S + +G D G T L P DRN ++L+ R+ + ++ A YL A E VK LQ L D L + +P + AAHW ++ + HV ++L W+LP LK+ +D D ++++ + PYWLP+ A PN+ + GL+LLTAPNM+GKS+LMR++L +LL N+GL P +A +PRYD FFLRT S+D PAE KSAFA EMDD++ Sbjct: 492 EGTFRKLIRRERVAGE--YAALEAAARELCDGVAED--------------VRATGQIVVHDTINNAIYLRR--GTGKLYVRRSAAAAAAYGDSGDGEGDDLGGGDGVRGPGSPPTPAHLEPARDRNKRVLANRYLSVRMREATVRYLEACDCAERAVKEHLQRLCDELAPA--MPTLVTAAHWVLLSTTLAAHVGYALEQRWALPLLKTASDADRMLELEGVWPYWLPQHAATPNTLAWDGLWLLTAPNMAGKSSLMRSMLVAALLANSGLLAPVRSATVPRYDAFFLRTTSFDAPAEGKSAFAQEMDDLQ 782
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Match: A0A1Z5JPR9_FISSO (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPR9_FISSO) HSP 1 Score: 186 bits (471), Expect = 2.230e-45 Identity = 182/689 (26.42%), Postives = 263/689 (38.17%), Query Frame = 1 Query: 13 FFQGN---FRGSLSLEHEATQKAYRALDAAASELCKAVKEDFPNAAQARSRKGRCIFCRGRDLTFDIHNNAIYLTKLPSSGKLRSSSSRTKTNIPTASWNEDGKDRMPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTENTVKLELQALSDVLVRSNDLPVIAQAAHWSVICQAMEGHVRHSLASGWSLPKLKSPADP-DMSMQVKDMVPYWLPREEAVPNSFDFRGLFLLTAPNMSGKSTLMRAVLACSLLGNAGLFTP-SSAAVIPRYDGFFLRTASYDIPAEDKSAFALEMDDVRS-------------------------------------------------------------------------DSDHPKWTYTLEDGKCTNSLALQTARRYNIPGTIIARAEALSVEFDRICRGAAAATAASRWREEGRAAAAPTAEARGEDWWPSDGKG----WGDGPGRARKIEDAARVVCSIVGCKEKDMAFVPSGYGTPPALEGRSCLYVLRYAASLTPRNEPRNDLQDRLSSSRGVAAAGAXXXXAGGAKSTAAEEALDAERDGGARSRLDDDCEQAWRGWKEEGGVWFYVGESDVIRARLAQHRNRWGISSTTVASSLSHGKLDAIVVAMENKSSARRYETALIRAMKERGFHLISDKDGSRVNPS 1833 FF+ N +RG + EA +AY A+ + +L + V EDF ++ K I + DI NN I L ++P K S G K+ + +P DRNGKLL R+TT V AL++Y++A + V L LS L LP I QA+H +++ H + GW++ + P + ++ +K M PYW+ + AV NSFD G+++LTAPNMSGKSTLMR+ A +LL GL P + I R+D F+R AS DIP E KSAF EM D+ + S +WT+ LEDG CTNS+AL+TA + +P +II RA+ LS FD PSD G + G ++D V SI ++ +P Y P +L+GRS +Y+L + TPR +YVGE+D +R+RL QHR + G+ S A ++ A KS AR +E+ L +++ +GF L+S DG + S Sbjct: 740 FFERNEASWRGRV--HEEAVAEAYHAVSECSKKLAEVVAEDFWGSSIQSLSKLENI---RNPVVQDIFNNLIALKEIP---KFCS------------------------------GSDKSRYFHPRDRNGKLLKTRYTTEAVQLALADYIAACDAACSEVSSVLVQLSRTLHDGGHLPAIVQASHANLVLSCAYFHACQANRLGWNVAETFEPTPKKEFALSLKGMWPYWIDKSNAVANSFDLSGIYILTAPNMSGKSTLMRSAAAGALLTACGLCAPVECGSEIRRFDNIFVRGASSDIPTEQKSAFGAEMGDIAAMLRCCGPKSLVFVDELGRGTSPREGTRLAGAIVESMANAGISGIFATHLHDILQLPLNCWNTVALKRMAVDERQSSSARWTFKLEDGVCTNSMALETAAHFGLPSSIIQRAQELSY-FD----------------------------------IPSDNAGSTKNYDIEQGSVSTLQDVVPVAESIT---QQSSIIIPPAYHPPASLDGRSTVYILELDS--TPRK--------------------------------------------------------------------YYVGETDDVRSRLLQHRRKGGMWSNMTA---------IVLPAPGGKSQARVWESRLTQSLASKGFFLVSVSDGRSIRSS 1273 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9323.17107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9323.17107.1 >prot_H-paniculata_contig9323.17107.1 ID=prot_H-paniculata_contig9323.17107.1|Name=mRNA_H-paniculata_contig9323.17107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=507bp MPAKEDEEEGRTKTVFLNPHDRNGKLLSKRFTTRKVTAALSEYLSAVQDTback to top mRNA from alignment at H-paniculata_contig9323:234..9688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9323.17107.1 ID=mRNA_H-paniculata_contig9323.17107.1|Name=mRNA_H-paniculata_contig9323.17107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9455bp|location=Sequence derived from alignment at H-paniculata_contig9323:234..9688+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9323:234..9688+ >mRNA_H-paniculata_contig9323.17107.1 ID=mRNA_H-paniculata_contig9323.17107.1|Name=mRNA_H-paniculata_contig9323.17107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3042bp|location=Sequence derived from alignment at H-paniculata_contig9323:234..9688+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |